RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 SCAPERQ9BY12 1400 aa23.33■■□□□ 1.32
MBD1-220ENST00000589758 HECW2Q9P2P5 1572 aa23.31■■□□□ 1.32
MBD1-220ENST00000589758 BCORL1Q5H9F3 1711 aa23.31■■□□□ 1.32
MBD1-220ENST00000589758 PCF11O94913 1555 aaKnown RBP23.31■■□□□ 1.32
MBD1-220ENST00000589758 POGZQ7Z3K3 1410 aa23.29■■□□□ 1.32
MBD1-220ENST00000589758 ZFYVE16Q7Z3T8 1539 aa23.28■■□□□ 1.32
MBD1-220ENST00000589758 PTPRMP28827 1452 aa23.28■■□□□ 1.32
MBD1-220ENST00000589758 FYCO1Q9BQS8 1478 aa23.27■■□□□ 1.32
MBD1-220ENST00000589758 ARHGAP5Q13017 1502 aa23.26■■□□□ 1.31
MBD1-220ENST00000589758 YEATS2Q9ULM3 1422 aa23.25■■□□□ 1.31
MBD1-220ENST00000589758 MADDQ8WXG6 1647 aa23.22■■□□□ 1.31
MBD1-220ENST00000589758 ZNF518AQ6AHZ1 1483 aa23.21■■□□□ 1.31
MBD1-220ENST00000589758 CDC42BPBQ9Y5S2 1711 aa23.19■■□□□ 1.3
MBD1-220ENST00000589758 PREX2Q70Z35 1606 aa23.18■■□□□ 1.3
MBD1-220ENST00000589758 ATP10AO60312 1499 aa23.17■■□□□ 1.3
MBD1-220ENST00000589758 RIMS1Q86UR5 1692 aaKnown RBP23.16■■□□□ 1.3
MBD1-220ENST00000589758 KDM5CP41229 1560 aa23.15■■□□□ 1.3
MBD1-220ENST00000589758 C9orf84Q5VXU9 1444 aa23.15■■□□□ 1.3
MBD1-220ENST00000589758 AFAP1Q8N556 730 aa23.14■■□□□ 1.29
MBD1-220ENST00000589758 SIGLEC1Q9BZZ2 1709 aa23.13■■□□□ 1.29
MBD1-220ENST00000589758 MYT1LQ9UL68 1186 aa23.12■■□□□ 1.29
MBD1-220ENST00000589758 CDC42BPAQ5VT25 1732 aa23.11■■□□□ 1.29
MBD1-220ENST00000589758 MLECQ14165 292 aa23.1■■□□□ 1.29
MBD1-220ENST00000589758 ABCC1P33527 1531 aa23.09■■□□□ 1.29
MBD1-220ENST00000589758 MLH3Q9UHC1 1453 aa23.08■■□□□ 1.29
MBD1-220ENST00000589758 ITSN2Q9NZM3 1697 aa23.06■■□□□ 1.28
MBD1-220ENST00000589758 FER1L4A9Z1Z3 1794 aa23.06■■□□□ 1.28
MBD1-220ENST00000589758 TRAPPC8Q9Y2L5 1435 aa23.06■■□□□ 1.28
MBD1-220ENST00000589758 ARHGEF12Q9NZN5 1544 aa23.05■■□□□ 1.28
MBD1-220ENST00000589758 CEP162Q5TB80 1403 aa23.05■■□□□ 1.28
MBD1-220ENST00000589758 MTUS2Q5JR59 1369 aa23.04■■□□□ 1.28
MBD1-220ENST00000589758 GPATCH8Q9UKJ3 1502 aaKnown RBP23.04■■□□□ 1.28
MBD1-220ENST00000589758 REREQ9P2R6 1566 aa23.04■■□□□ 1.28
MBD1-220ENST00000589758 DIP2CQ9Y2E4 1556 aa23.04■■□□□ 1.28
MBD1-220ENST00000589758 ZNF777Q9ULD5 760 aaPredicted RBP23.02■■□□□ 1.28
MBD1-220ENST00000589758 LMTK3Q96Q04 1460 aa23.02■■□□□ 1.28
MBD1-220ENST00000589758 PLPPR3Q6T4P5 718 aa23.01■■□□□ 1.27
MBD1-220ENST00000589758 ABCA6Q8N139 1617 aa23■■□□□ 1.27
MBD1-220ENST00000589758 CCNB3Q8WWL7 1395 aa23■■□□□ 1.27
MBD1-220ENST00000589758 SAMD9LQ8IVG5 1584 aa22.99■■□□□ 1.27
MBD1-220ENST00000589758 CFDP1Q9UEE9 299 aaPredicted RBP22.99■■□□□ 1.27
MBD1-220ENST00000589758 PLEKHH2Q8IVE3 1493 aa22.98■■□□□ 1.27
MBD1-220ENST00000589758 KIAA1107Q9UPP5 1409 aa22.96■■□□□ 1.27
MBD1-220ENST00000589758 AGLP35573 1532 aa22.96■■□□□ 1.27
MBD1-220ENST00000589758 EHBP1L1Q8N3D4 1523 aa22.96■■□□□ 1.27
MBD1-220ENST00000589758 KIDINS220Q9ULH0 1771 aa22.96■■□□□ 1.27
MBD1-220ENST00000589758 SYCP2Q9BX26 1530 aa22.95■■□□□ 1.26
MBD1-220ENST00000589758 HNRNPMP52272 730 aaKnown RBP eCLIP22.94■■□□□ 1.26
MBD1-220ENST00000589758 SPAG9O60271 1321 aaKnown RBP22.93■■□□□ 1.26
MBD1-220ENST00000589758 ESF1Q9H501 851 aaKnown RBP22.9■■□□□ 1.26
MBD1-220ENST00000589758 CEBPAP49715 358 aaPredicted RBP22.89■■□□□ 1.25
MBD1-220ENST00000589758 HSPA2P54652 639 aa22.89■■□□□ 1.25
MBD1-220ENST00000589758 TIAM1Q13009 1591 aa22.89■■□□□ 1.25
MBD1-220ENST00000589758 LOC105371045A0A1W2PR82 267 aa22.87■■□□□ 1.25
MBD1-220ENST00000589758 PREX1Q8TCU6 1659 aa22.86■■□□□ 1.25
MBD1-220ENST00000589758 ATP7AQ04656 1500 aa22.86■■□□□ 1.25
MBD1-220ENST00000589758 CNTLNQ9NXG0 1405 aa22.84■■□□□ 1.25
MBD1-220ENST00000589758 INO80Q9ULG1 1556 aaPredicted RBP22.84■■□□□ 1.25
MBD1-220ENST00000589758 SETD1BQ9UPS6 1966 aaKnown RBP22.83■■□□□ 1.24
MBD1-220ENST00000589758 VPS8Q8N3P4 1428 aa22.82■■□□□ 1.24
MBD1-220ENST00000589758 SUPT6HQ7KZ85 1726 aaKnown RBP22.82■■□□□ 1.24
MBD1-220ENST00000589758 ZNF644Q9H582 1327 aaPredicted RBP22.82■■□□□ 1.24
MBD1-220ENST00000589758 C3P01024 1663 aa22.81■■□□□ 1.24
MBD1-220ENST00000589758 NCOA2Q15596 1464 aa22.8■■□□□ 1.24
MBD1-220ENST00000589758 FBXO41Q8TF61 875 aa22.8■■□□□ 1.24
MBD1-220ENST00000589758 UHRF1BP1Q6BDS2 1440 aa22.8■■□□□ 1.24
MBD1-220ENST00000589758 A2MP01023 1474 aa22.79■■□□□ 1.24
MBD1-220ENST00000589758 MBD5Q9P267 1494 aa22.79■■□□□ 1.24
MBD1-220ENST00000589758 PLXNC1O60486 1568 aa22.77■■□□□ 1.24
MBD1-220ENST00000589758 RTEL1-TNFRSF6BF6WH68 1400 aa22.77■■□□□ 1.24
MBD1-220ENST00000589758 RSPH4AQ5TD94 716 aa22.77■■□□□ 1.24
MBD1-220ENST00000589758 ADGBQ8N7X0 1667 aa22.76■■□□□ 1.23
MBD1-220ENST00000589758 MROH2AA6NES4 1674 aa22.75■■□□□ 1.23
MBD1-220ENST00000589758 LRRC9Q6ZRR7 1453 aa22.73■■□□□ 1.23
MBD1-220ENST00000589758 MAP3K1Q13233 1512 aa22.72■■□□□ 1.23
MBD1-220ENST00000589758 PPP6R1Q9UPN7 881 aa22.72■■□□□ 1.23
MBD1-220ENST00000589758 CAMSAP2Q08AD1 1489 aa22.72■■□□□ 1.23
MBD1-220ENST00000589758 DMRT2Q9Y5R5 561 aa22.71■■□□□ 1.23
MBD1-220ENST00000589758 ZMYM3Q14202 1370 aa22.71■■□□□ 1.23
MBD1-220ENST00000589758 CCDC141Q6ZP82 1450 aa22.71■■□□□ 1.23
MBD1-220ENST00000589758 GGT6Q6P531 493 aa22.7■■□□□ 1.22
MBD1-220ENST00000589758 NPATQ14207 1427 aa22.7■■□□□ 1.22
MBD1-220ENST00000589758 DHX29Q7Z478 1369 aaKnown RBP22.68■■□□□ 1.22
MBD1-220ENST00000589758 CLTCQ00610 1675 aaKnown RBP22.67■■□□□ 1.22
MBD1-220ENST00000589758 ARHGEF5Q12774 1597 aa22.65■■□□□ 1.22
MBD1-220ENST00000589758 STRCQ7RTU9 1775 aa22.65■■□□□ 1.22
MBD1-220ENST00000589758 TSPY4P0CV99 314 aa22.64■■□□□ 1.21
MBD1-220ENST00000589758 TSPY10P0CW01 314 aa22.64■■□□□ 1.21
MBD1-220ENST00000589758 KANK4Q5T7N3 995 aaPredicted RBP22.63■■□□□ 1.21
MBD1-220ENST00000589758 MIA2Q96PC5 1412 aa22.6■■□□□ 1.21
MBD1-220ENST00000589758 APLP2Q06481 763 aa22.6■■□□□ 1.21
MBD1-220ENST00000589758 CERKQ8TCT0 537 aa22.6■■□□□ 1.21
MBD1-220ENST00000589758 KIF3BO15066 747 aa22.59■■□□□ 1.21
MBD1-220ENST00000589758 PTPRTO14522 1441 aa22.58■■□□□ 1.21
MBD1-220ENST00000589758 PTPRKQ15262 1439 aa22.57■■□□□ 1.2
MBD1-220ENST00000589758 MYOM3Q5VTT5 1437 aa22.57■■□□□ 1.2
MBD1-220ENST00000589758 FAM135AQ9P2D6 1515 aa22.56■■□□□ 1.2
MBD1-220ENST00000589758 NCOA1Q15788 1441 aa22.56■■□□□ 1.2
MBD1-220ENST00000589758 MAST1Q9Y2H9 1570 aa22.55■■□□□ 1.2
MBD1-220ENST00000589758 CAMSAP1Q5T5Y3 1602 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms