RNA–Protein interactions for RNA: ENST00000590472.5

GCDH-211, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-211ENST00000590472 SCAPERQ9BY12 1400 aa25.65■■□□□ 1.7
GCDH-211ENST00000590472 PREX2Q70Z35 1606 aa25.65■■□□□ 1.7
GCDH-211ENST00000590472 ZMYM4Q5VZL5 1548 aa25.64■■□□□ 1.7
GCDH-211ENST00000590472 POGZQ7Z3K3 1410 aa25.63■■□□□ 1.69
GCDH-211ENST00000590472 CDC42BPAQ5VT25 1732 aa25.62■■□□□ 1.69
GCDH-211ENST00000590472 ARHGEF40Q8TER5 1519 aa25.62■■□□□ 1.69
GCDH-211ENST00000590472 MTUS2Q5JR59 1369 aa25.56■■□□□ 1.68
GCDH-211ENST00000590472 VPS8Q8N3P4 1428 aa25.55■■□□□ 1.68
GCDH-211ENST00000590472 MAGI2Q86UL8 1455 aa25.55■■□□□ 1.68
GCDH-211ENST00000590472 ZFYVE16Q7Z3T8 1539 aa25.55■■□□□ 1.68
GCDH-211ENST00000590472 YEATS2Q9ULM3 1422 aa25.54■■□□□ 1.68
GCDH-211ENST00000590472 GPATCH8Q9UKJ3 1502 aaKnown RBP25.54■■□□□ 1.68
GCDH-211ENST00000590472 EHBP1L1Q8N3D4 1523 aa25.53■■□□□ 1.68
GCDH-211ENST00000590472 ABCC1P33527 1531 aa25.53■■□□□ 1.68
GCDH-211ENST00000590472 ZNF518AQ6AHZ1 1483 aa25.52■■□□□ 1.68
GCDH-211ENST00000590472 KDM5CP41229 1560 aa25.52■■□□□ 1.68
GCDH-211ENST00000590472 ARHGEF12Q9NZN5 1544 aa25.51■■□□□ 1.67
GCDH-211ENST00000590472 SIGLEC1Q9BZZ2 1709 aa25.49■■□□□ 1.67
GCDH-211ENST00000590472 ITSN2Q9NZM3 1697 aa25.49■■□□□ 1.67
GCDH-211ENST00000590472 TIAM1Q13009 1591 aa25.49■■□□□ 1.67
GCDH-211ENST00000590472 BCORL1Q5H9F3 1711 aa25.49■■□□□ 1.67
GCDH-211ENST00000590472 ADAMTSL3P82987 1691 aa25.48■■□□□ 1.67
GCDH-211ENST00000590472 AFAP1Q8N556 730 aa25.48■■□□□ 1.67
GCDH-211ENST00000590472 SAMD9LQ8IVG5 1584 aa25.48■■□□□ 1.67
GCDH-211ENST00000590472 CCNB3Q8WWL7 1395 aa25.46■■□□□ 1.67
GCDH-211ENST00000590472 TRAPPC8Q9Y2L5 1435 aa25.46■■□□□ 1.67
GCDH-211ENST00000590472 ARID4BQ4LE39 1312 aaPredicted RBP25.44■■□□□ 1.66
GCDH-211ENST00000590472 HECW2Q9P2P5 1572 aa25.44■■□□□ 1.66
GCDH-211ENST00000590472 ZNF777Q9ULD5 760 aaPredicted RBP25.42■■□□□ 1.66
GCDH-211ENST00000590472 ATP10AO60312 1499 aa25.41■■□□□ 1.66
GCDH-211ENST00000590472 CFDP1Q9UEE9 299 aaPredicted RBP25.41■■□□□ 1.66
GCDH-211ENST00000590472 MLH3Q9UHC1 1453 aa25.4■■□□□ 1.66
GCDH-211ENST00000590472 SUPT6HQ7KZ85 1726 aaKnown RBP25.4■■□□□ 1.66
GCDH-211ENST00000590472 SYCP2Q9BX26 1530 aa25.4■■□□□ 1.66
GCDH-211ENST00000590472 C9orf84Q5VXU9 1444 aa25.38■■□□□ 1.65
GCDH-211ENST00000590472 MAP3K1Q13233 1512 aa25.38■■□□□ 1.65
GCDH-211ENST00000590472 MADDQ8WXG6 1647 aa25.38■■□□□ 1.65
GCDH-211ENST00000590472 NCOA2Q15596 1464 aa25.38■■□□□ 1.65
GCDH-211ENST00000590472 DIP2CQ9Y2E4 1556 aa25.38■■□□□ 1.65
GCDH-211ENST00000590472 LRRC9Q6ZRR7 1453 aa25.37■■□□□ 1.65
GCDH-211ENST00000590472 ABCA6Q8N139 1617 aa25.37■■□□□ 1.65
GCDH-211ENST00000590472 KIAA1107Q9UPP5 1409 aa25.36■■□□□ 1.65
GCDH-211ENST00000590472 PLEKHH2Q8IVE3 1493 aa25.35■■□□□ 1.65
GCDH-211ENST00000590472 HNRNPMP52272 730 aaKnown RBP eCLIP25.35■■□□□ 1.65
GCDH-211ENST00000590472 KIDINS220Q9ULH0 1771 aa25.35■■□□□ 1.65
GCDH-211ENST00000590472 PTPRMP28827 1452 aa25.34■■□□□ 1.65
GCDH-211ENST00000590472 MYT1LQ9UL68 1186 aa25.32■■□□□ 1.64
GCDH-211ENST00000590472 ZNF644Q9H582 1327 aaPredicted RBP25.32■■□□□ 1.64
GCDH-211ENST00000590472 REREQ9P2R6 1566 aa25.31■■□□□ 1.64
GCDH-211ENST00000590472 RIMS1Q86UR5 1692 aaKnown RBP25.31■■□□□ 1.64
GCDH-211ENST00000590472 KANK4Q5T7N3 995 aaPredicted RBP25.3■■□□□ 1.64
GCDH-211ENST00000590472 MLECQ14165 292 aa25.27■■□□□ 1.64
GCDH-211ENST00000590472 MBD5Q9P267 1494 aa25.27■■□□□ 1.64
GCDH-211ENST00000590472 INO80Q9ULG1 1556 aaPredicted RBP25.26■■□□□ 1.63
GCDH-211ENST00000590472 SPAG9O60271 1321 aaKnown RBP25.25■■□□□ 1.63
GCDH-211ENST00000590472 FER1L4A9Z1Z3 1794 aa25.25■■□□□ 1.63
GCDH-211ENST00000590472 ATP7AQ04656 1500 aa25.24■■□□□ 1.63
GCDH-211ENST00000590472 AGLP35573 1532 aa25.22■■□□□ 1.63
GCDH-211ENST00000590472 CAMSAP2Q08AD1 1489 aa25.22■■□□□ 1.63
GCDH-211ENST00000590472 APLP2Q06481 763 aa25.16■■□□□ 1.62
GCDH-211ENST00000590472 MYOM3Q5VTT5 1437 aa25.15■■□□□ 1.62
GCDH-211ENST00000590472 CCDC141Q6ZP82 1450 aa25.15■■□□□ 1.62
GCDH-211ENST00000590472 PLXNC1O60486 1568 aa25.14■■□□□ 1.62
GCDH-211ENST00000590472 RTEL1-TNFRSF6BF6WH68 1400 aa25.13■■□□□ 1.61
GCDH-211ENST00000590472 ARHGEF5Q12774 1597 aa25.13■■□□□ 1.61
GCDH-211ENST00000590472 A2MP01023 1474 aa25.12■■□□□ 1.61
GCDH-211ENST00000590472 ADGBQ8N7X0 1667 aa25.12■■□□□ 1.61
GCDH-211ENST00000590472 MIA2Q96PC5 1412 aa25.12■■□□□ 1.61
GCDH-211ENST00000590472 RSPH4AQ5TD94 716 aa25.1■■□□□ 1.61
GCDH-211ENST00000590472 PLPPR3Q6T4P5 718 aa25.08■■□□□ 1.61
GCDH-211ENST00000590472 LMTK3Q96Q04 1460 aa25.06■■□□□ 1.6
GCDH-211ENST00000590472 CEBPAP49715 358 aaPredicted RBP25.04■■□□□ 1.6
GCDH-211ENST00000590472 C3P01024 1663 aa25.02■■□□□ 1.6
GCDH-211ENST00000590472 MAST1Q9Y2H9 1570 aa25.01■■□□□ 1.59
GCDH-211ENST00000590472 DHX29Q7Z478 1369 aaKnown RBP25■■□□□ 1.59
GCDH-211ENST00000590472 PTPN23Q9H3S7 1636 aa25■■□□□ 1.59
GCDH-211ENST00000590472 TSPY4P0CV99 314 aa24.99■■□□□ 1.59
GCDH-211ENST00000590472 TSPY10P0CW01 314 aa24.99■■□□□ 1.59
GCDH-211ENST00000590472 CNTLNQ9NXG0 1405 aa24.99■■□□□ 1.59
GCDH-211ENST00000590472 FGD6Q6ZV73 1430 aa24.97■■□□□ 1.59
GCDH-211ENST00000590472 ESF1Q9H501 851 aaKnown RBP24.97■■□□□ 1.59
GCDH-211ENST00000590472 MROH2AA6NES4 1674 aa24.97■■□□□ 1.59
GCDH-211ENST00000590472 PREX1Q8TCU6 1659 aa24.96■■□□□ 1.59
GCDH-211ENST00000590472 TCOF1Q13428 1488 aaKnown RBP24.96■■□□□ 1.59
GCDH-211ENST00000590472 CLTCQ00610 1675 aaKnown RBP24.94■■□□□ 1.58
GCDH-211ENST00000590472 GGT6Q6P531 493 aa24.94■■□□□ 1.58
GCDH-211ENST00000590472 CROCC2H7BZ55 1655 aa24.93■■□□□ 1.58
GCDH-211ENST00000590472 ABCC5O15440 1437 aa24.91■■□□□ 1.58
GCDH-211ENST00000590472 ZMYM3Q14202 1370 aa24.9■■□□□ 1.58
GCDH-211ENST00000590472 DNMT1P26358 1616 aaKnown RBP24.9■■□□□ 1.58
GCDH-211ENST00000590472 KIF3BO15066 747 aa24.89■■□□□ 1.58
GCDH-211ENST00000590472 HSPA2P54652 639 aa24.89■■□□□ 1.58
GCDH-211ENST00000590472 SETD1BQ9UPS6 1966 aaKnown RBP24.89■■□□□ 1.57
GCDH-211ENST00000590472 PPP6R1Q9UPN7 881 aa24.88■■□□□ 1.57
GCDH-211ENST00000590472 SHANK2Q9UPX8 1470 aa24.88■■□□□ 1.57
GCDH-211ENST00000590472 DAPK1P53355 1430 aa24.87■■□□□ 1.57
GCDH-211ENST00000590472 UHRF1BP1Q6BDS2 1440 aa24.85■■□□□ 1.57
GCDH-211ENST00000590472 NPATQ14207 1427 aa24.84■■□□□ 1.57
GCDH-211ENST00000590472 EIF2AK4Q9P2K8 1649 aaKnown RBP24.83■■□□□ 1.57
GCDH-211ENST00000590472 RNF17Q9BXT8 1623 aaKnown RBP24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms