RNA–Protein interactions for RNA: ENST00000588905.5

GCDH-208, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-208ENST00000588905 CEP162Q5TB80 1403 aa24.84■■□□□ 1.57
GCDH-208ENST00000588905 PCF11O94913 1555 aaKnown RBP24.84■■□□□ 1.57
GCDH-208ENST00000588905 CCDC18Q5T9S5 1454 aa24.83■■□□□ 1.56
GCDH-208ENST00000588905 FYCO1Q9BQS8 1478 aa24.83■■□□□ 1.56
GCDH-208ENST00000588905 RIMS1Q86UR5 1692 aaKnown RBP24.81■■□□□ 1.56
GCDH-208ENST00000588905 YEATS2Q9ULM3 1422 aa24.79■■□□□ 1.56
GCDH-208ENST00000588905 PLCH2O75038 1416 aa24.78■■□□□ 1.56
GCDH-208ENST00000588905 ZFYVE16Q7Z3T8 1539 aa24.78■■□□□ 1.56
GCDH-208ENST00000588905 POGZQ7Z3K3 1410 aa24.75■■□□□ 1.55
GCDH-208ENST00000588905 EFCAB2Q5VUJ9 269 aa24.74■■□□□ 1.55
GCDH-208ENST00000588905 CDC42BPBQ9Y5S2 1711 aa24.73■■□□□ 1.55
GCDH-208ENST00000588905 ILDR1Q86SU0 546 aaPredicted RBP24.71■■□□□ 1.55
GCDH-208ENST00000588905 SCAPERQ9BY12 1400 aa24.7■■□□□ 1.55
GCDH-208ENST00000588905 MAGI2Q86UL8 1455 aa24.7■■□□□ 1.54
GCDH-208ENST00000588905 FER1L4A9Z1Z3 1794 aa24.69■■□□□ 1.54
GCDH-208ENST00000588905 LMTK3Q96Q04 1460 aa24.67■■□□□ 1.54
GCDH-208ENST00000588905 PREX2Q70Z35 1606 aa24.66■■□□□ 1.54
GCDH-208ENST00000588905 KDM5CP41229 1560 aa24.66■■□□□ 1.54
GCDH-208ENST00000588905 ARID4BQ4LE39 1312 aaPredicted RBP24.65■■□□□ 1.54
GCDH-208ENST00000588905 CDC42BPAQ5VT25 1732 aa24.64■■□□□ 1.53
GCDH-208ENST00000588905 ARHGAP5Q13017 1502 aa24.62■■□□□ 1.53
GCDH-208ENST00000588905 MTUS2Q5JR59 1369 aa24.6■■□□□ 1.53
GCDH-208ENST00000588905 ARHGEF12Q9NZN5 1544 aa24.6■■□□□ 1.53
GCDH-208ENST00000588905 ITSN2Q9NZM3 1697 aa24.59■■□□□ 1.53
GCDH-208ENST00000588905 DIP2CQ9Y2E4 1556 aa24.59■■□□□ 1.53
GCDH-208ENST00000588905 ABCA6Q8N139 1617 aa24.58■■□□□ 1.53
GCDH-208ENST00000588905 ABCC1P33527 1531 aa24.57■■□□□ 1.52
GCDH-208ENST00000588905 ATP10AO60312 1499 aa24.57■■□□□ 1.52
GCDH-208ENST00000588905 ZNF518AQ6AHZ1 1483 aa24.57■■□□□ 1.52
GCDH-208ENST00000588905 C9orf84Q5VXU9 1444 aa24.56■■□□□ 1.52
GCDH-208ENST00000588905 VPS8Q8N3P4 1428 aa24.53■■□□□ 1.52
GCDH-208ENST00000588905 REREQ9P2R6 1566 aa24.51■■□□□ 1.51
GCDH-208ENST00000588905 AFAP1Q8N556 730 aa24.51■■□□□ 1.51
GCDH-208ENST00000588905 GPATCH8Q9UKJ3 1502 aaKnown RBP24.51■■□□□ 1.51
GCDH-208ENST00000588905 KIDINS220Q9ULH0 1771 aa24.5■■□□□ 1.51
GCDH-208ENST00000588905 CCNB3Q8WWL7 1395 aa24.5■■□□□ 1.51
GCDH-208ENST00000588905 CFDP1Q9UEE9 299 aaPredicted RBP24.48■■□□□ 1.51
GCDH-208ENST00000588905 ZNF777Q9ULD5 760 aaPredicted RBP24.48■■□□□ 1.51
GCDH-208ENST00000588905 TRAPPC8Q9Y2L5 1435 aa24.48■■□□□ 1.51
GCDH-208ENST00000588905 SAMD9LQ8IVG5 1584 aa24.47■■□□□ 1.51
GCDH-208ENST00000588905 MLECQ14165 292 aa24.47■■□□□ 1.51
GCDH-208ENST00000588905 EHBP1L1Q8N3D4 1523 aa24.46■■□□□ 1.51
GCDH-208ENST00000588905 MLH3Q9UHC1 1453 aa24.46■■□□□ 1.51
GCDH-208ENST00000588905 PREX1Q8TCU6 1659 aa24.46■■□□□ 1.51
GCDH-208ENST00000588905 MYT1LQ9UL68 1186 aa24.43■■□□□ 1.5
GCDH-208ENST00000588905 C3P01024 1663 aa24.41■■□□□ 1.5
GCDH-208ENST00000588905 HSPA2P54652 639 aa24.41■■□□□ 1.5
GCDH-208ENST00000588905 PLPPR3Q6T4P5 718 aa24.41■■□□□ 1.5
GCDH-208ENST00000588905 TIAM1Q13009 1591 aa24.4■■□□□ 1.5
GCDH-208ENST00000588905 AGLP35573 1532 aa24.4■■□□□ 1.5
GCDH-208ENST00000588905 HNRNPMP52272 730 aaKnown RBP eCLIP24.39■■□□□ 1.49
GCDH-208ENST00000588905 SYCP2Q9BX26 1530 aa24.39■■□□□ 1.49
GCDH-208ENST00000588905 KIAA1107Q9UPP5 1409 aa24.37■■□□□ 1.49
GCDH-208ENST00000588905 PLEKHH2Q8IVE3 1493 aa24.37■■□□□ 1.49
GCDH-208ENST00000588905 MAP3K1Q13233 1512 aa24.35■■□□□ 1.49
GCDH-208ENST00000588905 STRCQ7RTU9 1775 aa24.35■■□□□ 1.49
GCDH-208ENST00000588905 NCOA2Q15596 1464 aa24.35■■□□□ 1.49
GCDH-208ENST00000588905 LRRC9Q6ZRR7 1453 aa24.35■■□□□ 1.49
GCDH-208ENST00000588905 KANK4Q5T7N3 995 aaPredicted RBP24.35■■□□□ 1.49
GCDH-208ENST00000588905 INO80Q9ULG1 1556 aaPredicted RBP24.33■■□□□ 1.49
GCDH-208ENST00000588905 CEBPAP49715 358 aaPredicted RBP24.33■■□□□ 1.49
GCDH-208ENST00000588905 ZNF644Q9H582 1327 aaPredicted RBP24.33■■□□□ 1.48
GCDH-208ENST00000588905 SETD1BQ9UPS6 1966 aaKnown RBP24.33■■□□□ 1.48
GCDH-208ENST00000588905 APLP2Q06481 763 aa24.32■■□□□ 1.48
GCDH-208ENST00000588905 SPAG9O60271 1321 aaKnown RBP24.32■■□□□ 1.48
GCDH-208ENST00000588905 SUPT6HQ7KZ85 1726 aaKnown RBP24.3■■□□□ 1.48
GCDH-208ENST00000588905 FBXO41Q8TF61 875 aa24.28■■□□□ 1.48
GCDH-208ENST00000588905 PLXNC1O60486 1568 aa24.28■■□□□ 1.48
GCDH-208ENST00000588905 ATP7AQ04656 1500 aa24.27■■□□□ 1.48
GCDH-208ENST00000588905 MROH2AA6NES4 1674 aa24.26■■□□□ 1.47
GCDH-208ENST00000588905 MBD5Q9P267 1494 aa24.24■■□□□ 1.47
GCDH-208ENST00000588905 RSPH4AQ5TD94 716 aa24.21■■□□□ 1.47
GCDH-208ENST00000588905 UHRF1BP1Q6BDS2 1440 aa24.19■■□□□ 1.46
GCDH-208ENST00000588905 CLTCQ00610 1675 aaKnown RBP24.19■■□□□ 1.46
GCDH-208ENST00000588905 ADGBQ8N7X0 1667 aa24.19■■□□□ 1.46
GCDH-208ENST00000588905 CAMSAP2Q08AD1 1489 aa24.18■■□□□ 1.46
GCDH-208ENST00000588905 RTEL1-TNFRSF6BF6WH68 1400 aa24.15■■□□□ 1.46
GCDH-208ENST00000588905 MYOM3Q5VTT5 1437 aa24.14■■□□□ 1.45
GCDH-208ENST00000588905 CNTLNQ9NXG0 1405 aa24.14■■□□□ 1.45
GCDH-208ENST00000588905 A2MP01023 1474 aa24.13■■□□□ 1.45
GCDH-208ENST00000588905 CCDC141Q6ZP82 1450 aa24.13■■□□□ 1.45
GCDH-208ENST00000588905 MIA2Q96PC5 1412 aa24.13■■□□□ 1.45
GCDH-208ENST00000588905 TSPY4P0CV99 314 aa24.11■■□□□ 1.45
GCDH-208ENST00000588905 TSPY10P0CW01 314 aa24.11■■□□□ 1.45
GCDH-208ENST00000588905 ESF1Q9H501 851 aaKnown RBP24.11■■□□□ 1.45
GCDH-208ENST00000588905 ZNF142P52746 1687 aaPredicted RBP24.11■■□□□ 1.45
GCDH-208ENST00000588905 MYO3AQ8NEV4 1616 aa24.1■■□□□ 1.45
GCDH-208ENST00000588905 NPATQ14207 1427 aa24.07■■□□□ 1.44
GCDH-208ENST00000588905 ARHGEF5Q12774 1597 aa24.07■■□□□ 1.44
GCDH-208ENST00000588905 CERKQ8TCT0 537 aa24.06■■□□□ 1.44
GCDH-208ENST00000588905 DHX29Q7Z478 1369 aaKnown RBP24.05■■□□□ 1.44
GCDH-208ENST00000588905 NCOA1Q15788 1441 aa24.05■■□□□ 1.44
GCDH-208ENST00000588905 ZMYM3Q14202 1370 aa24.03■■□□□ 1.44
GCDH-208ENST00000588905 CAMSAP1Q5T5Y3 1602 aa24.02■■□□□ 1.44
GCDH-208ENST00000588905 PTPRTO14522 1441 aa24.02■■□□□ 1.44
GCDH-208ENST00000588905 GGT6Q6P531 493 aa24.02■■□□□ 1.44
GCDH-208ENST00000588905 LTBP4Q8N2S1 1624 aa24.01■■□□□ 1.43
GCDH-208ENST00000588905 PTPRKQ15262 1439 aa24.01■■□□□ 1.43
GCDH-208ENST00000588905 PPP6R1Q9UPN7 881 aa24■■□□□ 1.43
GCDH-208ENST00000588905 CEP170BQ9Y4F5 1589 aaPredicted RBP23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms