RNA–Protein interactions for RNA: ENST00000590485.1

SAFB-208, Transcript of scaffold attachment factor B, humanhuman

TSL 3

Gene SAFB, Length 548 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-208ENST00000590485 PDCD7Q8N8D1 485 aaKnown RBP10.69□□□□□ -0.7
SAFB-208ENST00000590485 VSIG10Q8N0Z9 540 aa10.68□□□□□ -0.7
SAFB-208ENST00000590485 HS3ST6Q96QI5 342 aa10.68□□□□□ -0.7
SAFB-208ENST00000590485 EFCAB3Q8N7B9 438 aa10.66□□□□□ -0.7
SAFB-208ENST00000590485 TSHZ2Q9NRE2 1034 aa10.66□□□□□ -0.7
SAFB-208ENST00000590485 SOX12O15370 315 aa10.64□□□□□ -0.71
SAFB-208ENST00000590485 FAM205CA6NFA0 338 aa10.63□□□□□ -0.71
SAFB-208ENST00000590485 NLRP6P59044 892 aa10.63□□□□□ -0.71
SAFB-208ENST00000590485 MFRPQ9BY79 579 aa10.63□□□□□ -0.71
SAFB-208ENST00000590485 MKRN3Q13064 507 aaKnown RBP10.61□□□□□ -0.71
SAFB-208ENST00000590485 C3orf67Q6ZVT6 689 aa10.6□□□□□ -0.71
SAFB-208ENST00000590485 PHF8Q9UPP1 1060 aa10.59□□□□□ -0.71
SAFB-208ENST00000590485 FBXO22Q8NEZ5 403 aa10.56□□□□□ -0.72
SAFB-208ENST00000590485 KDM2AQ9Y2K7 1162 aa10.55□□□□□ -0.72
SAFB-208ENST00000590485 L3MBTL3Q96JM7 780 aaPredicted RBP10.53□□□□□ -0.72
SAFB-208ENST00000590485 HOXB3P14651 431 aaPredicted RBP10.5□□□□□ -0.73
SAFB-208ENST00000590485 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.5□□□□□ -0.731e-10■■■□□ 16.4
SAFB-208ENST00000590485 ILDR1Q86SU0 546 aaPredicted RBP10.48□□□□□ -0.73
SAFB-208ENST00000590485 MS4A4AQ96JQ5 239 aa10.48□□□□□ -0.73
SAFB-208ENST00000590485 PPP1R37O75864 691 aa10.47□□□□□ -0.73
SAFB-208ENST00000590485 RNF166Q96A37 237 aaPredicted RBP10.45□□□□□ -0.74
SAFB-208ENST00000590485 DPY19L2Q6NUT2 758 aa10.43□□□□□ -0.74
SAFB-208ENST00000590485 HOXB1P14653 301 aaPredicted RBP10.42□□□□□ -0.74
SAFB-208ENST00000590485 CADPS2Q86UW7 1296 aa10.42□□□□□ -0.74
SAFB-208ENST00000590485 BCANQ96GW7 911 aa10.4□□□□□ -0.74
SAFB-208ENST00000590485 WDR70Q9NW82 654 aa10.4□□□□□ -0.74
SAFB-208ENST00000590485 G3V3G9 751 aa10.37□□□□□ -0.75
SAFB-208ENST00000590485 ERBB3P21860 1342 aa10.35□□□□□ -0.75
SAFB-208ENST00000590485 MYT1LQ9UL68 1186 aa10.35□□□□□ -0.75
SAFB-208ENST00000590485 BOLA1Q9Y3E2 137 aa10.34□□□□□ -0.75
SAFB-208ENST00000590485 P3H3Q8IVL6 736 aa10.33□□□□□ -0.76
SAFB-208ENST00000590485 ZNF710Q8N1W2 664 aa10.33□□□□□ -0.76
SAFB-208ENST00000590485 PDE4AP27815 886 aa10.32□□□□□ -0.76
SAFB-208ENST00000590485 MICALL2Q8IY33 904 aa10.32□□□□□ -0.76
SAFB-208ENST00000590485 NBR1Q14596 966 aa10.31□□□□□ -0.76
SAFB-208ENST00000590485 VARS2Q5ST30 1063 aaKnown RBP10.31□□□□□ -0.76
SAFB-208ENST00000590485 DOK7Q18PE1 504 aa10.3□□□□□ -0.76
SAFB-208ENST00000590485 NCKAP5LQ9HCH0 1330 aa10.3□□□□□ -0.76
SAFB-208ENST00000590485 LARP6Q9BRS8 491 aaKnown RBP10.29□□□□□ -0.76
SAFB-208ENST00000590485 CRISPLD2Q9H0B8 497 aa10.28□□□□□ -0.76
SAFB-208ENST00000590485 DDX27Q96GQ7 796 aaKnown RBP10.26□□□□□ -0.77
SAFB-208ENST00000590485 MFSD10Q14728 455 aa10.25□□□□□ -0.77
SAFB-208ENST00000590485 TMC2Q8TDI7 906 aa10.25□□□□□ -0.77
SAFB-208ENST00000590485 E2F4Q16254 413 aa10.24□□□□□ -0.77
SAFB-208ENST00000590485 ZNF687Q8N1G0 1237 aa10.24□□□□□ -0.77
SAFB-208ENST00000590485 KCNV2Q8TDN2 545 aa10.23□□□□□ -0.77
SAFB-208ENST00000590485 GPHNQ9NQX3 736 aaPredicted RBP10.22□□□□□ -0.77
SAFB-208ENST00000590485 RIMBP2O15034 1052 aa10.2□□□□□ -0.78
SAFB-208ENST00000590485 PTGER2P43116 358 aa10.2□□□□□ -0.78
SAFB-208ENST00000590485 PPP1R15BQ5SWA1 713 aa10.2□□□□□ -0.78
SAFB-208ENST00000590485 TMEM92Q6UXU6 159 aa10.2□□□□□ -0.78
SAFB-208ENST00000590485 GPR153Q6NV75 609 aa10.18□□□□□ -0.78
SAFB-208ENST00000590485 ZSWIM6Q9HCJ5 1215 aa10.18□□□□□ -0.78
SAFB-208ENST00000590485 ARHGEF1Q92888 912 aaKnown RBP10.17□□□□□ -0.78
SAFB-208ENST00000590485 C2orf72A6NCS6 295 aa10.15□□□□□ -0.78
SAFB-208ENST00000590485 DSG2Q14126 1118 aa10.15□□□□□ -0.78
SAFB-208ENST00000590485 FOXK1P85037 733 aa10.14□□□□□ -0.79
SAFB-208ENST00000590485 CAMK2BQ13554 666 aa10.13□□□□□ -0.79
SAFB-208ENST00000590485 KIF3CO14782 793 aa10.12□□□□□ -0.79
SAFB-208ENST00000590485 PLPP6Q8IY26 295 aa10.11□□□□□ -0.79
SAFB-208ENST00000590485 ANKRD13DQ6ZTN6 518 aa10.1□□□□□ -0.79
SAFB-208ENST00000590485 ARIH1Q9Y4X5 557 aaPredicted RBP10.08□□□□□ -0.8
SAFB-208ENST00000590485 TULP1O00294 542 aaPredicted RBP10.07□□□□□ -0.8
SAFB-208ENST00000590485 LSM11P83369 360 aaKnown RBP eCLIP10.07□□□□□ -0.8
SAFB-208ENST00000590485 ARSIQ5FYB1 569 aa10.05□□□□□ -0.8
SAFB-208ENST00000590485 EMILIN3Q9NT22 766 aa10.04□□□□□ -0.8
SAFB-208ENST00000590485 ZNF316A6NFI3 1004 aaPredicted RBP10.03□□□□□ -0.8
SAFB-208ENST00000590485 DPYSL4O14531 572 aa10.03□□□□□ -0.8
SAFB-208ENST00000590485 KHSRPQ92945 711 aaKnown RBP eCLIP10.03□□□□□ -0.8
SAFB-208ENST00000590485 PLA2G2EQ9NZK7 142 aa10.03□□□□□ -0.8
SAFB-208ENST00000590485 SPDYE16A6NNV3 312 aaPredicted RBP10.01□□□□□ -0.81
SAFB-208ENST00000590485 SEMA3EO15041 775 aa10.01□□□□□ -0.81
SAFB-208ENST00000590485 TPRNQ4KMQ1 711 aa10.01□□□□□ -0.81
SAFB-208ENST00000590485 UPF1Q92900 1129 aaKnown RBP eCLIP10□□□□□ -0.81
SAFB-208ENST00000590485 TESPA1A2RU30 521 aaPredicted RBP9.99□□□□□ -0.81
SAFB-208ENST00000590485 MAP3K9P80192 1104 aa9.99□□□□□ -0.81
SAFB-208ENST00000590485 SMYD5Q6GMV2 418 aa9.99□□□□□ -0.81
SAFB-208ENST00000590485 PDIA6Q15084 440 aa9.98□□□□□ -0.81
SAFB-208ENST00000590485 POTEEQ6S8J3 1075 aa9.98□□□□□ -0.81
SAFB-208ENST00000590485 OXER1Q8TDS5 423 aa9.96□□□□□ -0.82
SAFB-208ENST00000590485 TBC1D12O60347 775 aa9.95□□□□□ -0.82
SAFB-208ENST00000590485 LMOD2Q6P5Q4 547 aa9.95□□□□□ -0.82
SAFB-208ENST00000590485 PRKCSHP14314 528 aaPredicted RBP9.94□□□□□ -0.82
SAFB-208ENST00000590485 SLC34A2O95436 690 aa9.93□□□□□ -0.82
SAFB-208ENST00000590485 PBX2P40425 430 aa9.93□□□□□ -0.82
SAFB-208ENST00000590485 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.93□□□□□ -0.82
SAFB-208ENST00000590485 PTCD2Q8WV60 388 aaKnown RBP9.93□□□□□ -0.82
SAFB-208ENST00000590485 HCSTQ9UBK5 93 aa9.93□□□□□ -0.82
SAFB-208ENST00000590485 AXIN2Q9Y2T1 843 aa9.91□□□□□ -0.82
SAFB-208ENST00000590485 MLLT3P42568 568 aaPredicted RBP9.9□□□□□ -0.82
SAFB-208ENST00000590485 EVI5O60447 810 aa9.89□□□□□ -0.83
SAFB-208ENST00000590485 NUDT7P0C024 238 aa9.87□□□□□ -0.83
SAFB-208ENST00000590485 PCDHGA4Q9Y5G9 962 aa9.87□□□□□ -0.83
SAFB-208ENST00000590485 GRXCR2A6NFK2 248 aa9.85□□□□□ -0.83
SAFB-208ENST00000590485 LHX6Q9UPM6 363 aa9.85□□□□□ -0.83
SAFB-208ENST00000590485 ADGRD1Q6QNK2 874 aa9.83□□□□□ -0.84
SAFB-208ENST00000590485 DDX12PQ92771 950 aa9.83□□□□□ -0.84
SAFB-208ENST00000590485 RBM26Q5T8P6 1007 aaKnown RBP9.81□□□□□ -0.84
SAFB-208ENST00000590485 GPIHBP1Q8IV16 184 aa9.81□□□□□ -0.84
SAFB-208ENST00000590485 ZC3H15Q8WU90 426 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms