RNA–Protein interactions for RNA: ENST00000590704.5

CIRBP-229, Transcript of cold inducible RNA binding protein, human

TSL 2

Gene CIRBP, Length 1,456 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-229	ENST00000590704	PREX2	Q70Z35	1606 aa		33.11	■■■□□ 2.89
CIRBP-229	ENST00000590704	EFCAB2	Q5VUJ9	269 aa		33.09	■■■□□ 2.89
CIRBP-229	ENST00000590704	SUPT6H	Q7KZ85	1726 aa	Known RBP	33.06	■■■□□ 2.88
CIRBP-229	ENST00000590704	CCNB3	Q8WWL7	1395 aa		33.05	■■■□□ 2.88
CIRBP-229	ENST00000590704	APLP2	Q06481	763 aa		33.05	■■■□□ 2.88
CIRBP-229	ENST00000590704	ARHGAP5	Q13017	1502 aa		33.04	■■■□□ 2.88
CIRBP-229	ENST00000590704	RAPGEF3	O95398	923 aa		33.03	■■■□□ 2.88
CIRBP-229	ENST00000590704	FRMPD1	Q5SYB0	1578 aa		33	■■■□□ 2.87
CIRBP-229	ENST00000590704	CFAP74	Q9C0B2	1584 aa		33	■■■□□ 2.87
CIRBP-229	ENST00000590704	ARHGEF12	Q9NZN5	1544 aa		33	■■■□□ 2.87
CIRBP-229	ENST00000590704	SCAPER	Q9BY12	1400 aa		32.99	■■■□□ 2.87
CIRBP-229	ENST00000590704	CFDP1	Q9UEE9	299 aa	Predicted RBP	32.97	■■■□□ 2.87
CIRBP-229	ENST00000590704	ADGRL1	O94910	1474 aa		32.97	■■■□□ 2.87
CIRBP-229	ENST00000590704	ZNF644	Q9H582	1327 aa	Predicted RBP	32.96	■■■□□ 2.87
CIRBP-229	ENST00000590704	SAMD9L	Q8IVG5	1584 aa		32.96	■■■□□ 2.87
CIRBP-229	ENST00000590704	DENND4B	O75064	1496 aa	Predicted RBP	32.94	■■■□□ 2.86
CIRBP-229	ENST00000590704	RICTOR	Q6R327	1708 aa		32.94	■■■□□ 2.86
CIRBP-229	ENST00000590704	ABCC1	P33527	1531 aa		32.91	■■■□□ 2.86
CIRBP-229	ENST00000590704	ZNF777	Q9ULD5	760 aa	Predicted RBP	32.89	■■■□□ 2.86
CIRBP-229	ENST00000590704	TRAPPC8	Q9Y2L5	1435 aa		32.89	■■■□□ 2.86
CIRBP-229	ENST00000590704	ITSN2	Q9NZM3	1697 aa		32.88	■■■□□ 2.85
CIRBP-229	ENST00000590704	POGZ	Q7Z3K3	1410 aa		32.88	■■■□□ 2.85
CIRBP-229	ENST00000590704	AEBP2	Q6ZN18	517 aa	Predicted RBP	32.87	■■■□□ 2.85
CIRBP-229	ENST00000590704	MYOM3	Q5VTT5	1437 aa		32.87	■■■□□ 2.85
CIRBP-229	ENST00000590704	PPARGC1B	Q86YN6	1023 aa	Known RBP	32.86	■■■□□ 2.85
CIRBP-229	ENST00000590704	AFAP1	Q8N556	730 aa		32.86	■■■□□ 2.85
CIRBP-229	ENST00000590704	HNRNPM	P52272	730 aa	Known RBP eCLIP	32.85	■■■□□ 2.85
CIRBP-229	ENST00000590704	KIAA1107	Q9UPP5	1409 aa		32.85	■■■□□ 2.85
CIRBP-229	ENST00000590704	MBD5	Q9P267	1494 aa		32.84	■■■□□ 2.85
CIRBP-229	ENST00000590704	SYCP2	Q9BX26	1530 aa		32.8	■■■□□ 2.84
CIRBP-229	ENST00000590704	MIA2	Q96PC5	1412 aa		32.8	■■■□□ 2.84
CIRBP-229	ENST00000590704	ZMYM4	Q5VZL5	1548 aa		32.8	■■■□□ 2.84
CIRBP-229	ENST00000590704	KDM5C	P41229	1560 aa		32.79	■■■□□ 2.84
CIRBP-229	ENST00000590704	CAMSAP2	Q08AD1	1489 aa		32.76	■■■□□ 2.84
CIRBP-229	ENST00000590704	ZNF518A	Q6AHZ1	1483 aa		32.76	■■■□□ 2.84
CIRBP-229	ENST00000590704	PLEKHH2	Q8IVE3	1493 aa		32.76	■■■□□ 2.83
CIRBP-229	ENST00000590704	YEATS2	Q9ULM3	1422 aa		32.75	■■■□□ 2.83
CIRBP-229	ENST00000590704	FGD6	Q6ZV73	1430 aa		32.72	■■■□□ 2.83
CIRBP-229	ENST00000590704	MAGI2	Q86UL8	1455 aa		32.69	■■■□□ 2.82
CIRBP-229	ENST00000590704	MLH3	Q9UHC1	1453 aa		32.69	■■■□□ 2.82
CIRBP-229	ENST00000590704	TCOF1	Q13428	1488 aa	Known RBP	32.68	■■■□□ 2.82
CIRBP-229	ENST00000590704	PTPN23	Q9H3S7	1636 aa		32.65	■■■□□ 2.82
CIRBP-229	ENST00000590704	KIDINS220	Q9ULH0	1771 aa		32.64	■■■□□ 2.81
CIRBP-229	ENST00000590704	ARHGEF5	Q12774	1597 aa		32.62	■■■□□ 2.81
CIRBP-229	ENST00000590704	ARHGEF40	Q8TER5	1519 aa		32.62	■■■□□ 2.81
CIRBP-229	ENST00000590704	ZFYVE16	Q7Z3T8	1539 aa		32.62	■■■□□ 2.81
CIRBP-229	ENST00000590704	HECW2	Q9P2P5	1572 aa		32.61	■■■□□ 2.81
CIRBP-229	ENST00000590704	SIGLEC1	Q9BZZ2	1709 aa		32.6	■■■□□ 2.81
CIRBP-229	ENST00000590704	RSPH4A	Q5TD94	716 aa		32.59	■■■□□ 2.81
CIRBP-229	ENST00000590704	CCDC141	Q6ZP82	1450 aa		32.58	■■■□□ 2.81
CIRBP-229	ENST00000590704	SPAG9	O60271	1321 aa	Known RBP	32.57	■■■□□ 2.8
CIRBP-229	ENST00000590704	INO80	Q9ULG1	1556 aa	Predicted RBP	32.56	■■■□□ 2.8
CIRBP-229	ENST00000590704	DIP2C	Q9Y2E4	1556 aa		32.56	■■■□□ 2.8
CIRBP-229	ENST00000590704	ABCA6	Q8N139	1617 aa		32.55	■■■□□ 2.8
CIRBP-229	ENST00000590704	ATP10A	O60312	1499 aa		32.55	■■■□□ 2.8
CIRBP-229	ENST00000590704	ABCC5	O15440	1437 aa		32.55	■■■□□ 2.8
CIRBP-229	ENST00000590704	RTEL1-TNFRSF6B	F6WH68	1400 aa		32.52	■■■□□ 2.8
CIRBP-229	ENST00000590704	ATP7A	Q04656	1500 aa		32.51	■■■□□ 2.8
CIRBP-229	ENST00000590704	KDM4F	A0A1W2PPD8	638 aa		32.49	■■■□□ 2.79
CIRBP-229	ENST00000590704	RRBP1	Q9P2E9	1410 aa	Known RBP	32.47	■■■□□ 2.79
CIRBP-229	ENST00000590704	DAPK1	P53355	1430 aa		32.46	■■■□□ 2.79
CIRBP-229	ENST00000590704	DNMT1	P26358	1616 aa	Known RBP	32.46	■■■□□ 2.79
CIRBP-229	ENST00000590704	MAST1	Q9Y2H9	1570 aa		32.45	■■■□□ 2.79
CIRBP-229	ENST00000590704	C9orf84	Q5VXU9	1444 aa		32.45	■■■□□ 2.79
CIRBP-229	ENST00000590704	FAM50A	Q14320	339 aa	Known RBP	32.44	■■■□□ 2.78
CIRBP-229	ENST00000590704	RERE	Q9P2R6	1566 aa		32.44	■■■□□ 2.78
CIRBP-229	ENST00000590704	PTPRK	Q15262	1439 aa		32.44	■■■□□ 2.78
CIRBP-229	ENST00000590704	MYT1L	Q9UL68	1186 aa		32.43	■■■□□ 2.78
CIRBP-229	ENST00000590704	TSPY4	P0CV99	314 aa		32.42	■■■□□ 2.78
CIRBP-229	ENST00000590704	TSPY10	P0CW01	314 aa		32.42	■■■□□ 2.78
CIRBP-229	ENST00000590704	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	32.42	■■■□□ 2.78	5e-6	■■■□□ 18.7
CIRBP-229	ENST00000590704	CROCC2	H7BZ55	1655 aa		32.39	■■■□□ 2.77
CIRBP-229	ENST00000590704	SHANK2	Q9UPX8	1470 aa		32.38	■■■□□ 2.77
CIRBP-229	ENST00000590704	PLXNC1	O60486	1568 aa		32.36	■■■□□ 2.77
CIRBP-229	ENST00000590704	AGL	P35573	1532 aa		32.36	■■■□□ 2.77
CIRBP-229	ENST00000590704	A2M	P01023	1474 aa		32.35	■■■□□ 2.77
CIRBP-229	ENST00000590704	ADGB	Q8N7X0	1667 aa		32.35	■■■□□ 2.77
CIRBP-229	ENST00000590704	DHX29	Q7Z478	1369 aa	Known RBP	32.33	■■■□□ 2.77
CIRBP-229	ENST00000590704	BCORL1	Q5H9F3	1711 aa		32.33	■■■□□ 2.77
CIRBP-229	ENST00000590704	ARID4B	Q4LE39	1312 aa	Predicted RBP	32.31	■■■□□ 2.76
CIRBP-229	ENST00000590704	CHIC2	Q9UKJ5	165 aa		32.31	■■■□□ 2.76
CIRBP-229	ENST00000590704	ADAMTSL3	P82987	1691 aa		32.31	■■■□□ 2.76
CIRBP-229	ENST00000590704	NCOA1	Q15788	1441 aa		32.29	■■■□□ 2.76
CIRBP-229	ENST00000590704	ADGRL2	O95490	1459 aa		32.27	■■■□□ 2.76
CIRBP-229	ENST00000590704	MLEC	Q14165	292 aa		32.23	■■■□□ 2.75
CIRBP-229	ENST00000590704	RRP7BP	Q9NSQ0	103 aa		32.23	■■■□□ 2.75
CIRBP-229	ENST00000590704	KIF15	Q9NS87	1388 aa		32.21	■■■□□ 2.75
CIRBP-229	ENST00000590704	ANKRD30A	Q9BXX3	1397 aa		32.17	■■■□□ 2.74
CIRBP-229	ENST00000590704	ITGAE	P38570	1179 aa		32.17	■■■□□ 2.74
CIRBP-229	ENST00000590704	MADD	Q8WXG6	1647 aa		32.17	■■■□□ 2.74
CIRBP-229	ENST00000590704	DUOX2	Q9NRD8	1548 aa		32.17	■■■□□ 2.74
CIRBP-229	ENST00000590704	ROCK1	Q13464	1354 aa		32.15	■■■□□ 2.74
CIRBP-229	ENST00000590704	KIF3B	O15066	747 aa		32.14	■■■□□ 2.74
CIRBP-229	ENST00000590704	GGT6	Q6P531	493 aa		32.09	■■■□□ 2.73
CIRBP-229	ENST00000590704	ERBIN	Q96RT1	1412 aa		32.07	■■■□□ 2.72
CIRBP-229	ENST00000590704	PTPRM	P28827	1452 aa		32.07	■■■□□ 2.72
CIRBP-229	ENST00000590704	MROH1	Q8NDA8	1641 aa		32.06	■■■□□ 2.72
CIRBP-229	ENST00000590704	EIF2AK4	Q9P2K8	1649 aa	Known RBP	32.06	■■■□□ 2.72
CIRBP-229	ENST00000590704	FER1L4	A9Z1Z3	1794 aa		32.05	■■■□□ 2.72
CIRBP-229	ENST00000590704	RIMS1	Q86UR5	1692 aa	Known RBP	32.04	■■■□□ 2.72

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms