RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 RICTORQ6R327 1708 aa25.99■■□□□ 1.75
DNMT1-221ENST00000589538 FRMPD1Q5SYB0 1578 aa25.99■■□□□ 1.75
DNMT1-221ENST00000589538 CDC42BPAQ5VT25 1732 aa25.97■■□□□ 1.75
DNMT1-221ENST00000589538 TIAM1Q13009 1591 aa25.97■■□□□ 1.75
DNMT1-221ENST00000589538 SCAPERQ9BY12 1400 aa25.97■■□□□ 1.75
DNMT1-221ENST00000589538 MAP3K1Q13233 1512 aa25.95■■□□□ 1.74
DNMT1-221ENST00000589538 POGZQ7Z3K3 1410 aa25.93■■□□□ 1.74
DNMT1-221ENST00000589538 CCNB3Q8WWL7 1395 aa25.93■■□□□ 1.74
DNMT1-221ENST00000589538 ZMYM4Q5VZL5 1548 aa25.92■■□□□ 1.74
DNMT1-221ENST00000589538 GPATCH8Q9UKJ3 1502 aaKnown RBP25.91■■□□□ 1.74
DNMT1-221ENST00000589538 AEBP2Q6ZN18 517 aaPredicted RBP25.9■■□□□ 1.74
DNMT1-221ENST00000589538 MAGI2Q86UL8 1455 aa25.9■■□□□ 1.74
DNMT1-221ENST00000589538 SUPT6HQ7KZ85 1726 aaKnown RBP25.89■■□□□ 1.74
DNMT1-221ENST00000589538 ZNF518AQ6AHZ1 1483 aa25.88■■□□□ 1.73
DNMT1-221ENST00000589538 ABCC1P33527 1531 aa25.87■■□□□ 1.73
DNMT1-221ENST00000589538 ARHGEF40Q8TER5 1519 aa25.87■■□□□ 1.73
DNMT1-221ENST00000589538 ITSN2Q9NZM3 1697 aa25.87■■□□□ 1.73
DNMT1-221ENST00000589538 APLP2Q06481 763 aa25.86■■□□□ 1.73
DNMT1-221ENST00000589538 LRRC9Q6ZRR7 1453 aa25.85■■□□□ 1.73
DNMT1-221ENST00000589538 CFDP1Q9UEE9 299 aaPredicted RBP25.85■■□□□ 1.73
DNMT1-221ENST00000589538 ZFYVE16Q7Z3T8 1539 aa25.83■■□□□ 1.73
DNMT1-221ENST00000589538 PLEKHH2Q8IVE3 1493 aa25.83■■□□□ 1.73
DNMT1-221ENST00000589538 KDM4FA0A1W2PPD8 638 aa25.82■■□□□ 1.72
DNMT1-221ENST00000589538 NCOA2Q15596 1464 aa25.82■■□□□ 1.72
DNMT1-221ENST00000589538 KDM5CP41229 1560 aa25.81■■□□□ 1.72
DNMT1-221ENST00000589538 ZNF777Q9ULD5 760 aaPredicted RBP25.8■■□□□ 1.72
DNMT1-221ENST00000589538 SAMD9LQ8IVG5 1584 aa25.8■■□□□ 1.72
DNMT1-221ENST00000589538 KIAA1107Q9UPP5 1409 aa25.79■■□□□ 1.72
DNMT1-221ENST00000589538 AFAP1Q8N556 730 aa25.77■■□□□ 1.72
DNMT1-221ENST00000589538 ARHGEF12Q9NZN5 1544 aa25.76■■□□□ 1.71
DNMT1-221ENST00000589538 HECW2Q9P2P5 1572 aa25.75■■□□□ 1.71
DNMT1-221ENST00000589538 SYCP2Q9BX26 1530 aa25.74■■□□□ 1.71
DNMT1-221ENST00000589538 YEATS2Q9ULM3 1422 aa25.74■■□□□ 1.71
DNMT1-221ENST00000589538 MLH3Q9UHC1 1453 aa25.73■■□□□ 1.71
DNMT1-221ENST00000589538 TRAPPC8Q9Y2L5 1435 aa25.73■■□□□ 1.71
DNMT1-221ENST00000589538 KANK4Q5T7N3 995 aaPredicted RBP25.73■■□□□ 1.71
DNMT1-221ENST00000589538 MYT1LQ9UL68 1186 aa25.72■■□□□ 1.71
DNMT1-221ENST00000589538 ATP10AO60312 1499 aa25.72■■□□□ 1.71
DNMT1-221ENST00000589538 ARID4BQ4LE39 1312 aaPredicted RBP25.7■■□□□ 1.71
DNMT1-221ENST00000589538 C9orf84Q5VXU9 1444 aa25.69■■□□□ 1.7
DNMT1-221ENST00000589538 HNRNPMP52272 730 aaKnown RBP eCLIP25.68■■□□□ 1.7
DNMT1-221ENST00000589538 BCORL1Q5H9F3 1711 aa25.67■■□□□ 1.7
DNMT1-221ENST00000589538 SPAG9O60271 1321 aaKnown RBP25.64■■□□□ 1.7
DNMT1-221ENST00000589538 REREQ9P2R6 1566 aa25.64■■□□□ 1.69
DNMT1-221ENST00000589538 DIP2CQ9Y2E4 1556 aa25.64■■□□□ 1.69
DNMT1-221ENST00000589538 ZNF644Q9H582 1327 aaPredicted RBP25.63■■□□□ 1.69
DNMT1-221ENST00000589538 CAMSAP2Q08AD1 1489 aa25.63■■□□□ 1.69
DNMT1-221ENST00000589538 ADAMTSL3P82987 1691 aa25.63■■□□□ 1.69
DNMT1-221ENST00000589538 KIDINS220Q9ULH0 1771 aa25.63■■□□□ 1.69
DNMT1-221ENST00000589538 MYOM3Q5VTT5 1437 aa25.63■■□□□ 1.69
DNMT1-221ENST00000589538 MIA2Q96PC5 1412 aa25.63■■□□□ 1.69
DNMT1-221ENST00000589538 RSPH4AQ5TD94 716 aa25.62■■□□□ 1.69
DNMT1-221ENST00000589538 ABCA6Q8N139 1617 aa25.62■■□□□ 1.69
DNMT1-221ENST00000589538 MBD5Q9P267 1494 aa25.61■■□□□ 1.69
DNMT1-221ENST00000589538 ATP7AQ04656 1500 aa25.58■■□□□ 1.69
DNMT1-221ENST00000589538 INO80Q9ULG1 1556 aaPredicted RBP25.58■■□□□ 1.69
DNMT1-221ENST00000589538 SIGLEC1Q9BZZ2 1709 aa25.57■■□□□ 1.68
DNMT1-221ENST00000589538 CCDC141Q6ZP82 1450 aa25.57■■□□□ 1.68
DNMT1-221ENST00000589538 ARHGEF5Q12774 1597 aa25.56■■□□□ 1.68
DNMT1-221ENST00000589538 RTEL1-TNFRSF6BF6WH68 1400 aa25.54■■□□□ 1.68
DNMT1-221ENST00000589538 AGLP35573 1532 aa25.54■■□□□ 1.68
DNMT1-221ENST00000589538 MADDQ8WXG6 1647 aa25.53■■□□□ 1.68
DNMT1-221ENST00000589538 ADGBQ8N7X0 1667 aa25.49■■□□□ 1.67
DNMT1-221ENST00000589538 PTPRMP28827 1452 aa25.49■■□□□ 1.67
DNMT1-221ENST00000589538 TSPY4P0CV99 314 aa25.49■■□□□ 1.67
DNMT1-221ENST00000589538 TSPY10P0CW01 314 aa25.49■■□□□ 1.67
DNMT1-221ENST00000589538 MLECQ14165 292 aa25.48■■□□□ 1.67
DNMT1-221ENST00000589538 FER1L4A9Z1Z3 1794 aa25.47■■□□□ 1.67
DNMT1-221ENST00000589538 PTPN23Q9H3S7 1636 aa25.47■■□□□ 1.67
DNMT1-221ENST00000589538 A2MP01023 1474 aa25.47■■□□□ 1.67
DNMT1-221ENST00000589538 FGD6Q6ZV73 1430 aa25.46■■□□□ 1.67
DNMT1-221ENST00000589538 RIMS1Q86UR5 1692 aaKnown RBP25.46■■□□□ 1.67
DNMT1-221ENST00000589538 PLXNC1O60486 1568 aa25.44■■□□□ 1.66
DNMT1-221ENST00000589538 MAST1Q9Y2H9 1570 aa25.42■■□□□ 1.66
DNMT1-221ENST00000589538 TCOF1Q13428 1488 aaKnown RBP25.41■■□□□ 1.66
DNMT1-221ENST00000589538 ESF1Q9H501 851 aaKnown RBP25.38■■□□□ 1.65
DNMT1-221ENST00000589538 DHX29Q7Z478 1369 aaKnown RBP25.38■■□□□ 1.65
DNMT1-221ENST00000589538 SHANK2Q9UPX8 1470 aa25.35■■□□□ 1.65
DNMT1-221ENST00000589538 DNMT1P26358 1616 aaKnown RBP25.34■■□□□ 1.65
DNMT1-221ENST00000589538 CROCC2H7BZ55 1655 aa25.34■■□□□ 1.65
DNMT1-221ENST00000589538 CNTLNQ9NXG0 1405 aa25.34■■□□□ 1.65
DNMT1-221ENST00000589538 PPP6R1Q9UPN7 881 aa25.32■■□□□ 1.64
DNMT1-221ENST00000589538 ABCC5O15440 1437 aa25.31■■□□□ 1.64
DNMT1-221ENST00000589538 DAPK1P53355 1430 aa25.31■■□□□ 1.64
DNMT1-221ENST00000589538 FAM50AQ14320 339 aaKnown RBP25.27■■□□□ 1.64
DNMT1-221ENST00000589538 MROH2AA6NES4 1674 aa25.26■■□□□ 1.63
DNMT1-221ENST00000589538 GGT6Q6P531 493 aa25.26■■□□□ 1.63
DNMT1-221ENST00000589538 KIF3BO15066 747 aa25.25■■□□□ 1.63
DNMT1-221ENST00000589538 DUOX2Q9NRD8 1548 aa25.25■■□□□ 1.63
DNMT1-221ENST00000589538 FAM135AQ9P2D6 1515 aa25.24■■□□□ 1.63
DNMT1-221ENST00000589538 EIF2AK4Q9P2K8 1649 aaKnown RBP25.23■■□□□ 1.63
DNMT1-221ENST00000589538 PLPPR3Q6T4P5 718 aa25.23■■□□□ 1.63
DNMT1-221ENST00000589538 C3P01024 1663 aa25.23■■□□□ 1.63
DNMT1-221ENST00000589538 ANKRD30AQ9BXX3 1397 aa25.21■■□□□ 1.63
DNMT1-221ENST00000589538 PPARGC1BQ86YN6 1023 aaKnown RBP25.21■■□□□ 1.63
DNMT1-221ENST00000589538 KIF15Q9NS87 1388 aa25.2■■□□□ 1.63
DNMT1-221ENST00000589538 CLTCQ00610 1675 aaKnown RBP25.2■■□□□ 1.62
DNMT1-221ENST00000589538 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.19■■□□□ 1.62
DNMT1-221ENST00000589538 SETD1BQ9UPS6 1966 aaKnown RBP25.19■■□□□ 1.62
DNMT1-221ENST00000589538 CEBPAP49715 358 aaPredicted RBP25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms