RNA–Protein interactions for RNA: ENST00000590416.1

LSM14A-208, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2

Gene LSM14A, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-208ENST00000590416 ARAP3Q8WWN8 1544 aa26.25■■□□□ 1.79
LSM14A-208ENST00000590416 NCOA2Q15596 1464 aa26.25■■□□□ 1.79
LSM14A-208ENST00000590416 EFCAB2Q5VUJ9 269 aa26.24■■□□□ 1.79
LSM14A-208ENST00000590416 ITSN2Q9NZM3 1697 aa26.24■■□□□ 1.79
LSM14A-208ENST00000590416 AKNAQ7Z591 1439 aa26.23■■□□□ 1.79
LSM14A-208ENST00000590416 PHLDB1Q86UU1 1377 aa26.23■■□□□ 1.79
LSM14A-208ENST00000590416 GPATCH8Q9UKJ3 1502 aaKnown RBP26.21■■□□□ 1.79
LSM14A-208ENST00000590416 ZNF777Q9ULD5 760 aaPredicted RBP26.2■■□□□ 1.78
LSM14A-208ENST00000590416 ADGRL1O94910 1474 aa26.18■■□□□ 1.78
LSM14A-208ENST00000590416 COL17A1Q9UMD9 1497 aaPredicted RBP26.18■■□□□ 1.78
LSM14A-208ENST00000590416 CFDP1Q9UEE9 299 aaPredicted RBP26.18■■□□□ 1.78
LSM14A-208ENST00000590416 DENND4BO75064 1496 aaPredicted RBP26.14■■□□□ 1.78
LSM14A-208ENST00000590416 SCAPERQ9BY12 1400 aa26.13■■□□□ 1.77
LSM14A-208ENST00000590416 RAPGEF3O95398 923 aa26.12■■□□□ 1.77
LSM14A-208ENST00000590416 PPARGC1BQ86YN6 1023 aaKnown RBP26.11■■□□□ 1.77
LSM14A-208ENST00000590416 SAMD9LQ8IVG5 1584 aa26.11■■□□□ 1.77
LSM14A-208ENST00000590416 ABCC1P33527 1531 aa26.09■■□□□ 1.77
LSM14A-208ENST00000590416 RICTORQ6R327 1708 aa26.09■■□□□ 1.77
LSM14A-208ENST00000590416 FRMPD1Q5SYB0 1578 aa26.07■■□□□ 1.76
LSM14A-208ENST00000590416 MYOM3Q5VTT5 1437 aa26.06■■□□□ 1.76
LSM14A-208ENST00000590416 SYCP2Q9BX26 1530 aa26.05■■□□□ 1.76
LSM14A-208ENST00000590416 POGZQ7Z3K3 1410 aa26.05■■□□□ 1.76
LSM14A-208ENST00000590416 PLEKHH2Q8IVE3 1493 aa26.04■■□□□ 1.76
LSM14A-208ENST00000590416 ZNF644Q9H582 1327 aaPredicted RBP26.02■■□□□ 1.76
LSM14A-208ENST00000590416 CAMSAP2Q08AD1 1489 aa26.01■■□□□ 1.75
LSM14A-208ENST00000590416 ZNF518AQ6AHZ1 1483 aa26.01■■□□□ 1.75
LSM14A-208ENST00000590416 MYT1LQ9UL68 1186 aa26.01■■□□□ 1.75
LSM14A-208ENST00000590416 ARHGEF12Q9NZN5 1544 aa26■■□□□ 1.75
LSM14A-208ENST00000590416 HNRNPMP52272 730 aaKnown RBP eCLIP26■■□□□ 1.75
LSM14A-208ENST00000590416 MIA2Q96PC5 1412 aa25.98■■□□□ 1.75
LSM14A-208ENST00000590416 TRAPPC8Q9Y2L5 1435 aa25.97■■□□□ 1.75
LSM14A-208ENST00000590416 AFAP1Q8N556 730 aa25.97■■□□□ 1.75
LSM14A-208ENST00000590416 KIAA1107Q9UPP5 1409 aa25.97■■□□□ 1.75
LSM14A-208ENST00000590416 ZMYM4Q5VZL5 1548 aa25.96■■□□□ 1.75
LSM14A-208ENST00000590416 PTPN23Q9H3S7 1636 aa25.96■■□□□ 1.75
LSM14A-208ENST00000590416 FGD6Q6ZV73 1430 aa25.94■■□□□ 1.74
LSM14A-208ENST00000590416 KDM5CP41229 1560 aa25.93■■□□□ 1.74
LSM14A-208ENST00000590416 ZFYVE16Q7Z3T8 1539 aa25.93■■□□□ 1.74
LSM14A-208ENST00000590416 HECW2Q9P2P5 1572 aa25.92■■□□□ 1.74
LSM14A-208ENST00000590416 ARHGEF40Q8TER5 1519 aa25.9■■□□□ 1.74
LSM14A-208ENST00000590416 MAGI2Q86UL8 1455 aa25.89■■□□□ 1.73
LSM14A-208ENST00000590416 CCDC141Q6ZP82 1450 aa25.87■■□□□ 1.73
LSM14A-208ENST00000590416 MBD5Q9P267 1494 aa25.87■■□□□ 1.73
LSM14A-208ENST00000590416 YEATS2Q9ULM3 1422 aa25.87■■□□□ 1.73
LSM14A-208ENST00000590416 SPAG9O60271 1321 aaKnown RBP25.87■■□□□ 1.73
LSM14A-208ENST00000590416 ARHGEF5Q12774 1597 aa25.86■■□□□ 1.73
LSM14A-208ENST00000590416 FAM50AQ14320 339 aaKnown RBP25.85■■□□□ 1.73
LSM14A-208ENST00000590416 TCOF1Q13428 1488 aaKnown RBP25.84■■□□□ 1.73
LSM14A-208ENST00000590416 MLH3Q9UHC1 1453 aa25.84■■□□□ 1.73
LSM14A-208ENST00000590416 KIDINS220Q9ULH0 1771 aa25.83■■□□□ 1.73
LSM14A-208ENST00000590416 RSPH4AQ5TD94 716 aa25.83■■□□□ 1.73
LSM14A-208ENST00000590416 ATP7AQ04656 1500 aa25.82■■□□□ 1.72
LSM14A-208ENST00000590416 ABCA6Q8N139 1617 aa25.81■■□□□ 1.72
LSM14A-208ENST00000590416 TSPY4P0CV99 314 aa25.8■■□□□ 1.72
LSM14A-208ENST00000590416 TSPY10P0CW01 314 aa25.8■■□□□ 1.72
LSM14A-208ENST00000590416 INO80Q9ULG1 1556 aaPredicted RBP25.8■■□□□ 1.72
LSM14A-208ENST00000590416 DIP2CQ9Y2E4 1556 aa25.79■■□□□ 1.72
LSM14A-208ENST00000590416 ARID4BQ4LE39 1312 aaPredicted RBP25.79■■□□□ 1.72
LSM14A-208ENST00000590416 ATP10AO60312 1499 aa25.78■■□□□ 1.72
LSM14A-208ENST00000590416 C9orf84Q5VXU9 1444 aa25.77■■□□□ 1.72
LSM14A-208ENST00000590416 DNMT1P26358 1616 aaKnown RBP25.77■■□□□ 1.72
LSM14A-208ENST00000590416 CROCC2H7BZ55 1655 aa25.76■■□□□ 1.71
LSM14A-208ENST00000590416 DAPK1P53355 1430 aa25.73■■□□□ 1.71
LSM14A-208ENST00000590416 RTEL1-TNFRSF6BF6WH68 1400 aa25.72■■□□□ 1.71
LSM14A-208ENST00000590416 ABCC5O15440 1437 aa25.71■■□□□ 1.71
LSM14A-208ENST00000590416 MAST1Q9Y2H9 1570 aa25.71■■□□□ 1.71
LSM14A-208ENST00000590416 ADGBQ8N7X0 1667 aa25.71■■□□□ 1.71
LSM14A-208ENST00000590416 SIGLEC1Q9BZZ2 1709 aa25.69■■□□□ 1.7
LSM14A-208ENST00000590416 SHANK2Q9UPX8 1470 aa25.68■■□□□ 1.7
LSM14A-208ENST00000590416 RRBP1Q9P2E9 1410 aaKnown RBP25.67■■□□□ 1.7
LSM14A-208ENST00000590416 CHIC2Q9UKJ5 165 aa25.67■■□□□ 1.7
LSM14A-208ENST00000590416 REREQ9P2R6 1566 aa25.66■■□□□ 1.7
LSM14A-208ENST00000590416 ITGAEP38570 1179 aa25.66■■□□□ 1.7
LSM14A-208ENST00000590416 A2MP01023 1474 aa25.66■■□□□ 1.7
LSM14A-208ENST00000590416 MLECQ14165 292 aa25.65■■□□□ 1.7
LSM14A-208ENST00000590416 BCORL1Q5H9F3 1711 aa25.64■■□□□ 1.7
LSM14A-208ENST00000590416 PLXNC1O60486 1568 aa25.63■■□□□ 1.69
LSM14A-208ENST00000590416 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.62■■□□□ 1.69
LSM14A-208ENST00000590416 AGLP35573 1532 aa25.58■■□□□ 1.69
LSM14A-208ENST00000590416 ANKRD30AQ9BXX3 1397 aa25.58■■□□□ 1.69
LSM14A-208ENST00000590416 RRP7BPQ9NSQ0 103 aa25.58■■□□□ 1.69
LSM14A-208ENST00000590416 DHX29Q7Z478 1369 aaKnown RBP25.57■■□□□ 1.68
LSM14A-208ENST00000590416 KIF15Q9NS87 1388 aa25.56■■□□□ 1.68
LSM14A-208ENST00000590416 KDM4FA0A1W2PPD8 638 aa25.56■■□□□ 1.68
LSM14A-208ENST00000590416 ADAMTSL3P82987 1691 aa25.55■■□□□ 1.68
LSM14A-208ENST00000590416 DUOX2Q9NRD8 1548 aa25.54■■□□□ 1.68
LSM14A-208ENST00000590416 FER1L4A9Z1Z3 1794 aa25.54■■□□□ 1.68
LSM14A-208ENST00000590416 PTPRKQ15262 1439 aa25.54■■□□□ 1.68
LSM14A-208ENST00000590416 MADDQ8WXG6 1647 aa25.53■■□□□ 1.68
LSM14A-208ENST00000590416 ADGRL2O95490 1459 aa25.53■■□□□ 1.68
LSM14A-208ENST00000590416 KIF3BO15066 747 aa25.51■■□□□ 1.67
LSM14A-208ENST00000590416 RIMS1Q86UR5 1692 aaKnown RBP25.51■■□□□ 1.67
LSM14A-208ENST00000590416 NCOA1Q15788 1441 aa25.5■■□□□ 1.67
LSM14A-208ENST00000590416 GGT6Q6P531 493 aa25.5■■□□□ 1.67
LSM14A-208ENST00000590416 ESF1Q9H501 851 aaKnown RBP25.49■■□□□ 1.67
LSM14A-208ENST00000590416 EIF2AK4Q9P2K8 1649 aaKnown RBP25.48■■□□□ 1.67
LSM14A-208ENST00000590416 AEBP2Q6ZN18 517 aaPredicted RBP25.46■■□□□ 1.67
LSM14A-208ENST00000590416 ERBINQ96RT1 1412 aa25.46■■□□□ 1.67
LSM14A-208ENST00000590416 ROCK1Q13464 1354 aa25.44■■□□□ 1.66
LSM14A-208ENST00000590416 PLPPR3Q6T4P5 718 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms