RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 EHBP1L1Q8N3D4 1523 aa14.82□□□□□ -0.04
VPS25-202ENST00000589219 POTEDQ86YR6 584 aa14.81□□□□□ -0.04
VPS25-202ENST00000589219 ARAP3Q8WWN8 1544 aa14.81□□□□□ -0.04
VPS25-202ENST00000589219 NUP153P49790 1475 aaKnown RBP14.79□□□□□ -0.04
VPS25-202ENST00000589219 PLEKHD1A6NEE1 506 aa14.77□□□□□ -0.05
VPS25-202ENST00000589219 NEO1Q92859 1461 aa14.76□□□□□ -0.05
VPS25-202ENST00000589219 DHX57Q6P158 1386 aaKnown RBP14.76□□□□□ -0.05
VPS25-202ENST00000589219 LRRIQ1Q96JM4 1722 aa14.75□□□□□ -0.05
VPS25-202ENST00000589219 SUPT6HQ7KZ85 1726 aaKnown RBP14.75□□□□□ -0.05
VPS25-202ENST00000589219 MTUS2Q5JR59 1369 aa14.73□□□□□ -0.05
VPS25-202ENST00000589219 FGD6Q6ZV73 1430 aa14.72□□□□□ -0.05
VPS25-202ENST00000589219 CFAP74Q9C0B2 1584 aa14.7□□□□□ -0.06
VPS25-202ENST00000589219 ATP1B4Q9UN42 357 aaPredicted RBP14.7□□□□□ -0.06
VPS25-202ENST00000589219 NCOA2Q15596 1464 aa14.69□□□□□ -0.06
VPS25-202ENST00000589219 RAPGEF3O95398 923 aa14.69□□□□□ -0.06
VPS25-202ENST00000589219 MYOM3Q5VTT5 1437 aa14.68□□□□□ -0.06
VPS25-202ENST00000589219 SETD5Q9C0A6 1442 aa14.68□□□□□ -0.06
VPS25-202ENST00000589219 RAB3GAP2Q9H2M9 1393 aa14.67□□□□□ -0.06
VPS25-202ENST00000589219 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.66□□□□□ -0.06
VPS25-202ENST00000589219 FANCAO15360 1455 aa14.66□□□□□ -0.06
VPS25-202ENST00000589219 DENND4BO75064 1496 aaPredicted RBP14.65□□□□□ -0.06
VPS25-202ENST00000589219 CDK11AQ9UQ88 783 aaPredicted RBP14.65□□□□□ -0.06
VPS25-202ENST00000589219 CDK13Q14004 1512 aaKnown RBP14.65□□□□□ -0.06
VPS25-202ENST00000589219 AKNAQ7Z591 1439 aa14.65□□□□□ -0.06
VPS25-202ENST00000589219 FRMPD1Q5SYB0 1578 aa14.64□□□□□ -0.07
VPS25-202ENST00000589219 TTC37Q6PGP7 1564 aa14.64□□□□□ -0.07
VPS25-202ENST00000589219 HECW2Q9P2P5 1572 aa14.64□□□□□ -0.07
VPS25-202ENST00000589219 RICTORQ6R327 1708 aa14.63□□□□□ -0.07
VPS25-202ENST00000589219 TCOF1Q13428 1488 aaKnown RBP14.63□□□□□ -0.07
VPS25-202ENST00000589219 FAM50AQ14320 339 aaKnown RBP14.63□□□□□ -0.07
VPS25-202ENST00000589219 PTPN23Q9H3S7 1636 aa14.62□□□□□ -0.07
VPS25-202ENST00000589219 ZNF316A6NFI3 1004 aaPredicted RBP14.61□□□□□ -0.07
VPS25-202ENST00000589219 ADAMTSL3P82987 1691 aa14.61□□□□□ -0.07
VPS25-202ENST00000589219 ARID4BQ4LE39 1312 aaPredicted RBP14.61□□□□□ -0.07
VPS25-202ENST00000589219 BCORL1Q5H9F3 1711 aa14.6□□□□□ -0.07
VPS25-202ENST00000589219 ARHGEF40Q8TER5 1519 aa14.6□□□□□ -0.07
VPS25-202ENST00000589219 MIA2Q96PC5 1412 aa14.59□□□□□ -0.07
VPS25-202ENST00000589219 MYO5CQ9NQX4 1742 aa14.59□□□□□ -0.07
VPS25-202ENST00000589219 ITGAEP38570 1179 aa14.59□□□□□ -0.07
VPS25-202ENST00000589219 PLCH2O75038 1416 aa14.58□□□□□ -0.07
VPS25-202ENST00000589219 HFM1A2PYH4 1435 aa14.58□□□□□ -0.08
VPS25-202ENST00000589219 MAGI2Q86UL8 1455 aa14.57□□□□□ -0.08
VPS25-202ENST00000589219 ZMYM4Q5VZL5 1548 aa14.57□□□□□ -0.08
VPS25-202ENST00000589219 PTPRMP28827 1452 aa14.57□□□□□ -0.08
VPS25-202ENST00000589219 KIF14Q15058 1648 aa14.56□□□□□ -0.08
VPS25-202ENST00000589219 EFCAB2Q5VUJ9 269 aa14.56□□□□□ -0.08
VPS25-202ENST00000589219 POGZQ7Z3K3 1410 aa14.56□□□□□ -0.08
VPS25-202ENST00000589219 DIEXFQ68CQ4 756 aaKnown RBP14.55□□□□□ -0.08
VPS25-202ENST00000589219 TROQ12816 1431 aaPredicted RBP14.55□□□□□ -0.08
VPS25-202ENST00000589219 ZFYVE16Q7Z3T8 1539 aa14.55□□□□□ -0.08
VPS25-202ENST00000589219 SCAPERQ9BY12 1400 aa14.54□□□□□ -0.08
VPS25-202ENST00000589219 MADDQ8WXG6 1647 aa14.54□□□□□ -0.08
VPS25-202ENST00000589219 GCC2Q8IWJ2 1684 aa14.54□□□□□ -0.08
VPS25-202ENST00000589219 RIMS1Q86UR5 1692 aaKnown RBP14.5□□□□□ -0.09
VPS25-202ENST00000589219 ITSN2Q9NZM3 1697 aa14.5□□□□□ -0.09
VPS25-202ENST00000589219 ARHGAP5Q13017 1502 aa14.5□□□□□ -0.09
VPS25-202ENST00000589219 PTPRKQ15262 1439 aa14.49□□□□□ -0.09
VPS25-202ENST00000589219 YEATS2Q9ULM3 1422 aa14.49□□□□□ -0.09
VPS25-202ENST00000589219 NAIPQ13075 1403 aa14.49□□□□□ -0.09
VPS25-202ENST00000589219 ZNF518AQ6AHZ1 1483 aa14.48□□□□□ -0.09
VPS25-202ENST00000589219 ATP10AO60312 1499 aa14.47□□□□□ -0.09
VPS25-202ENST00000589219 CDC42BPBQ9Y5S2 1711 aa14.46□□□□□ -0.09
VPS25-202ENST00000589219 DNMT1P26358 1616 aaKnown RBP14.46□□□□□ -0.09
VPS25-202ENST00000589219 ILDR1Q86SU0 546 aaPredicted RBP14.46□□□□□ -0.09
VPS25-202ENST00000589219 TIMELESSQ9UNS1 1208 aa14.46□□□□□ -0.09
VPS25-202ENST00000589219 ACIN1Q9UKV3 1341 aaKnown RBP14.45□□□□□ -0.1
VPS25-202ENST00000589219 FER1L4A9Z1Z3 1794 aa14.45□□□□□ -0.1
VPS25-202ENST00000589219 C9orf84Q5VXU9 1444 aa14.45□□□□□ -0.1
VPS25-202ENST00000589219 SIGLEC1Q9BZZ2 1709 aa14.45□□□□□ -0.1
VPS25-202ENST00000589219 PREX2Q70Z35 1606 aa14.44□□□□□ -0.1
VPS25-202ENST00000589219 KDM5CP41229 1560 aa14.43□□□□□ -0.1
VPS25-202ENST00000589219 MLECQ14165 292 aa14.43□□□□□ -0.1
VPS25-202ENST00000589219 MYT1LQ9UL68 1186 aa14.43□□□□□ -0.1
VPS25-202ENST00000589219 ROCK1Q13464 1354 aa14.43□□□□□ -0.1
VPS25-202ENST00000589219 AFAP1Q8N556 730 aa14.42□□□□□ -0.1
VPS25-202ENST00000589219 DAPK1P53355 1430 aa14.41□□□□□ -0.1
VPS25-202ENST00000589219 LMTK3Q96Q04 1460 aa14.41□□□□□ -0.1
VPS25-202ENST00000589219 CDC42BPAQ5VT25 1732 aa14.41□□□□□ -0.1
VPS25-202ENST00000589219 ARHGEF12Q9NZN5 1544 aa14.4□□□□□ -0.1
VPS25-202ENST00000589219 ABCC1P33527 1531 aa14.39□□□□□ -0.11
VPS25-202ENST00000589219 MLH3Q9UHC1 1453 aa14.38□□□□□ -0.11
VPS25-202ENST00000589219 ADGBQ8N7X0 1667 aa14.38□□□□□ -0.11
VPS25-202ENST00000589219 REREQ9P2R6 1566 aa14.38□□□□□ -0.11
VPS25-202ENST00000589219 CAMSAP2Q08AD1 1489 aa14.38□□□□□ -0.11
VPS25-202ENST00000589219 CROCC2H7BZ55 1655 aa14.37□□□□□ -0.11
VPS25-202ENST00000589219 DIP2CQ9Y2E4 1556 aa14.37□□□□□ -0.11
VPS25-202ENST00000589219 ABCC5O15440 1437 aa14.36□□□□□ -0.11
VPS25-202ENST00000589219 GPATCH8Q9UKJ3 1502 aaKnown RBP14.36□□□□□ -0.11
VPS25-202ENST00000589219 TRAPPC8Q9Y2L5 1435 aa14.35□□□□□ -0.11
VPS25-202ENST00000589219 ADGRL2O95490 1459 aa14.35□□□□□ -0.11
VPS25-202ENST00000589219 ABCA6Q8N139 1617 aa14.34□□□□□ -0.11
VPS25-202ENST00000589219 SETD1BQ9UPS6 1966 aaKnown RBP14.34□□□□□ -0.11
VPS25-202ENST00000589219 PREX1Q8TCU6 1659 aa14.33□□□□□ -0.11
VPS25-202ENST00000589219 SHANK2Q9UPX8 1470 aa14.33□□□□□ -0.12
VPS25-202ENST00000589219 ESF1Q9H501 851 aaKnown RBP14.33□□□□□ -0.12
VPS25-202ENST00000589219 ZNF777Q9ULD5 760 aaPredicted RBP14.33□□□□□ -0.12
VPS25-202ENST00000589219 KIDINS220Q9ULH0 1771 aa14.32□□□□□ -0.12
VPS25-202ENST00000589219 AGLP35573 1532 aa14.32□□□□□ -0.12
VPS25-202ENST00000589219 HSPA2P54652 639 aa14.32□□□□□ -0.12
VPS25-202ENST00000589219 PLEKHH2Q8IVE3 1493 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms