RNA–Protein interactions for RNA: ENST00000589064.5

MBD3-205, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 1,475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-205ENST00000589064 RICTORQ6R327 1708 aa33.1■■■□□ 2.89
MBD3-205ENST00000589064 POGZQ7Z3K3 1410 aa33.09■■■□□ 2.89
MBD3-205ENST00000589064 AFAP1Q8N556 730 aa33.08■■■□□ 2.89
MBD3-205ENST00000589064 MTUS2Q5JR59 1369 aa33.07■■■□□ 2.88
MBD3-205ENST00000589064 YEATS2Q9ULM3 1422 aa33.06■■■□□ 2.88
MBD3-205ENST00000589064 ZNF777Q9ULD5 760 aaPredicted RBP33.03■■■□□ 2.88
MBD3-205ENST00000589064 ZMYM4Q5VZL5 1548 aa33.03■■■□□ 2.88
MBD3-205ENST00000589064 MAGI2Q86UL8 1455 aa33.03■■■□□ 2.88
MBD3-205ENST00000589064 ZFYVE16Q7Z3T8 1539 aa32.99■■■□□ 2.87
MBD3-205ENST00000589064 ARHGEF40Q8TER5 1519 aa32.99■■■□□ 2.87
MBD3-205ENST00000589064 MYT1LQ9UL68 1186 aa32.99■■■□□ 2.87
MBD3-205ENST00000589064 GPATCH8Q9UKJ3 1502 aaKnown RBP32.98■■■□□ 2.87
MBD3-205ENST00000589064 CDC42BPBQ9Y5S2 1711 aa32.97■■■□□ 2.87
MBD3-205ENST00000589064 CCNB3Q8WWL7 1395 aa32.96■■■□□ 2.87
MBD3-205ENST00000589064 ZNF518AQ6AHZ1 1483 aa32.96■■■□□ 2.87
MBD3-205ENST00000589064 CFDP1Q9UEE9 299 aaPredicted RBP32.95■■■□□ 2.87
MBD3-205ENST00000589064 PREX2Q70Z35 1606 aa32.95■■■□□ 2.87
MBD3-205ENST00000589064 ARHGEF12Q9NZN5 1544 aa32.93■■■□□ 2.86
MBD3-205ENST00000589064 TRAPPC8Q9Y2L5 1435 aa32.93■■■□□ 2.86
MBD3-205ENST00000589064 VPS8Q8N3P4 1428 aa32.92■■■□□ 2.86
MBD3-205ENST00000589064 MLECQ14165 292 aa32.9■■■□□ 2.86
MBD3-205ENST00000589064 ATP10AO60312 1499 aa32.9■■■□□ 2.86
MBD3-205ENST00000589064 HNRNPMP52272 730 aaKnown RBP eCLIP32.89■■■□□ 2.86
MBD3-205ENST00000589064 CDC42BPAQ5VT25 1732 aa32.87■■■□□ 2.85
MBD3-205ENST00000589064 ABCC1P33527 1531 aa32.86■■■□□ 2.85
MBD3-205ENST00000589064 ADAMTSL3P82987 1691 aa32.86■■■□□ 2.85
MBD3-205ENST00000589064 EHBP1L1Q8N3D4 1523 aa32.85■■■□□ 2.85
MBD3-205ENST00000589064 KDM5CP41229 1560 aa32.84■■■□□ 2.85
MBD3-205ENST00000589064 BCORL1Q5H9F3 1711 aa32.83■■■□□ 2.85
MBD3-205ENST00000589064 PTPRMP28827 1452 aa32.83■■■□□ 2.85
MBD3-205ENST00000589064 C9orf84Q5VXU9 1444 aa32.82■■■□□ 2.85
MBD3-205ENST00000589064 MLH3Q9UHC1 1453 aa32.81■■■□□ 2.84
MBD3-205ENST00000589064 ZNF644Q9H582 1327 aaPredicted RBP32.81■■■□□ 2.84
MBD3-205ENST00000589064 SAMD9LQ8IVG5 1584 aa32.78■■■□□ 2.84
MBD3-205ENST00000589064 SIGLEC1Q9BZZ2 1709 aa32.77■■■□□ 2.84
MBD3-205ENST00000589064 KIAA1107Q9UPP5 1409 aa32.77■■■□□ 2.84
MBD3-205ENST00000589064 MADDQ8WXG6 1647 aa32.75■■■□□ 2.83
MBD3-205ENST00000589064 TIAM1Q13009 1591 aa32.75■■■□□ 2.83
MBD3-205ENST00000589064 SPAG9O60271 1321 aaKnown RBP32.75■■■□□ 2.83
MBD3-205ENST00000589064 KANK4Q5T7N3 995 aaPredicted RBP32.74■■■□□ 2.83
MBD3-205ENST00000589064 PLPPR3Q6T4P5 718 aa32.74■■■□□ 2.83
MBD3-205ENST00000589064 HECW2Q9P2P5 1572 aa32.74■■■□□ 2.83
MBD3-205ENST00000589064 ITSN2Q9NZM3 1697 aa32.74■■■□□ 2.83
MBD3-205ENST00000589064 SYCP2Q9BX26 1530 aa32.74■■■□□ 2.83
MBD3-205ENST00000589064 PLEKHH2Q8IVE3 1493 aa32.73■■■□□ 2.83
MBD3-205ENST00000589064 NCOA2Q15596 1464 aa32.73■■■□□ 2.83
MBD3-205ENST00000589064 LRRC9Q6ZRR7 1453 aa32.7■■■□□ 2.82
MBD3-205ENST00000589064 DIP2CQ9Y2E4 1556 aa32.69■■■□□ 2.82
MBD3-205ENST00000589064 APLP2Q06481 763 aa32.65■■■□□ 2.82
MBD3-205ENST00000589064 ABCA6Q8N139 1617 aa32.64■■■□□ 2.82
MBD3-205ENST00000589064 MAP3K1Q13233 1512 aa32.62■■■□□ 2.81
MBD3-205ENST00000589064 SUPT6HQ7KZ85 1726 aaKnown RBP32.62■■■□□ 2.81
MBD3-205ENST00000589064 RIMS1Q86UR5 1692 aaKnown RBP32.62■■■□□ 2.81
MBD3-205ENST00000589064 KIDINS220Q9ULH0 1771 aa32.61■■■□□ 2.81
MBD3-205ENST00000589064 MBD5Q9P267 1494 aa32.61■■■□□ 2.81
MBD3-205ENST00000589064 REREQ9P2R6 1566 aa32.59■■■□□ 2.81
MBD3-205ENST00000589064 CEBPAP49715 358 aaPredicted RBP32.57■■■□□ 2.8
MBD3-205ENST00000589064 AGLP35573 1532 aa32.55■■■□□ 2.8
MBD3-205ENST00000589064 RSPH4AQ5TD94 716 aa32.54■■■□□ 2.8
MBD3-205ENST00000589064 ATP7AQ04656 1500 aa32.54■■■□□ 2.8
MBD3-205ENST00000589064 ESF1Q9H501 851 aaKnown RBP32.52■■■□□ 2.8
MBD3-205ENST00000589064 CAMSAP2Q08AD1 1489 aa32.52■■■□□ 2.8
MBD3-205ENST00000589064 FER1L4A9Z1Z3 1794 aa32.48■■■□□ 2.79
MBD3-205ENST00000589064 A2MP01023 1474 aa32.47■■■□□ 2.79
MBD3-205ENST00000589064 RTEL1-TNFRSF6BF6WH68 1400 aa32.46■■■□□ 2.79
MBD3-205ENST00000589064 INO80Q9ULG1 1556 aaPredicted RBP32.45■■■□□ 2.79
MBD3-205ENST00000589064 TSPY4P0CV99 314 aa32.44■■■□□ 2.78
MBD3-205ENST00000589064 TSPY10P0CW01 314 aa32.44■■■□□ 2.78
MBD3-205ENST00000589064 CCDC141Q6ZP82 1450 aa32.44■■■□□ 2.78
MBD3-205ENST00000589064 MYOM3Q5VTT5 1437 aa32.43■■■□□ 2.78
MBD3-205ENST00000589064 LMTK3Q96Q04 1460 aa32.42■■■□□ 2.78
MBD3-205ENST00000589064 HSPA2P54652 639 aa32.42■■■□□ 2.78
MBD3-205ENST00000589064 GGT6Q6P531 493 aa32.42■■■□□ 2.78
MBD3-205ENST00000589064 MIA2Q96PC5 1412 aa32.39■■■□□ 2.78
MBD3-205ENST00000589064 DHX29Q7Z478 1369 aaKnown RBP32.37■■■□□ 2.77
MBD3-205ENST00000589064 CNTLNQ9NXG0 1405 aa32.34■■■□□ 2.77
MBD3-205ENST00000589064 PLXNC1O60486 1568 aa32.34■■■□□ 2.77
MBD3-205ENST00000589064 ARHGEF5Q12774 1597 aa32.32■■■□□ 2.76
MBD3-205ENST00000589064 KIF3BO15066 747 aa32.31■■■□□ 2.76
MBD3-205ENST00000589064 ZMYM3Q14202 1370 aa32.3■■■□□ 2.76
MBD3-205ENST00000589064 PPP6R1Q9UPN7 881 aa32.29■■■□□ 2.76
MBD3-205ENST00000589064 ADGBQ8N7X0 1667 aa32.27■■■□□ 2.76
MBD3-205ENST00000589064 UHRF1BP1Q6BDS2 1440 aa32.21■■■□□ 2.75
MBD3-205ENST00000589064 C3P01024 1663 aa32.2■■■□□ 2.75
MBD3-205ENST00000589064 FGD6Q6ZV73 1430 aa32.2■■■□□ 2.74
MBD3-205ENST00000589064 ABCC5O15440 1437 aa32.17■■■□□ 2.74
MBD3-205ENST00000589064 PTPN23Q9H3S7 1636 aa32.14■■■□□ 2.74
MBD3-205ENST00000589064 MAST1Q9Y2H9 1570 aa32.13■■■□□ 2.73
MBD3-205ENST00000589064 WASHC2CQ9Y4E1 1318 aa32.13■■■□□ 2.73
MBD3-205ENST00000589064 PREX1Q8TCU6 1659 aa32.12■■■□□ 2.73
MBD3-205ENST00000589064 NPATQ14207 1427 aa32.12■■■□□ 2.73
MBD3-205ENST00000589064 SETD1BQ9UPS6 1966 aaKnown RBP32.11■■■□□ 2.73
MBD3-205ENST00000589064 TCOF1Q13428 1488 aaKnown RBP32.11■■■□□ 2.73
MBD3-205ENST00000589064 RRP7BPQ9NSQ0 103 aa32.11■■■□□ 2.73
MBD3-205ENST00000589064 CLTCQ00610 1675 aaKnown RBP32.11■■■□□ 2.73
MBD3-205ENST00000589064 FAM50AQ14320 339 aaKnown RBP32.1■■■□□ 2.73
MBD3-205ENST00000589064 CHIC2Q9UKJ5 165 aa32.1■■■□□ 2.73
MBD3-205ENST00000589064 MROH2AA6NES4 1674 aa32.09■■■□□ 2.73
MBD3-205ENST00000589064 PTPRKQ15262 1439 aa32.09■■■□□ 2.73
MBD3-205ENST00000589064 DAPK1P53355 1430 aa32.08■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms