RNA–Protein interactions for RNA: ENST00000590608.1

ATP9B-223, Transcript of ATPase phospholipid transporting 9B (putative), humanhuman

TSL 3

Gene ATP9B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP9B-223ENST00000590608 PCDH10Q9P2E7 1040 aa10.62□□□□□ -0.71
ATP9B-223ENST00000590608 BOLA1Q9Y3E2 137 aa10.62□□□□□ -0.71
ATP9B-223ENST00000590608 NLRP6P59044 892 aa10.61□□□□□ -0.71
ATP9B-223ENST00000590608 TMEM121BQ9BXQ6 578 aaPredicted RBP10.61□□□□□ -0.71
ATP9B-223ENST00000590608 NBR1Q14596 966 aa10.6□□□□□ -0.71
ATP9B-223ENST00000590608 SLAIN1Q8ND83 568 aa10.6□□□□□ -0.71
ATP9B-223ENST00000590608 MICALL2Q8IY33 904 aa10.59□□□□□ -0.71
ATP9B-223ENST00000590608 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.59□□□□□ -0.71
ATP9B-223ENST00000590608 C3orf67Q6ZVT6 689 aa10.58□□□□□ -0.72
ATP9B-223ENST00000590608 LCE2DQ5TA82 110 aaPredicted RBP10.57□□□□□ -0.72
ATP9B-223ENST00000590608 RYDENQ9NUL5 291 aaKnown RBP10.55□□□□□ -0.72
ATP9B-223ENST00000590608 PPP1R37O75864 691 aa10.53□□□□□ -0.72
ATP9B-223ENST00000590608 TMEM92Q6UXU6 159 aa10.53□□□□□ -0.72
ATP9B-223ENST00000590608 G3V3G9 751 aa10.51□□□□□ -0.73
ATP9B-223ENST00000590608 FAM163AQ96GL9 167 aaPredicted RBP10.44□□□□□ -0.74
ATP9B-223ENST00000590608 ST18O60284 1047 aa10.42□□□□□ -0.74
ATP9B-223ENST00000590608 HOXB3P14651 431 aaPredicted RBP10.41□□□□□ -0.74
ATP9B-223ENST00000590608 KIF3CO14782 793 aa10.4□□□□□ -0.74
ATP9B-223ENST00000590608 SNPHO15079 494 aa10.37□□□□□ -0.75
ATP9B-223ENST00000590608 CADPS2Q86UW7 1296 aa10.37□□□□□ -0.75
ATP9B-223ENST00000590608 C2orf72A6NCS6 295 aa10.36□□□□□ -0.75
ATP9B-223ENST00000590608 DOK7Q18PE1 504 aa10.28□□□□□ -0.76
ATP9B-223ENST00000590608 TMC2Q8TDI7 906 aa10.28□□□□□ -0.76
ATP9B-223ENST00000590608 MARVELD3Q96A59 401 aa10.28□□□□□ -0.76
ATP9B-223ENST00000590608 KCNV2Q8TDN2 545 aa10.27□□□□□ -0.77
ATP9B-223ENST00000590608 CRISPLD2Q9H0B8 497 aa10.27□□□□□ -0.77
ATP9B-223ENST00000590608 NCKAP5LQ9HCH0 1330 aa10.26□□□□□ -0.77
ATP9B-223ENST00000590608 GPHNQ9NQX3 736 aaPredicted RBP10.25□□□□□ -0.77
ATP9B-223ENST00000590608 HOXB1P14653 301 aaPredicted RBP10.24□□□□□ -0.77
ATP9B-223ENST00000590608 FOXK1P85037 733 aa10.24□□□□□ -0.77
ATP9B-223ENST00000590608 P3H3Q8IVL6 736 aa10.24□□□□□ -0.77
ATP9B-223ENST00000590608 DSG2Q14126 1118 aa10.23□□□□□ -0.77
ATP9B-223ENST00000590608 GPR153Q6NV75 609 aa10.23□□□□□ -0.77
ATP9B-223ENST00000590608 ZNF710Q8N1W2 664 aa10.23□□□□□ -0.77
ATP9B-223ENST00000590608 WDR70Q9NW82 654 aa10.22□□□□□ -0.77
ATP9B-223ENST00000590608 POTEB3A0JP26 581 aa10.21□□□□□ -0.77
ATP9B-223ENST00000590608 EMP3P54852 163 aa10.21□□□□□ -0.77
ATP9B-223ENST00000590608 POTEBQ6S5H4 581 aa10.21□□□□□ -0.77
ATP9B-223ENST00000590608 ZSWIM6Q9HCJ5 1215 aa10.21□□□□□ -0.77
ATP9B-223ENST00000590608 RIMBP2O15034 1052 aa10.2□□□□□ -0.78
ATP9B-223ENST00000590608 MFSD10Q14728 455 aa10.2□□□□□ -0.78
ATP9B-223ENST00000590608 PLPP6Q8IY26 295 aa10.2□□□□□ -0.78
ATP9B-223ENST00000590608 KHSRPQ92945 711 aaKnown RBP eCLIP10.2□□□□□ -0.78
ATP9B-223ENST00000590608 SLC34A2O95436 690 aa10.19□□□□□ -0.78
ATP9B-223ENST00000590608 TIMELESSQ9UNS1 1208 aa10.19□□□□□ -0.78
ATP9B-223ENST00000590608 PDE4AP27815 886 aa10.18□□□□□ -0.78
ATP9B-223ENST00000590608 ARSIQ5FYB1 569 aa10.18□□□□□ -0.78
ATP9B-223ENST00000590608 TULP1O00294 542 aaPredicted RBP10.17□□□□□ -0.78
ATP9B-223ENST00000590608 LMOD2Q6P5Q4 547 aa10.17□□□□□ -0.78
ATP9B-223ENST00000590608 LARP6Q9BRS8 491 aaKnown RBP10.16□□□□□ -0.78
ATP9B-223ENST00000590608 FAM205CA6NFA0 338 aa10.15□□□□□ -0.78
ATP9B-223ENST00000590608 PPP1R15BQ5SWA1 713 aa10.15□□□□□ -0.78
ATP9B-223ENST00000590608 HS3ST6Q96QI5 342 aa10.15□□□□□ -0.78
ATP9B-223ENST00000590608 PCDHGA4Q9Y5G9 962 aa10.15□□□□□ -0.78
ATP9B-223ENST00000590608 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.14□□□□□ -0.79
ATP9B-223ENST00000590608 CDAN1Q8IWY9 1227 aa10.14□□□□□ -0.79
ATP9B-223ENST00000590608 GTF3C3Q9Y5Q9 886 aa10.14□□□□□ -0.79
ATP9B-223ENST00000590608 PTCD2Q8WV60 388 aaKnown RBP10.12□□□□□ -0.79
ATP9B-223ENST00000590608 DDX27Q96GQ7 796 aaKnown RBP10.12□□□□□ -0.79
ATP9B-223ENST00000590608 KDM4FA0A1W2PPD8 638 aa10.11□□□□□ -0.79
ATP9B-223ENST00000590608 NUDT7P0C024 238 aa10.11□□□□□ -0.79
ATP9B-223ENST00000590608 CAMK2BQ13554 666 aa10.09□□□□□ -0.79
ATP9B-223ENST00000590608 ERBB3P21860 1342 aa10.08□□□□□ -0.8
ATP9B-223ENST00000590608 E2F4Q16254 413 aa10.08□□□□□ -0.8
ATP9B-223ENST00000590608 VARS2Q5ST30 1063 aaKnown RBP10.08□□□□□ -0.8
ATP9B-223ENST00000590608 OXER1Q8TDS5 423 aa10.08□□□□□ -0.8
ATP9B-223ENST00000590608 KRTAP3-3Q9BYR6 98 aa10.07□□□□□ -0.8
ATP9B-223ENST00000590608 KRTAP3-2Q9BYR7 98 aa10.07□□□□□ -0.8
ATP9B-223ENST00000590608 ZNF316A6NFI3 1004 aaPredicted RBP10.06□□□□□ -0.8
ATP9B-223ENST00000590608 UPF1Q92900 1129 aaKnown RBP eCLIP10.06□□□□□ -0.8
ATP9B-223ENST00000590608 TMEM132AQ24JP5 1023 aa10.05□□□□□ -0.8
ATP9B-223ENST00000590608 EMILIN3Q9NT22 766 aa10.05□□□□□ -0.8
ATP9B-223ENST00000590608 SEMA3EO15041 775 aa10.04□□□□□ -0.8
ATP9B-223ENST00000590608 LHX6Q9UPM6 363 aa10.04□□□□□ -0.8
ATP9B-223ENST00000590608 ARHGEF1Q92888 912 aaKnown RBP10.03□□□□□ -0.8
ATP9B-223ENST00000590608 ARIH1Q9Y4X5 557 aaPredicted RBP10.03□□□□□ -0.8
ATP9B-223ENST00000590608 ZC3H15Q8WU90 426 aaKnown RBP10□□□□□ -0.81
ATP9B-223ENST00000590608 BRPF1P55201 1214 aaPredicted RBP9.98□□□□□ -0.81
ATP9B-223ENST00000590608 ZNF687Q8N1G0 1237 aa9.98□□□□□ -0.81
ATP9B-223ENST00000590608 TESPA1A2RU30 521 aaPredicted RBP9.97□□□□□ -0.81
ATP9B-223ENST00000590608 MMRN1Q13201 1228 aa9.97□□□□□ -0.81
ATP9B-223ENST00000590608 POTEEQ6S8J3 1075 aa9.97□□□□□ -0.81
ATP9B-223ENST00000590608 TBC1D12O60347 775 aa9.96□□□□□ -0.82
ATP9B-223ENST00000590608 SLC24A3Q9HC58 644 aa9.96□□□□□ -0.82
ATP9B-223ENST00000590608 EVI5O60447 810 aa9.93□□□□□ -0.82
ATP9B-223ENST00000590608 DPYSL4O14531 572 aa9.92□□□□□ -0.82
ATP9B-223ENST00000590608 NEUROD2Q15784 382 aa9.92□□□□□ -0.82
ATP9B-223ENST00000590608 ANO8Q9HCE9 1232 aaPredicted RBP9.92□□□□□ -0.82
ATP9B-223ENST00000590608 MAP3K9P80192 1104 aa9.9□□□□□ -0.82
ATP9B-223ENST00000590608 SPNS2Q8IVW8 549 aa9.9□□□□□ -0.82
ATP9B-223ENST00000590608 PSDA5PKW4 1024 aaPredicted RBP9.89□□□□□ -0.83
ATP9B-223ENST00000590608 AXIN2Q9Y2T1 843 aa9.89□□□□□ -0.83
ATP9B-223ENST00000590608 FOSBP53539 338 aa9.88□□□□□ -0.83
ATP9B-223ENST00000590608 PDIA6Q15084 440 aa9.88□□□□□ -0.83
ATP9B-223ENST00000590608 C14orf37Q86TY3 774 aa9.88□□□□□ -0.83
ATP9B-223ENST00000590608 PPP4R3BQ5MIZ7 849 aa9.87□□□□□ -0.83
ATP9B-223ENST00000590608 SPDYE16A6NNV3 312 aaPredicted RBP9.86□□□□□ -0.83
ATP9B-223ENST00000590608 ZNF454Q8N9F8 522 aa9.86□□□□□ -0.83
ATP9B-223ENST00000590608 JPH4Q96JJ6 628 aa9.86□□□□□ -0.83
ATP9B-223ENST00000590608 PBX2P40425 430 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms