RNA–Protein interactions for RNA: ENST00000588738.5

ERCC1-207, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-207ENST00000588738 CDC42BPAQ5VT25 1732 aa29.71■■■□□ 2.35
ERCC1-207ENST00000588738 ADGRL1O94910 1474 aa29.7■■■□□ 2.35
ERCC1-207ENST00000588738 RICTORQ6R327 1708 aa29.68■■■□□ 2.34
ERCC1-207ENST00000588738 SCAPERQ9BY12 1400 aa29.67■■■□□ 2.34
ERCC1-207ENST00000588738 FRMPD1Q5SYB0 1578 aa29.67■■■□□ 2.34
ERCC1-207ENST00000588738 MAP3K1Q13233 1512 aa29.64■■■□□ 2.34
ERCC1-207ENST00000588738 CCNB3Q8WWL7 1395 aa29.64■■■□□ 2.33
ERCC1-207ENST00000588738 GPATCH8Q9UKJ3 1502 aaKnown RBP29.62■■■□□ 2.33
ERCC1-207ENST00000588738 APLP2Q06481 763 aa29.61■■■□□ 2.33
ERCC1-207ENST00000588738 SUPT6HQ7KZ85 1726 aaKnown RBP29.6■■■□□ 2.33
ERCC1-207ENST00000588738 LRRC9Q6ZRR7 1453 aa29.59■■■□□ 2.33
ERCC1-207ENST00000588738 POGZQ7Z3K3 1410 aa29.58■■■□□ 2.33
ERCC1-207ENST00000588738 CFDP1Q9UEE9 299 aaPredicted RBP29.56■■■□□ 2.32
ERCC1-207ENST00000588738 ZMYM4Q5VZL5 1548 aa29.55■■■□□ 2.32
ERCC1-207ENST00000588738 ZNF777Q9ULD5 760 aaPredicted RBP29.55■■■□□ 2.32
ERCC1-207ENST00000588738 ITSN2Q9NZM3 1697 aa29.54■■■□□ 2.32
ERCC1-207ENST00000588738 NCOA2Q15596 1464 aa29.54■■■□□ 2.32
ERCC1-207ENST00000588738 ABCC1P33527 1531 aa29.53■■■□□ 2.32
ERCC1-207ENST00000588738 ZNF518AQ6AHZ1 1483 aa29.53■■■□□ 2.32
ERCC1-207ENST00000588738 MAGI2Q86UL8 1455 aa29.51■■■□□ 2.31
ERCC1-207ENST00000588738 KANK4Q5T7N3 995 aaPredicted RBP29.51■■■□□ 2.31
ERCC1-207ENST00000588738 AEBP2Q6ZN18 517 aaPredicted RBP29.5■■■□□ 2.31
ERCC1-207ENST00000588738 SAMD9LQ8IVG5 1584 aa29.5■■■□□ 2.31
ERCC1-207ENST00000588738 AFAP1Q8N556 730 aa29.49■■■□□ 2.31
ERCC1-207ENST00000588738 ARHGEF40Q8TER5 1519 aa29.48■■■□□ 2.31
ERCC1-207ENST00000588738 ZFYVE16Q7Z3T8 1539 aa29.47■■■□□ 2.31
ERCC1-207ENST00000588738 ARHGEF12Q9NZN5 1544 aa29.47■■■□□ 2.31
ERCC1-207ENST00000588738 KDM4FA0A1W2PPD8 638 aa29.47■■■□□ 2.31
ERCC1-207ENST00000588738 PLEKHH2Q8IVE3 1493 aa29.46■■■□□ 2.31
ERCC1-207ENST00000588738 KDM5CP41229 1560 aa29.45■■■□□ 2.31
ERCC1-207ENST00000588738 TRAPPC8Q9Y2L5 1435 aa29.44■■■□□ 2.3
ERCC1-207ENST00000588738 KIAA1107Q9UPP5 1409 aa29.43■■■□□ 2.3
ERCC1-207ENST00000588738 SYCP2Q9BX26 1530 aa29.42■■■□□ 2.3
ERCC1-207ENST00000588738 YEATS2Q9ULM3 1422 aa29.42■■■□□ 2.3
ERCC1-207ENST00000588738 HNRNPMP52272 730 aaKnown RBP eCLIP29.41■■■□□ 2.3
ERCC1-207ENST00000588738 MYT1LQ9UL68 1186 aa29.41■■■□□ 2.3
ERCC1-207ENST00000588738 HECW2Q9P2P5 1572 aa29.39■■■□□ 2.3
ERCC1-207ENST00000588738 ZNF644Q9H582 1327 aaPredicted RBP29.38■■■□□ 2.29
ERCC1-207ENST00000588738 ARID4BQ4LE39 1312 aaPredicted RBP29.37■■■□□ 2.29
ERCC1-207ENST00000588738 MLH3Q9UHC1 1453 aa29.36■■■□□ 2.29
ERCC1-207ENST00000588738 ATP10AO60312 1499 aa29.35■■■□□ 2.29
ERCC1-207ENST00000588738 MYOM3Q5VTT5 1437 aa29.3■■■□□ 2.28
ERCC1-207ENST00000588738 CAMSAP2Q08AD1 1489 aa29.29■■■□□ 2.28
ERCC1-207ENST00000588738 C9orf84Q5VXU9 1444 aa29.29■■■□□ 2.28
ERCC1-207ENST00000588738 KIDINS220Q9ULH0 1771 aa29.29■■■□□ 2.28
ERCC1-207ENST00000588738 SPAG9O60271 1321 aaKnown RBP29.29■■■□□ 2.28
ERCC1-207ENST00000588738 MBD5Q9P267 1494 aa29.28■■■□□ 2.28
ERCC1-207ENST00000588738 BCORL1Q5H9F3 1711 aa29.28■■■□□ 2.28
ERCC1-207ENST00000588738 DIP2CQ9Y2E4 1556 aa29.27■■■□□ 2.28
ERCC1-207ENST00000588738 MIA2Q96PC5 1412 aa29.27■■■□□ 2.28
ERCC1-207ENST00000588738 ABCA6Q8N139 1617 aa29.27■■■□□ 2.28
ERCC1-207ENST00000588738 SIGLEC1Q9BZZ2 1709 aa29.25■■■□□ 2.27
ERCC1-207ENST00000588738 RSPH4AQ5TD94 716 aa29.25■■■□□ 2.27
ERCC1-207ENST00000588738 ADAMTSL3P82987 1691 aa29.23■■■□□ 2.27
ERCC1-207ENST00000588738 ATP7AQ04656 1500 aa29.22■■■□□ 2.27
ERCC1-207ENST00000588738 REREQ9P2R6 1566 aa29.22■■■□□ 2.27
ERCC1-207ENST00000588738 INO80Q9ULG1 1556 aaPredicted RBP29.21■■■□□ 2.27
ERCC1-207ENST00000588738 CCDC141Q6ZP82 1450 aa29.2■■■□□ 2.26
ERCC1-207ENST00000588738 ARHGEF5Q12774 1597 aa29.18■■■□□ 2.26
ERCC1-207ENST00000588738 MLECQ14165 292 aa29.16■■■□□ 2.26
ERCC1-207ENST00000588738 RTEL1-TNFRSF6BF6WH68 1400 aa29.16■■■□□ 2.26
ERCC1-207ENST00000588738 TSPY4P0CV99 314 aa29.14■■■□□ 2.26
ERCC1-207ENST00000588738 TSPY10P0CW01 314 aa29.14■■■□□ 2.26
ERCC1-207ENST00000588738 MADDQ8WXG6 1647 aa29.13■■■□□ 2.25
ERCC1-207ENST00000588738 PTPN23Q9H3S7 1636 aa29.13■■■□□ 2.25
ERCC1-207ENST00000588738 FGD6Q6ZV73 1430 aa29.12■■■□□ 2.25
ERCC1-207ENST00000588738 AGLP35573 1532 aa29.12■■■□□ 2.25
ERCC1-207ENST00000588738 ADGBQ8N7X0 1667 aa29.11■■■□□ 2.25
ERCC1-207ENST00000588738 A2MP01023 1474 aa29.08■■■□□ 2.25
ERCC1-207ENST00000588738 FER1L4A9Z1Z3 1794 aa29.07■■■□□ 2.24
ERCC1-207ENST00000588738 PTPRMP28827 1452 aa29.07■■■□□ 2.24
ERCC1-207ENST00000588738 RIMS1Q86UR5 1692 aaKnown RBP29.07■■■□□ 2.24
ERCC1-207ENST00000588738 TCOF1Q13428 1488 aaKnown RBP29.05■■■□□ 2.24
ERCC1-207ENST00000588738 PPARGC1BQ86YN6 1023 aaKnown RBP29.03■■■□□ 2.24
ERCC1-207ENST00000588738 PLXNC1O60486 1568 aa29.03■■■□□ 2.24
ERCC1-207ENST00000588738 MAST1Q9Y2H9 1570 aa29.02■■■□□ 2.24
ERCC1-207ENST00000588738 DHX29Q7Z478 1369 aaKnown RBP28.99■■■□□ 2.23
ERCC1-207ENST00000588738 DNMT1P26358 1616 aaKnown RBP28.98■■■□□ 2.23
ERCC1-207ENST00000588738 CROCC2H7BZ55 1655 aa28.97■■■□□ 2.23
ERCC1-207ENST00000588738 ESF1Q9H501 851 aaKnown RBP28.97■■■□□ 2.23
ERCC1-207ENST00000588738 ABCC5O15440 1437 aa28.96■■■□□ 2.23
ERCC1-207ENST00000588738 FAM50AQ14320 339 aaKnown RBP28.96■■■□□ 2.23
ERCC1-207ENST00000588738 DAPK1P53355 1430 aa28.95■■■□□ 2.23
ERCC1-207ENST00000588738 SHANK2Q9UPX8 1470 aa28.94■■■□□ 2.22
ERCC1-207ENST00000588738 GGT6Q6P531 493 aa28.9■■■□□ 2.22
ERCC1-207ENST00000588738 PLPPR3Q6T4P5 718 aa28.9■■■□□ 2.22
ERCC1-207ENST00000588738 KIF3BO15066 747 aa28.88■■■□□ 2.21
ERCC1-207ENST00000588738 CNTLNQ9NXG0 1405 aa28.87■■■□□ 2.21
ERCC1-207ENST00000588738 PPP6R1Q9UPN7 881 aa28.86■■■□□ 2.21
ERCC1-207ENST00000588738 CHIC2Q9UKJ5 165 aa28.84■■■□□ 2.21
ERCC1-207ENST00000588738 DUOX2Q9NRD8 1548 aa28.84■■■□□ 2.21
ERCC1-207ENST00000588738 CEBPAP49715 358 aaPredicted RBP28.82■■■□□ 2.2
ERCC1-207ENST00000588738 RRP7BPQ9NSQ0 103 aa28.82■■■□□ 2.2
ERCC1-207ENST00000588738 ANKRD30AQ9BXX3 1397 aa28.82■■■□□ 2.2
ERCC1-207ENST00000588738 KIF15Q9NS87 1388 aa28.82■■■□□ 2.2
ERCC1-207ENST00000588738 MROH2AA6NES4 1674 aa28.81■■■□□ 2.2
ERCC1-207ENST00000588738 C3P01024 1663 aa28.81■■■□□ 2.2
ERCC1-207ENST00000588738 CLTCQ00610 1675 aaKnown RBP28.8■■■□□ 2.2
ERCC1-207ENST00000588738 EIF2AK4Q9P2K8 1649 aaKnown RBP28.8■■■□□ 2.2
ERCC1-207ENST00000588738 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.78■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms