RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 ZMYM4Q5VZL5 1548 aa12.31□□□□□ -0.44
NPC1-208ENST00000590301 POGZQ7Z3K3 1410 aa12.3□□□□□ -0.44
NPC1-208ENST00000590301 FYCO1Q9BQS8 1478 aa12.3□□□□□ -0.44
NPC1-208ENST00000590301 ARHGEF40Q8TER5 1519 aa12.3□□□□□ -0.44
NPC1-208ENST00000590301 ARID4BQ4LE39 1312 aaPredicted RBP12.3□□□□□ -0.44
NPC1-208ENST00000590301 KIF14Q15058 1648 aa12.29□□□□□ -0.44
NPC1-208ENST00000590301 PTPRMP28827 1452 aa12.27□□□□□ -0.45
NPC1-208ENST00000590301 ZFYVE16Q7Z3T8 1539 aa12.27□□□□□ -0.45
NPC1-208ENST00000590301 ZNF518AQ6AHZ1 1483 aa12.26□□□□□ -0.45
NPC1-208ENST00000590301 PCF11O94913 1555 aaKnown RBP12.26□□□□□ -0.45
NPC1-208ENST00000590301 YEATS2Q9ULM3 1422 aa12.25□□□□□ -0.45
NPC1-208ENST00000590301 ARHGAP5Q13017 1502 aa12.25□□□□□ -0.45
NPC1-208ENST00000590301 RICTORQ6R327 1708 aa12.25□□□□□ -0.45
NPC1-208ENST00000590301 ADAMTSL3P82987 1691 aa12.23□□□□□ -0.45
NPC1-208ENST00000590301 HECW2Q9P2P5 1572 aa12.23□□□□□ -0.45
NPC1-208ENST00000590301 ATP10AO60312 1499 aa12.23□□□□□ -0.45
NPC1-208ENST00000590301 C9orf84Q5VXU9 1444 aa12.21□□□□□ -0.45
NPC1-208ENST00000590301 BCORL1Q5H9F3 1711 aa12.21□□□□□ -0.45
NPC1-208ENST00000590301 MYO5CQ9NQX4 1742 aa12.21□□□□□ -0.45
NPC1-208ENST00000590301 AFAP1Q8N556 730 aa12.21□□□□□ -0.45
NPC1-208ENST00000590301 MLH3Q9UHC1 1453 aa12.2□□□□□ -0.46
NPC1-208ENST00000590301 KDM5CP41229 1560 aa12.19□□□□□ -0.46
NPC1-208ENST00000590301 CEP162Q5TB80 1403 aa12.19□□□□□ -0.46
NPC1-208ENST00000590301 MADDQ8WXG6 1647 aa12.18□□□□□ -0.46
NPC1-208ENST00000590301 MTUS2Q5JR59 1369 aa12.18□□□□□ -0.46
NPC1-208ENST00000590301 MYT1LQ9UL68 1186 aa12.17□□□□□ -0.46
NPC1-208ENST00000590301 PREX2Q70Z35 1606 aa12.17□□□□□ -0.46
NPC1-208ENST00000590301 ABCC1P33527 1531 aa12.16□□□□□ -0.46
NPC1-208ENST00000590301 GPATCH8Q9UKJ3 1502 aaKnown RBP12.16□□□□□ -0.46
NPC1-208ENST00000590301 PLEKHH2Q8IVE3 1493 aa12.16□□□□□ -0.46
NPC1-208ENST00000590301 KIAA1107Q9UPP5 1409 aa12.16□□□□□ -0.46
NPC1-208ENST00000590301 CCNB3Q8WWL7 1395 aa12.16□□□□□ -0.46
NPC1-208ENST00000590301 LRRIQ1Q96JM4 1722 aa12.15□□□□□ -0.46
NPC1-208ENST00000590301 REREQ9P2R6 1566 aa12.15□□□□□ -0.46
NPC1-208ENST00000590301 TRAPPC8Q9Y2L5 1435 aa12.15□□□□□ -0.46
NPC1-208ENST00000590301 MLECQ14165 292 aa12.15□□□□□ -0.46
NPC1-208ENST00000590301 CFDP1Q9UEE9 299 aaPredicted RBP12.15□□□□□ -0.46
NPC1-208ENST00000590301 ARHGEF12Q9NZN5 1544 aa12.15□□□□□ -0.46
NPC1-208ENST00000590301 POTEDQ86YR6 584 aa12.14□□□□□ -0.47
NPC1-208ENST00000590301 ZNF777Q9ULD5 760 aaPredicted RBP12.13□□□□□ -0.47
NPC1-208ENST00000590301 AGLP35573 1532 aa12.12□□□□□ -0.47
NPC1-208ENST00000590301 LMTK3Q96Q04 1460 aa12.12□□□□□ -0.47
NPC1-208ENST00000590301 DIP2CQ9Y2E4 1556 aa12.12□□□□□ -0.47
NPC1-208ENST00000590301 SPAG9O60271 1321 aaKnown RBP12.11□□□□□ -0.47
NPC1-208ENST00000590301 EHBP1L1Q8N3D4 1523 aa12.11□□□□□ -0.47
NPC1-208ENST00000590301 CDC42BPBQ9Y5S2 1711 aa12.11□□□□□ -0.47
NPC1-208ENST00000590301 ESF1Q9H501 851 aaKnown RBP12.1□□□□□ -0.47
NPC1-208ENST00000590301 RIMS1Q86UR5 1692 aaKnown RBP12.1□□□□□ -0.47
NPC1-208ENST00000590301 HNRNPMP52272 730 aaKnown RBP eCLIP12.09□□□□□ -0.47
NPC1-208ENST00000590301 SYCP2Q9BX26 1530 aa12.08□□□□□ -0.48
NPC1-208ENST00000590301 CNTLNQ9NXG0 1405 aa12.08□□□□□ -0.48
NPC1-208ENST00000590301 SAMD9LQ8IVG5 1584 aa12.08□□□□□ -0.48
NPC1-208ENST00000590301 SIGLEC1Q9BZZ2 1709 aa12.08□□□□□ -0.48
NPC1-208ENST00000590301 ITSN2Q9NZM3 1697 aa12.07□□□□□ -0.48
NPC1-208ENST00000590301 VPS8Q8N3P4 1428 aa12.07□□□□□ -0.48
NPC1-208ENST00000590301 ABCA6Q8N139 1617 aa12.07□□□□□ -0.48
NPC1-208ENST00000590301 CDC42BPAQ5VT25 1732 aa12.06□□□□□ -0.48
NPC1-208ENST00000590301 ILDR1Q86SU0 546 aaPredicted RBP12.06□□□□□ -0.48
NPC1-208ENST00000590301 RSPH4AQ5TD94 716 aa12.05□□□□□ -0.48
NPC1-208ENST00000590301 TIAM1Q13009 1591 aa12.05□□□□□ -0.48
NPC1-208ENST00000590301 LOC105371045A0A1W2PR82 267 aa12.04□□□□□ -0.48
NPC1-208ENST00000590301 CEBPAP49715 358 aaPredicted RBP12.04□□□□□ -0.48
NPC1-208ENST00000590301 ATP7AQ04656 1500 aa12.04□□□□□ -0.48
NPC1-208ENST00000590301 RTEL1-TNFRSF6BF6WH68 1400 aa12.03□□□□□ -0.48
NPC1-208ENST00000590301 UHRF1BP1Q6BDS2 1440 aa12.03□□□□□ -0.48
NPC1-208ENST00000590301 A2MP01023 1474 aa12.03□□□□□ -0.48
NPC1-208ENST00000590301 NCOA2Q15596 1464 aa12.03□□□□□ -0.48
NPC1-208ENST00000590301 MBD5Q9P267 1494 aa12.03□□□□□ -0.48
NPC1-208ENST00000590301 FER1L4A9Z1Z3 1794 aa12.03□□□□□ -0.48
NPC1-208ENST00000590301 HSPA2P54652 639 aa12.03□□□□□ -0.48
NPC1-208ENST00000590301 ZNF644Q9H582 1327 aaPredicted RBP12.03□□□□□ -0.48
NPC1-208ENST00000590301 KIDINS220Q9ULH0 1771 aa12.02□□□□□ -0.48
NPC1-208ENST00000590301 MAP3K1Q13233 1512 aa12.02□□□□□ -0.48
NPC1-208ENST00000590301 INO80Q9ULG1 1556 aaPredicted RBP12.01□□□□□ -0.49
NPC1-208ENST00000590301 DMRT2Q9Y5R5 561 aa12.01□□□□□ -0.49
NPC1-208ENST00000590301 LRRC9Q6ZRR7 1453 aa12.01□□□□□ -0.49
NPC1-208ENST00000590301 NPATQ14207 1427 aa12□□□□□ -0.49
NPC1-208ENST00000590301 CCDC141Q6ZP82 1450 aa12□□□□□ -0.49
NPC1-208ENST00000590301 PLXNC1O60486 1568 aa12□□□□□ -0.49
NPC1-208ENST00000590301 FBXO41Q8TF61 875 aa11.99□□□□□ -0.49
NPC1-208ENST00000590301 DHX29Q7Z478 1369 aaKnown RBP11.99□□□□□ -0.49
NPC1-208ENST00000590301 SUPT6HQ7KZ85 1726 aaKnown RBP11.98□□□□□ -0.49
NPC1-208ENST00000590301 CAMSAP2Q08AD1 1489 aa11.98□□□□□ -0.49
NPC1-208ENST00000590301 ZMYM3Q14202 1370 aa11.98□□□□□ -0.49
NPC1-208ENST00000590301 TSPY4P0CV99 314 aa11.97□□□□□ -0.49
NPC1-208ENST00000590301 TSPY10P0CW01 314 aa11.97□□□□□ -0.49
NPC1-208ENST00000590301 PREX1Q8TCU6 1659 aa11.97□□□□□ -0.49
NPC1-208ENST00000590301 MIA2Q96PC5 1412 aa11.96□□□□□ -0.49
NPC1-208ENST00000590301 APLP2Q06481 763 aa11.96□□□□□ -0.49
NPC1-208ENST00000590301 GGT6Q6P531 493 aa11.96□□□□□ -0.49
NPC1-208ENST00000590301 ARHGEF5Q12774 1597 aa11.94□□□□□ -0.5
NPC1-208ENST00000590301 FAM135AQ9P2D6 1515 aa11.94□□□□□ -0.5
NPC1-208ENST00000590301 MYOM3Q5VTT5 1437 aa11.94□□□□□ -0.5
NPC1-208ENST00000590301 KANK4Q5T7N3 995 aaPredicted RBP11.93□□□□□ -0.5
NPC1-208ENST00000590301 MROH2AA6NES4 1674 aa11.93□□□□□ -0.5
NPC1-208ENST00000590301 PTPRTO14522 1441 aa11.93□□□□□ -0.5
NPC1-208ENST00000590301 C3P01024 1663 aa11.92□□□□□ -0.5
NPC1-208ENST00000590301 ADGBQ8N7X0 1667 aa11.92□□□□□ -0.5
NPC1-208ENST00000590301 PTPRKQ15262 1439 aa11.92□□□□□ -0.5
NPC1-208ENST00000590301 KIF3BO15066 747 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms