RNA–Protein interactions for RNA: ENST00000589054.5

NEDD4L-225, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3 BASIC

Gene NEDD4L, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-225ENST00000589054 CDK11AQ9UQ88 783 aaPredicted RBP35.04■■■■□ 3.2
NEDD4L-225ENST00000589054 POGZQ7Z3K3 1410 aa35.02■■■■□ 3.2
NEDD4L-225ENST00000589054 EFCAB2Q5VUJ9 269 aa35.01■■■■□ 3.2
NEDD4L-225ENST00000589054 ZFYVE16Q7Z3T8 1539 aa34.99■■■■□ 3.19
NEDD4L-225ENST00000589054 MAGI2Q86UL8 1455 aa34.96■■■■□ 3.19
NEDD4L-225ENST00000589054 CASKIN1Q8WXD9 1431 aa34.95■■■■□ 3.19
NEDD4L-225ENST00000589054 PCF11O94913 1555 aaKnown RBP34.93■■■■□ 3.18
NEDD4L-225ENST00000589054 MYO5CQ9NQX4 1742 aa34.92■■■■□ 3.18
NEDD4L-225ENST00000589054 MLECQ14165 292 aa34.9■■■■□ 3.18
NEDD4L-225ENST00000589054 AFAP1Q8N556 730 aa34.9■■■■□ 3.18
NEDD4L-225ENST00000589054 RIMS1Q86UR5 1692 aaKnown RBP34.88■■■■□ 3.17
NEDD4L-225ENST00000589054 CLIP1P30622 1438 aa34.88■■■■□ 3.17
NEDD4L-225ENST00000589054 ARHGAP5Q13017 1502 aa34.86■■■■□ 3.17
NEDD4L-225ENST00000589054 PLPPR3Q6T4P5 718 aa34.84■■■■□ 3.17
NEDD4L-225ENST00000589054 ATP10AO60312 1499 aa34.84■■■■□ 3.17
NEDD4L-225ENST00000589054 LMTK3Q96Q04 1460 aa34.83■■■■□ 3.17
NEDD4L-225ENST00000589054 CCDC18Q5T9S5 1454 aa34.8■■■■□ 3.16
NEDD4L-225ENST00000589054 ARHGEF12Q9NZN5 1544 aa34.79■■■■□ 3.16
NEDD4L-225ENST00000589054 CDC42BPBQ9Y5S2 1711 aa34.78■■■■□ 3.16
NEDD4L-225ENST00000589054 ZNF518AQ6AHZ1 1483 aa34.78■■■■□ 3.16
NEDD4L-225ENST00000589054 C9orf84Q5VXU9 1444 aa34.77■■■■□ 3.16
NEDD4L-225ENST00000589054 KDM5CP41229 1560 aa34.76■■■■□ 3.16
NEDD4L-225ENST00000589054 TRAPPC8Q9Y2L5 1435 aa34.75■■■■□ 3.15
NEDD4L-225ENST00000589054 FYCO1Q9BQS8 1478 aa34.75■■■■□ 3.15
NEDD4L-225ENST00000589054 HSPA2P54652 639 aa34.72■■■■□ 3.15
NEDD4L-225ENST00000589054 PREX2Q70Z35 1606 aa34.7■■■■□ 3.14
NEDD4L-225ENST00000589054 ABCC1P33527 1531 aa34.66■■■■□ 3.14
NEDD4L-225ENST00000589054 CEBPAP49715 358 aaPredicted RBP34.66■■■■□ 3.14
NEDD4L-225ENST00000589054 DIP2CQ9Y2E4 1556 aa34.66■■■■□ 3.14
NEDD4L-225ENST00000589054 MLH3Q9UHC1 1453 aa34.65■■■■□ 3.14
NEDD4L-225ENST00000589054 MYT1LQ9UL68 1186 aa34.64■■■■□ 3.14
NEDD4L-225ENST00000589054 FER1L4A9Z1Z3 1794 aa34.63■■■■□ 3.13
NEDD4L-225ENST00000589054 CDC42BPAQ5VT25 1732 aa34.61■■■■□ 3.13
NEDD4L-225ENST00000589054 GPATCH8Q9UKJ3 1502 aaKnown RBP34.6■■■■□ 3.13
NEDD4L-225ENST00000589054 ABCA6Q8N139 1617 aa34.6■■■■□ 3.13
NEDD4L-225ENST00000589054 ZNF777Q9ULD5 760 aaPredicted RBP34.59■■■■□ 3.13
NEDD4L-225ENST00000589054 ITSN2Q9NZM3 1697 aa34.57■■■■□ 3.12
NEDD4L-225ENST00000589054 REREQ9P2R6 1566 aa34.53■■■■□ 3.12
NEDD4L-225ENST00000589054 HNRNPMP52272 730 aaKnown RBP eCLIP34.53■■■■□ 3.127e-7■■■■□ 23.1
NEDD4L-225ENST00000589054 SAMD9LQ8IVG5 1584 aa34.53■■■■□ 3.12
NEDD4L-225ENST00000589054 KIDINS220Q9ULH0 1771 aa34.5■■■■□ 3.11
NEDD4L-225ENST00000589054 AGLP35573 1532 aa34.46■■■■□ 3.11
NEDD4L-225ENST00000589054 SYCP2Q9BX26 1530 aa34.46■■■■□ 3.11
NEDD4L-225ENST00000589054 FBXO41Q8TF61 875 aa34.45■■■■□ 3.11
NEDD4L-225ENST00000589054 CEP162Q5TB80 1403 aa34.45■■■■□ 3.11
NEDD4L-225ENST00000589054 CFDP1Q9UEE9 299 aaPredicted RBP34.44■■■■□ 3.1
NEDD4L-225ENST00000589054 MTUS2Q5JR59 1369 aa34.43■■■■□ 3.1
NEDD4L-225ENST00000589054 CCNB3Q8WWL7 1395 aa34.42■■■■□ 3.1
NEDD4L-225ENST00000589054 ZNF644Q9H582 1327 aaPredicted RBP34.41■■■■□ 3.1
NEDD4L-225ENST00000589054 SPAG9O60271 1321 aaKnown RBP34.39■■■■□ 3.1
NEDD4L-225ENST00000589054 KIAA1107Q9UPP5 1409 aa34.38■■■■□ 3.09
NEDD4L-225ENST00000589054 LOC105371045A0A1W2PR82 267 aa34.34■■■■□ 3.09
NEDD4L-225ENST00000589054 PREX1Q8TCU6 1659 aa34.33■■■■□ 3.09
NEDD4L-225ENST00000589054 TIAM1Q13009 1591 aa34.32■■■■□ 3.08
NEDD4L-225ENST00000589054 C3P01024 1663 aa34.31■■■■□ 3.08
NEDD4L-225ENST00000589054 PLEKHH2Q8IVE3 1493 aa34.29■■■■□ 3.08
NEDD4L-225ENST00000589054 ATP7AQ04656 1500 aa34.28■■■■□ 3.08
NEDD4L-225ENST00000589054 EHBP1L1Q8N3D4 1523 aa34.27■■■■□ 3.08
NEDD4L-225ENST00000589054 UHRF1BP1Q6BDS2 1440 aa34.27■■■■□ 3.08
NEDD4L-225ENST00000589054 MBD5Q9P267 1494 aa34.27■■■■□ 3.08
NEDD4L-225ENST00000589054 ESF1Q9H501 851 aaKnown RBP34.26■■■■□ 3.08
NEDD4L-225ENST00000589054 INO80Q9ULG1 1556 aaPredicted RBP34.26■■■■□ 3.07
NEDD4L-225ENST00000589054 A2MP01023 1474 aa34.21■■■■□ 3.07
NEDD4L-225ENST00000589054 STRCQ7RTU9 1775 aa34.21■■■■□ 3.07
NEDD4L-225ENST00000589054 SETD1BQ9UPS6 1966 aaKnown RBP34.21■■■■□ 3.07
NEDD4L-225ENST00000589054 PLXNC1O60486 1568 aa34.2■■■■□ 3.07
NEDD4L-225ENST00000589054 SUPT6HQ7KZ85 1726 aaKnown RBP34.2■■■■□ 3.07
NEDD4L-225ENST00000589054 CNTLNQ9NXG0 1405 aa34.2■■■■□ 3.06
NEDD4L-225ENST00000589054 CERKQ8TCT0 537 aa34.19■■■■□ 3.06
NEDD4L-225ENST00000589054 ZMYM3Q14202 1370 aa34.19■■■■□ 3.06
NEDD4L-225ENST00000589054 NCOA2Q15596 1464 aa34.16■■■■□ 3.06
NEDD4L-225ENST00000589054 GGT6Q6P531 493 aa34.14■■■■□ 3.06
NEDD4L-225ENST00000589054 RTEL1-TNFRSF6BF6WH68 1400 aa34.07■■■■□ 3.04
NEDD4L-225ENST00000589054 MROH2AA6NES4 1674 aa34.06■■■■□ 3.04
NEDD4L-225ENST00000589054 NPATQ14207 1427 aa34.06■■■■□ 3.04
NEDD4L-225ENST00000589054 DMRT2Q9Y5R5 561 aa34.06■■■■□ 3.04
NEDD4L-225ENST00000589054 VPS8Q8N3P4 1428 aa34.05■■■■□ 3.04
NEDD4L-225ENST00000589054 CLTCQ00610 1675 aaKnown RBP34.04■■■■□ 3.04
NEDD4L-225ENST00000589054 CAMSAP2Q08AD1 1489 aa34.04■■■■□ 3.04
NEDD4L-225ENST00000589054 DHX29Q7Z478 1369 aaKnown RBP34.03■■■■□ 3.04
NEDD4L-225ENST00000589054 KANK4Q5T7N3 995 aaPredicted RBP34.03■■■■□ 3.04
NEDD4L-225ENST00000589054 PTPRKQ15262 1439 aa34.03■■■■□ 3.04
NEDD4L-225ENST00000589054 NCOA1Q15788 1441 aa34.02■■■■□ 3.04
NEDD4L-225ENST00000589054 PTPRTO14522 1441 aa34.01■■■■□ 3.03
NEDD4L-225ENST00000589054 ADGBQ8N7X0 1667 aa34■■■■□ 3.03
NEDD4L-225ENST00000589054 LRRC9Q6ZRR7 1453 aa34■■■■□ 3.03
NEDD4L-225ENST00000589054 CCDC141Q6ZP82 1450 aa33.99■■■■□ 3.03
NEDD4L-225ENST00000589054 PPP6R1Q9UPN7 881 aa33.96■■■■□ 3.03
NEDD4L-225ENST00000589054 KIF3BO15066 747 aa33.94■■■■□ 3.02
NEDD4L-225ENST00000589054 CAMSAP1Q5T5Y3 1602 aa33.93■■■■□ 3.02
NEDD4L-225ENST00000589054 NCKAP5LQ9HCH0 1330 aa33.93■■■■□ 3.02
NEDD4L-225ENST00000589054 RSPH4AQ5TD94 716 aa33.92■■■■□ 3.02
NEDD4L-225ENST00000589054 FBXO31Q5XUX0 539 aaPredicted RBP33.88■■■■□ 3.01
NEDD4L-225ENST00000589054 LTBP4Q8N2S1 1624 aa33.87■■■■□ 3.01
NEDD4L-225ENST00000589054 ARHGEF5Q12774 1597 aa33.87■■■■□ 3.01
NEDD4L-225ENST00000589054 MYO3AQ8NEV4 1616 aa33.86■■■■□ 3.01
NEDD4L-225ENST00000589054 MAP3K1Q13233 1512 aa33.83■■■■□ 3.01
NEDD4L-225ENST00000589054 CEP170BQ9Y4F5 1589 aaPredicted RBP33.82■■■■□ 3
NEDD4L-225ENST00000589054 TSPY4P0CV99 314 aa33.82■■■■□ 3
NEDD4L-225ENST00000589054 TSPY10P0CW01 314 aa33.82■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms