RNA–Protein interactions for RNA: ENST00000590275.1

LRP3-202, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 1,078 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-202ENST00000590275 POGZQ7Z3K3 1410 aa34.26■■■■□ 3.07
LRP3-202ENST00000590275 CDC42BPBQ9Y5S2 1711 aa34.24■■■■□ 3.07
LRP3-202ENST00000590275 YEATS2Q9ULM3 1422 aa34.23■■■■□ 3.07
LRP3-202ENST00000590275 ZMYM4Q5VZL5 1548 aa34.23■■■■□ 3.07
LRP3-202ENST00000590275 PREX2Q70Z35 1606 aa34.2■■■■□ 3.07
LRP3-202ENST00000590275 ARHGEF40Q8TER5 1519 aa34.19■■■■□ 3.06
LRP3-202ENST00000590275 ARHGEF12Q9NZN5 1544 aa34.19■■■■□ 3.06
LRP3-202ENST00000590275 GPATCH8Q9UKJ3 1502 aaKnown RBP34.18■■■■□ 3.06
LRP3-202ENST00000590275 VPS8Q8N3P4 1428 aa34.16■■■■□ 3.06
LRP3-202ENST00000590275 MTUS2Q5JR59 1369 aa34.16■■■■□ 3.06
LRP3-202ENST00000590275 AFAP1Q8N556 730 aa34.16■■■■□ 3.06
LRP3-202ENST00000590275 CDC42BPAQ5VT25 1732 aa34.16■■■■□ 3.06
LRP3-202ENST00000590275 ZFYVE16Q7Z3T8 1539 aa34.11■■■■□ 3.05
LRP3-202ENST00000590275 SIGLEC1Q9BZZ2 1709 aa34.11■■■■□ 3.05
LRP3-202ENST00000590275 TRAPPC8Q9Y2L5 1435 aa34.11■■■■□ 3.05
LRP3-202ENST00000590275 ABCC1P33527 1531 aa34.09■■■■□ 3.05
LRP3-202ENST00000590275 MAGI2Q86UL8 1455 aa34.09■■■■□ 3.05
LRP3-202ENST00000590275 EHBP1L1Q8N3D4 1523 aa34.07■■■■□ 3.04
LRP3-202ENST00000590275 KDM5CP41229 1560 aa34.06■■■■□ 3.04
LRP3-202ENST00000590275 ZNF518AQ6AHZ1 1483 aa34.06■■■■□ 3.04
LRP3-202ENST00000590275 SAMD9LQ8IVG5 1584 aa34.05■■■■□ 3.04
LRP3-202ENST00000590275 CCNB3Q8WWL7 1395 aa34.03■■■■□ 3.04
LRP3-202ENST00000590275 ZNF777Q9ULD5 760 aaPredicted RBP34.03■■■■□ 3.04
LRP3-202ENST00000590275 ARID4BQ4LE39 1312 aaPredicted RBP34.03■■■■□ 3.04
LRP3-202ENST00000590275 ADAMTSL3P82987 1691 aa34.03■■■■□ 3.04
LRP3-202ENST00000590275 TIAM1Q13009 1591 aa34.02■■■■□ 3.04
LRP3-202ENST00000590275 BCORL1Q5H9F3 1711 aa33.99■■■■□ 3.03
LRP3-202ENST00000590275 ITSN2Q9NZM3 1697 aa33.99■■■■□ 3.03
LRP3-202ENST00000590275 CFDP1Q9UEE9 299 aaPredicted RBP33.98■■■■□ 3.03
LRP3-202ENST00000590275 ZNF644Q9H582 1327 aaPredicted RBP33.97■■■■□ 3.03
LRP3-202ENST00000590275 ATP10AO60312 1499 aa33.96■■■■□ 3.03
LRP3-202ENST00000590275 HNRNPMP52272 730 aaKnown RBP eCLIP33.96■■■■□ 3.03
LRP3-202ENST00000590275 KANK4Q5T7N3 995 aaPredicted RBP33.96■■■■□ 3.03
LRP3-202ENST00000590275 SYCP2Q9BX26 1530 aa33.95■■■■□ 3.03
LRP3-202ENST00000590275 NCOA2Q15596 1464 aa33.95■■■■□ 3.02
LRP3-202ENST00000590275 MLH3Q9UHC1 1453 aa33.94■■■■□ 3.02
LRP3-202ENST00000590275 LRRC9Q6ZRR7 1453 aa33.93■■■■□ 3.02
LRP3-202ENST00000590275 HECW2Q9P2P5 1572 aa33.92■■■■□ 3.02
LRP3-202ENST00000590275 MADDQ8WXG6 1647 aa33.91■■■■□ 3.02
LRP3-202ENST00000590275 DIP2CQ9Y2E4 1556 aa33.91■■■■□ 3.02
LRP3-202ENST00000590275 C9orf84Q5VXU9 1444 aa33.91■■■■□ 3.02
LRP3-202ENST00000590275 PTPRMP28827 1452 aa33.89■■■■□ 3.02
LRP3-202ENST00000590275 KIAA1107Q9UPP5 1409 aa33.88■■■■□ 3.01
LRP3-202ENST00000590275 ABCA6Q8N139 1617 aa33.88■■■■□ 3.01
LRP3-202ENST00000590275 MAP3K1Q13233 1512 aa33.86■■■■□ 3.01
LRP3-202ENST00000590275 MLECQ14165 292 aa33.86■■■■□ 3.01
LRP3-202ENST00000590275 MYT1LQ9UL68 1186 aa33.84■■■■□ 3.01
LRP3-202ENST00000590275 KIDINS220Q9ULH0 1771 aa33.84■■■■□ 3.01
LRP3-202ENST00000590275 SUPT6HQ7KZ85 1726 aaKnown RBP33.83■■■■□ 3.01
LRP3-202ENST00000590275 MBD5Q9P267 1494 aa33.82■■■■□ 3.01
LRP3-202ENST00000590275 PLEKHH2Q8IVE3 1493 aa33.81■■■■□ 3
LRP3-202ENST00000590275 SPAG9O60271 1321 aaKnown RBP33.77■■■■□ 3
LRP3-202ENST00000590275 REREQ9P2R6 1566 aa33.77■■■■□ 3
LRP3-202ENST00000590275 RIMS1Q86UR5 1692 aaKnown RBP33.76■■■□□ 2.99
LRP3-202ENST00000590275 CAMSAP2Q08AD1 1489 aa33.71■■■□□ 2.99
LRP3-202ENST00000590275 INO80Q9ULG1 1556 aaPredicted RBP33.71■■■□□ 2.99
LRP3-202ENST00000590275 ATP7AQ04656 1500 aa33.69■■■□□ 2.98
LRP3-202ENST00000590275 AGLP35573 1532 aa33.68■■■□□ 2.98
LRP3-202ENST00000590275 PLPPR3Q6T4P5 718 aa33.65■■■□□ 2.98
LRP3-202ENST00000590275 FER1L4A9Z1Z3 1794 aa33.62■■■□□ 2.97
LRP3-202ENST00000590275 MYOM3Q5VTT5 1437 aa33.6■■■□□ 2.97
LRP3-202ENST00000590275 CEBPAP49715 358 aaPredicted RBP33.59■■■□□ 2.97
LRP3-202ENST00000590275 CCDC141Q6ZP82 1450 aa33.58■■■□□ 2.97
LRP3-202ENST00000590275 PLXNC1O60486 1568 aa33.58■■■□□ 2.97
LRP3-202ENST00000590275 A2MP01023 1474 aa33.57■■■□□ 2.97
LRP3-202ENST00000590275 APLP2Q06481 763 aa33.56■■■□□ 2.96
LRP3-202ENST00000590275 RTEL1-TNFRSF6BF6WH68 1400 aa33.55■■■□□ 2.96
LRP3-202ENST00000590275 MIA2Q96PC5 1412 aa33.53■■■□□ 2.96
LRP3-202ENST00000590275 ARHGEF5Q12774 1597 aa33.52■■■□□ 2.96
LRP3-202ENST00000590275 LMTK3Q96Q04 1460 aa33.52■■■□□ 2.96
LRP3-202ENST00000590275 RSPH4AQ5TD94 716 aa33.48■■■□□ 2.95
LRP3-202ENST00000590275 DHX29Q7Z478 1369 aaKnown RBP33.45■■■□□ 2.94
LRP3-202ENST00000590275 ADGBQ8N7X0 1667 aa33.42■■■□□ 2.94
LRP3-202ENST00000590275 FGD6Q6ZV73 1430 aa33.4■■■□□ 2.94
LRP3-202ENST00000590275 HSPA2P54652 639 aa33.4■■■□□ 2.94
LRP3-202ENST00000590275 GGT6Q6P531 493 aa33.39■■■□□ 2.94
LRP3-202ENST00000590275 TSPY4P0CV99 314 aa33.38■■■□□ 2.93
LRP3-202ENST00000590275 TSPY10P0CW01 314 aa33.38■■■□□ 2.93
LRP3-202ENST00000590275 C3P01024 1663 aa33.37■■■□□ 2.93
LRP3-202ENST00000590275 PTPN23Q9H3S7 1636 aa33.37■■■□□ 2.93
LRP3-202ENST00000590275 MAST1Q9Y2H9 1570 aa33.36■■■□□ 2.93
LRP3-202ENST00000590275 ABCC5O15440 1437 aa33.36■■■□□ 2.93
LRP3-202ENST00000590275 TCOF1Q13428 1488 aaKnown RBP33.35■■■□□ 2.93
LRP3-202ENST00000590275 CNTLNQ9NXG0 1405 aa33.34■■■□□ 2.93
LRP3-202ENST00000590275 ESF1Q9H501 851 aaKnown RBP33.32■■■□□ 2.92
LRP3-202ENST00000590275 ZMYM3Q14202 1370 aa33.32■■■□□ 2.92
LRP3-202ENST00000590275 KIF3BO15066 747 aa33.31■■■□□ 2.92
LRP3-202ENST00000590275 CLTCQ00610 1675 aaKnown RBP33.26■■■□□ 2.92
LRP3-202ENST00000590275 DAPK1P53355 1430 aa33.26■■■□□ 2.91
LRP3-202ENST00000590275 PPARGC1BQ86YN6 1023 aaKnown RBP33.25■■■□□ 2.91
LRP3-202ENST00000590275 MROH2AA6NES4 1674 aa33.23■■■□□ 2.91
LRP3-202ENST00000590275 PREX1Q8TCU6 1659 aa33.22■■■□□ 2.91
LRP3-202ENST00000590275 SHANK2Q9UPX8 1470 aa33.21■■■□□ 2.91
LRP3-202ENST00000590275 PPP6R1Q9UPN7 881 aa33.21■■■□□ 2.91
LRP3-202ENST00000590275 DNMT1P26358 1616 aaKnown RBP33.2■■■□□ 2.91
LRP3-202ENST00000590275 CROCC2H7BZ55 1655 aa33.2■■■□□ 2.9
LRP3-202ENST00000590275 PTPRKQ15262 1439 aa33.19■■■□□ 2.9
LRP3-202ENST00000590275 UHRF1BP1Q6BDS2 1440 aa33.19■■■□□ 2.9
LRP3-202ENST00000590275 RRP7BPQ9NSQ0 103 aa33.16■■■□□ 2.9
LRP3-202ENST00000590275 NPATQ14207 1427 aa33.16■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms