RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 ZEB1P37275 1124 aaPredicted RBP18.09■□□□□ 0.49
CCBE1-203ENST00000589116 FBXO41Q8TF61 875 aa18.08■□□□□ 0.48
CCBE1-203ENST00000589116 GPATCH8Q9UKJ3 1502 aaKnown RBP18.05■□□□□ 0.48
CCBE1-203ENST00000589116 CDC42BPAQ5VT25 1732 aa18.05■□□□□ 0.48
CCBE1-203ENST00000589116 ITGAEP38570 1179 aa18.04■□□□□ 0.48
CCBE1-203ENST00000589116 CCER1Q8TC90 406 aaPredicted RBP18.04■□□□□ 0.48
CCBE1-203ENST00000589116 DNMT1P26358 1616 aaKnown RBP18■□□□□ 0.47
CCBE1-203ENST00000589116 SETD5Q9C0A6 1442 aa18■□□□□ 0.47
CCBE1-203ENST00000589116 PREX2Q70Z35 1606 aa18■□□□□ 0.47
CCBE1-203ENST00000589116 CAMSAP2Q08AD1 1489 aa17.99■□□□□ 0.47
CCBE1-203ENST00000589116 AKNAQ7Z591 1439 aa17.98■□□□□ 0.47
CCBE1-203ENST00000589116 CFDP1Q9UEE9 299 aaPredicted RBP17.98■□□□□ 0.47
CCBE1-203ENST00000589116 PTPRKQ15262 1439 aa17.97■□□□□ 0.47
CCBE1-203ENST00000589116 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.97■□□□□ 0.47
CCBE1-203ENST00000589116 HFM1A2PYH4 1435 aa17.97■□□□□ 0.47
CCBE1-203ENST00000589116 RAB3GAP2Q9H2M9 1393 aa17.96■□□□□ 0.47
CCBE1-203ENST00000589116 TTC37Q6PGP7 1564 aa17.96■□□□□ 0.47
CCBE1-203ENST00000589116 MYO5CQ9NQX4 1742 aa17.95■□□□□ 0.46
CCBE1-203ENST00000589116 CDC42BPBQ9Y5S2 1711 aa17.95■□□□□ 0.46
CCBE1-203ENST00000589116 DAPK1P53355 1430 aa17.95■□□□□ 0.46
CCBE1-203ENST00000589116 PPRC1Q5VV67 1664 aaKnown RBP17.94■□□□□ 0.46
CCBE1-203ENST00000589116 WDR7Q9Y4E6 1490 aa17.94■□□□□ 0.46
CCBE1-203ENST00000589116 GCC2Q8IWJ2 1684 aa17.93■□□□□ 0.46
CCBE1-203ENST00000589116 CROCC2H7BZ55 1655 aa17.93■□□□□ 0.46
CCBE1-203ENST00000589116 GLI2P10070 1586 aa17.91■□□□□ 0.46
CCBE1-203ENST00000589116 ABCC5O15440 1437 aa17.91■□□□□ 0.46
CCBE1-203ENST00000589116 CLSPNQ9HAW4 1339 aa17.91■□□□□ 0.46
CCBE1-203ENST00000589116 ROCK1Q13464 1354 aa17.91■□□□□ 0.46
CCBE1-203ENST00000589116 DHX57Q6P158 1386 aaKnown RBP17.91■□□□□ 0.46
CCBE1-203ENST00000589116 NAIPQ13075 1403 aa17.9■□□□□ 0.46
CCBE1-203ENST00000589116 ASXL2Q76L83 1435 aa17.9■□□□□ 0.46
CCBE1-203ENST00000589116 ZNF644Q9H582 1327 aaPredicted RBP17.89■□□□□ 0.46
CCBE1-203ENST00000589116 COL17A1Q9UMD9 1497 aaPredicted RBP17.89■□□□□ 0.45
CCBE1-203ENST00000589116 ARAP3Q8WWN8 1544 aa17.89■□□□□ 0.45
CCBE1-203ENST00000589116 ARHGEF5Q12774 1597 aa17.89■□□□□ 0.45
CCBE1-203ENST00000589116 ADGBQ8N7X0 1667 aa17.89■□□□□ 0.45
CCBE1-203ENST00000589116 SHANK2Q9UPX8 1470 aa17.88■□□□□ 0.45
CCBE1-203ENST00000589116 ARHGAP5Q13017 1502 aa17.88■□□□□ 0.45
CCBE1-203ENST00000589116 SAMD9LQ8IVG5 1584 aa17.88■□□□□ 0.45
CCBE1-203ENST00000589116 LMTK3Q96Q04 1460 aa17.86■□□□□ 0.45
CCBE1-203ENST00000589116 ABCA9Q8IUA7 1624 aa17.86■□□□□ 0.45
CCBE1-203ENST00000589116 PLCH2O75038 1416 aa17.86■□□□□ 0.45
CCBE1-203ENST00000589116 PLEKHH2Q8IVE3 1493 aa17.86■□□□□ 0.45
CCBE1-203ENST00000589116 ADGRL2O95490 1459 aa17.85■□□□□ 0.45
CCBE1-203ENST00000589116 TEX14Q8IWB6 1497 aa17.85■□□□□ 0.45
CCBE1-203ENST00000589116 ZNF777Q9ULD5 760 aaPredicted RBP17.85■□□□□ 0.45
CCBE1-203ENST00000589116 KCNH8Q96L42 1107 aa17.84■□□□□ 0.45
CCBE1-203ENST00000589116 ACIN1Q9UKV3 1341 aaKnown RBP17.82■□□□□ 0.44
CCBE1-203ENST00000589116 MBD5Q9P267 1494 aa17.82■□□□□ 0.44
CCBE1-203ENST00000589116 KIAA1107Q9UPP5 1409 aa17.82■□□□□ 0.44
CCBE1-203ENST00000589116 RSPH4AQ5TD94 716 aa17.81■□□□□ 0.44
CCBE1-203ENST00000589116 CCDC141Q6ZP82 1450 aa17.81■□□□□ 0.44
CCBE1-203ENST00000589116 CHIC2Q9UKJ5 165 aa17.8■□□□□ 0.44
CCBE1-203ENST00000589116 MAP3K4Q9Y6R4 1608 aa17.79■□□□□ 0.44
CCBE1-203ENST00000589116 SYCP2Q9BX26 1530 aa17.79■□□□□ 0.44
CCBE1-203ENST00000589116 NCOA1Q15788 1441 aa17.78■□□□□ 0.44
CCBE1-203ENST00000589116 C9orf84Q5VXU9 1444 aa17.78■□□□□ 0.44
CCBE1-203ENST00000589116 RRP7BPQ9NSQ0 103 aa17.78■□□□□ 0.44
CCBE1-203ENST00000589116 MAST1Q9Y2H9 1570 aa17.78■□□□□ 0.44
CCBE1-203ENST00000589116 ABCC1P33527 1531 aa17.77■□□□□ 0.44
CCBE1-203ENST00000589116 EFCAB2Q5VUJ9 269 aa17.77■□□□□ 0.44
CCBE1-203ENST00000589116 ANKRD30AQ9BXX3 1397 aa17.77■□□□□ 0.44
CCBE1-203ENST00000589116 TSPY4P0CV99 314 aa17.74■□□□□ 0.43
CCBE1-203ENST00000589116 TSPY10P0CW01 314 aa17.74■□□□□ 0.43
CCBE1-203ENST00000589116 HNRNPMP52272 730 aaKnown RBP eCLIP17.73■□□□□ 0.43
CCBE1-203ENST00000589116 CFAP74Q9C0B2 1584 aa17.72■□□□□ 0.43
CCBE1-203ENST00000589116 FANCAO15360 1455 aa17.71■□□□□ 0.43
CCBE1-203ENST00000589116 PLXNC1O60486 1568 aa17.7■□□□□ 0.42
CCBE1-203ENST00000589116 ARHGEF12Q9NZN5 1544 aa17.7■□□□□ 0.42
CCBE1-203ENST00000589116 SOCS7O14512 581 aa17.67■□□□□ 0.42
CCBE1-203ENST00000589116 ANKRD50Q9ULJ7 1429 aa17.67■□□□□ 0.42
CCBE1-203ENST00000589116 CD109Q6YHK3 1445 aa17.66■□□□□ 0.42
CCBE1-203ENST00000589116 KIF15Q9NS87 1388 aa17.66■□□□□ 0.42
CCBE1-203ENST00000589116 TRAPPC8Q9Y2L5 1435 aa17.63■□□□□ 0.41
CCBE1-203ENST00000589116 RTEL1-TNFRSF6BF6WH68 1400 aa17.63■□□□□ 0.41
CCBE1-203ENST00000589116 DISP3Q9P2K9 1392 aa17.62■□□□□ 0.41
CCBE1-203ENST00000589116 PTPRMP28827 1452 aa17.61■□□□□ 0.41
CCBE1-203ENST00000589116 TRIM52Q96A61 297 aa17.61■□□□□ 0.41
CCBE1-203ENST00000589116 DUOX2Q9NRD8 1548 aa17.61■□□□□ 0.41
CCBE1-203ENST00000589116 ILDR2Q71H61 639 aa17.61■□□□□ 0.41
CCBE1-203ENST00000589116 ZFYVE16Q7Z3T8 1539 aa17.6■□□□□ 0.41
CCBE1-203ENST00000589116 KDM5DQ9BY66 1539 aa17.6■□□□□ 0.41
CCBE1-203ENST00000589116 NEO1Q92859 1461 aa17.6■□□□□ 0.41
CCBE1-203ENST00000589116 INO80Q9ULG1 1556 aaPredicted RBP17.6■□□□□ 0.41
CCBE1-203ENST00000589116 DENND4BO75064 1496 aaPredicted RBP17.59■□□□□ 0.41
CCBE1-203ENST00000589116 SCAPERQ9BY12 1400 aa17.59■□□□□ 0.41
CCBE1-203ENST00000589116 ERBINQ96RT1 1412 aa17.57■□□□□ 0.4
CCBE1-203ENST00000589116 MPHOSPH9Q99550 1183 aa17.57■□□□□ 0.4
CCBE1-203ENST00000589116 TIMELESSQ9UNS1 1208 aa17.57■□□□□ 0.4
CCBE1-203ENST00000589116 PZPP20742 1482 aa17.57■□□□□ 0.4
CCBE1-203ENST00000589116 ZNF518AQ6AHZ1 1483 aa17.57■□□□□ 0.4
CCBE1-203ENST00000589116 ATP7AQ04656 1500 aa17.56■□□□□ 0.4
CCBE1-203ENST00000589116 SPAG9O60271 1321 aaKnown RBP17.56■□□□□ 0.4
CCBE1-203ENST00000589116 UNC13BO14795 1591 aa17.56■□□□□ 0.4
CCBE1-203ENST00000589116 KDM5CP41229 1560 aa17.54■□□□□ 0.4
CCBE1-203ENST00000589116 ADAMTSL3P82987 1691 aa17.54■□□□□ 0.4
CCBE1-203ENST00000589116 POGZQ7Z3K3 1410 aa17.53■□□□□ 0.4
CCBE1-203ENST00000589116 AFAP1Q8N556 730 aa17.53■□□□□ 0.4
CCBE1-203ENST00000589116 CERKQ8TCT0 537 aa17.52■□□□□ 0.4
CCBE1-203ENST00000589116 SLC4A1APQ9BWU0 796 aaKnown RBP17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms