RNA–Protein interactions for RNA: ENST00000589140.1

SEPT9-223, Transcript of septin 9, human

TSL 4

Gene SEPT9, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEPT9-223	ENST00000589140	BCORL1	Q5H9F3	1711 aa		31.86	■■■□□ 2.69
SEPT9-223	ENST00000589140	MAGI2	Q86UL8	1455 aa		31.84	■■■□□ 2.69
SEPT9-223	ENST00000589140	POGZ	Q7Z3K3	1410 aa		31.84	■■■□□ 2.69
SEPT9-223	ENST00000589140	ZFYVE16	Q7Z3T8	1539 aa		31.83	■■■□□ 2.69
SEPT9-223	ENST00000589140	ARID4B	Q4LE39	1312 aa	Predicted RBP	31.82	■■■□□ 2.68
SEPT9-223	ENST00000589140	ARHGAP5	Q13017	1502 aa		31.81	■■■□□ 2.68
SEPT9-223	ENST00000589140	YEATS2	Q9ULM3	1422 aa		31.8	■■■□□ 2.68
SEPT9-223	ENST00000589140	HECW2	Q9P2P5	1572 aa		31.79	■■■□□ 2.68
SEPT9-223	ENST00000589140	CDC42BPB	Q9Y5S2	1711 aa		31.79	■■■□□ 2.68
SEPT9-223	ENST00000589140	PTPRM	P28827	1452 aa		31.76	■■■□□ 2.67
SEPT9-223	ENST00000589140	PREX2	Q70Z35	1606 aa		31.75	■■■□□ 2.67
SEPT9-223	ENST00000589140	MADD	Q8WXG6	1647 aa		31.75	■■■□□ 2.67
SEPT9-223	ENST00000589140	SIGLEC1	Q9BZZ2	1709 aa		31.72	■■■□□ 2.67
SEPT9-223	ENST00000589140	ZNF518A	Q6AHZ1	1483 aa		31.72	■■■□□ 2.67
SEPT9-223	ENST00000589140	CDC42BPA	Q5VT25	1732 aa		31.69	■■■□□ 2.66
SEPT9-223	ENST00000589140	KDM5C	P41229	1560 aa		31.68	■■■□□ 2.66
SEPT9-223	ENST00000589140	ATP10A	O60312	1499 aa		31.65	■■■□□ 2.66
SEPT9-223	ENST00000589140	CEP162	Q5TB80	1403 aa		31.65	■■■□□ 2.66
SEPT9-223	ENST00000589140	RIMS1	Q86UR5	1692 aa	Known RBP	31.64	■■■□□ 2.66
SEPT9-223	ENST00000589140	AFAP1	Q8N556	730 aa		31.64	■■■□□ 2.66
SEPT9-223	ENST00000589140	ABCC1	P33527	1531 aa		31.63	■■■□□ 2.65
SEPT9-223	ENST00000589140	C9orf84	Q5VXU9	1444 aa		31.62	■■■□□ 2.65
SEPT9-223	ENST00000589140	ITSN2	Q9NZM3	1697 aa		31.6	■■■□□ 2.65
SEPT9-223	ENST00000589140	ARHGEF12	Q9NZN5	1544 aa		31.59	■■■□□ 2.65
SEPT9-223	ENST00000589140	GPATCH8	Q9UKJ3	1502 aa	Known RBP	31.56	■■■□□ 2.64
SEPT9-223	ENST00000589140	TRAPPC8	Q9Y2L5	1435 aa		31.56	■■■□□ 2.64
SEPT9-223	ENST00000589140	MLH3	Q9UHC1	1453 aa		31.55	■■■□□ 2.64
SEPT9-223	ENST00000589140	FER1L4	A9Z1Z3	1794 aa		31.54	■■■□□ 2.64
SEPT9-223	ENST00000589140	MLEC	Q14165	292 aa		31.54	■■■□□ 2.64
SEPT9-223	ENST00000589140	MTUS2	Q5JR59	1369 aa		31.54	■■■□□ 2.64
SEPT9-223	ENST00000589140	DIP2C	Q9Y2E4	1556 aa		31.53	■■■□□ 2.64
SEPT9-223	ENST00000589140	MYT1L	Q9UL68	1186 aa		31.52	■■■□□ 2.64
SEPT9-223	ENST00000589140	SAMD9L	Q8IVG5	1584 aa		31.51	■■■□□ 2.63
SEPT9-223	ENST00000589140	ABCA6	Q8N139	1617 aa		31.5	■■■□□ 2.63
SEPT9-223	ENST00000589140	RERE	Q9P2R6	1566 aa		31.5	■■■□□ 2.63
SEPT9-223	ENST00000589140	ZNF777	Q9ULD5	760 aa	Predicted RBP	31.48	■■■□□ 2.63
SEPT9-223	ENST00000589140	CCNB3	Q8WWL7	1395 aa		31.46	■■■□□ 2.63
SEPT9-223	ENST00000589140	EHBP1L1	Q8N3D4	1523 aa		31.46	■■■□□ 2.63
SEPT9-223	ENST00000589140	KIDINS220	Q9ULH0	1771 aa		31.45	■■■□□ 2.63
SEPT9-223	ENST00000589140	SYCP2	Q9BX26	1530 aa		31.44	■■■□□ 2.62
SEPT9-223	ENST00000589140	LOC105371045	A0A1W2PR82	267 aa		31.44	■■■□□ 2.62
SEPT9-223	ENST00000589140	CFDP1	Q9UEE9	299 aa	Predicted RBP	31.43	■■■□□ 2.62
SEPT9-223	ENST00000589140	LMTK3	Q96Q04	1460 aa		31.43	■■■□□ 2.62
SEPT9-223	ENST00000589140	KIAA1107	Q9UPP5	1409 aa		31.41	■■■□□ 2.62
SEPT9-223	ENST00000589140	PLEKHH2	Q8IVE3	1493 aa		31.4	■■■□□ 2.62
SEPT9-223	ENST00000589140	PLPPR3	Q6T4P5	718 aa		31.4	■■■□□ 2.62
SEPT9-223	ENST00000589140	TIAM1	Q13009	1591 aa		31.39	■■■□□ 2.62
SEPT9-223	ENST00000589140	AGL	P35573	1532 aa		31.39	■■■□□ 2.61
SEPT9-223	ENST00000589140	HNRNPM	P52272	730 aa	Known RBP eCLIP	31.37	■■■□□ 2.61	3e-7	■■■■■ 27.8
SEPT9-223	ENST00000589140	SPAG9	O60271	1321 aa	Known RBP	31.33	■■■□□ 2.61
SEPT9-223	ENST00000589140	VPS8	Q8N3P4	1428 aa		31.32	■■■□□ 2.6
SEPT9-223	ENST00000589140	SUPT6H	Q7KZ85	1726 aa	Known RBP	31.29	■■■□□ 2.6
SEPT9-223	ENST00000589140	INO80	Q9ULG1	1556 aa	Predicted RBP	31.29	■■■□□ 2.6
SEPT9-223	ENST00000589140	ATP7A	Q04656	1500 aa		31.29	■■■□□ 2.6
SEPT9-223	ENST00000589140	NCOA2	Q15596	1464 aa		31.26	■■■□□ 2.59
SEPT9-223	ENST00000589140	ZNF644	Q9H582	1327 aa	Predicted RBP	31.25	■■■□□ 2.59
SEPT9-223	ENST00000589140	CEBPA	P49715	358 aa	Predicted RBP	31.25	■■■□□ 2.59
SEPT9-223	ENST00000589140	PREX1	Q8TCU6	1659 aa		31.23	■■■□□ 2.59
SEPT9-223	ENST00000589140	MBD5	Q9P267	1494 aa		31.22	■■■□□ 2.59
SEPT9-223	ENST00000589140	HSPA2	P54652	639 aa		31.22	■■■□□ 2.59
SEPT9-223	ENST00000589140	SETD1B	Q9UPS6	1966 aa	Known RBP	31.21	■■■□□ 2.59
SEPT9-223	ENST00000589140	C3	P01024	1663 aa		31.2	■■■□□ 2.59
SEPT9-223	ENST00000589140	ILDR1	Q86SU0	546 aa	Predicted RBP	31.2	■■■□□ 2.59
SEPT9-223	ENST00000589140	PLXNC1	O60486	1568 aa		31.19	■■■□□ 2.58
SEPT9-223	ENST00000589140	ESF1	Q9H501	851 aa	Known RBP	31.18	■■■□□ 2.58
SEPT9-223	ENST00000589140	A2M	P01023	1474 aa		31.17	■■■□□ 2.58
SEPT9-223	ENST00000589140	LRRC9	Q6ZRR7	1453 aa		31.17	■■■□□ 2.58
SEPT9-223	ENST00000589140	CNTLN	Q9NXG0	1405 aa		31.15	■■■□□ 2.58
SEPT9-223	ENST00000589140	MAP3K1	Q13233	1512 aa		31.15	■■■□□ 2.58
SEPT9-223	ENST00000589140	ADGB	Q8N7X0	1667 aa		31.15	■■■□□ 2.58
SEPT9-223	ENST00000589140	CAMSAP2	Q08AD1	1489 aa		31.13	■■■□□ 2.57
SEPT9-223	ENST00000589140	RTEL1-TNFRSF6B	F6WH68	1400 aa		31.12	■■■□□ 2.57
SEPT9-223	ENST00000589140	MROH2A	A6NES4	1674 aa		31.1	■■■□□ 2.57
SEPT9-223	ENST00000589140	CCDC141	Q6ZP82	1450 aa		31.09	■■■□□ 2.57
SEPT9-223	ENST00000589140	UHRF1BP1	Q6BDS2	1440 aa		31.09	■■■□□ 2.57
SEPT9-223	ENST00000589140	RSPH4A	Q5TD94	716 aa		31.06	■■■□□ 2.56
SEPT9-223	ENST00000589140	KANK4	Q5T7N3	995 aa	Predicted RBP	31.05	■■■□□ 2.56
SEPT9-223	ENST00000589140	ARHGEF5	Q12774	1597 aa		31.04	■■■□□ 2.56
SEPT9-223	ENST00000589140	CLTC	Q00610	1675 aa	Known RBP	31.03	■■■□□ 2.56
SEPT9-223	ENST00000589140	ZMYM3	Q14202	1370 aa		31.01	■■■□□ 2.55
SEPT9-223	ENST00000589140	GGT6	Q6P531	493 aa		31	■■■□□ 2.55
SEPT9-223	ENST00000589140	DHX29	Q7Z478	1369 aa	Known RBP	31	■■■□□ 2.55
SEPT9-223	ENST00000589140	NPAT	Q14207	1427 aa		30.98	■■■□□ 2.55
SEPT9-223	ENST00000589140	PPP6R1	Q9UPN7	881 aa		30.97	■■■□□ 2.55
SEPT9-223	ENST00000589140	STRC	Q7RTU9	1775 aa		30.97	■■■□□ 2.55
SEPT9-223	ENST00000589140	MYOM3	Q5VTT5	1437 aa		30.94	■■■□□ 2.54
SEPT9-223	ENST00000589140	MIA2	Q96PC5	1412 aa		30.93	■■■□□ 2.54
SEPT9-223	ENST00000589140	TSPY4	P0CV99	314 aa		30.92	■■■□□ 2.54
SEPT9-223	ENST00000589140	TSPY10	P0CW01	314 aa		30.92	■■■□□ 2.54
SEPT9-223	ENST00000589140	APLP2	Q06481	763 aa		30.9	■■■□□ 2.54
SEPT9-223	ENST00000589140	FBXO41	Q8TF61	875 aa		30.9	■■■□□ 2.54
SEPT9-223	ENST00000589140	MAST1	Q9Y2H9	1570 aa		30.88	■■■□□ 2.53
SEPT9-223	ENST00000589140	KIF3B	O15066	747 aa		30.87	■■■□□ 2.53
SEPT9-223	ENST00000589140	DMRT2	Q9Y5R5	561 aa		30.87	■■■□□ 2.53
SEPT9-223	ENST00000589140	PTPRK	Q15262	1439 aa		30.87	■■■□□ 2.53
SEPT9-223	ENST00000589140	FAM135A	Q9P2D6	1515 aa		30.83	■■■□□ 2.53
SEPT9-223	ENST00000589140	MYO3A	Q8NEV4	1616 aa		30.82	■■■□□ 2.52
SEPT9-223	ENST00000589140	ZNF142	P52746	1687 aa	Predicted RBP	30.8	■■■□□ 2.52
SEPT9-223	ENST00000589140	KDM5D	Q9BY66	1539 aa		30.79	■■■□□ 2.52
SEPT9-223	ENST00000589140	NCOA1	Q15788	1441 aa		30.79	■■■□□ 2.52

Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms