RNA–Protein interactions for RNA: ENST00000588702.5

PRKAR1A-215, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, human

TSL 2

Gene PRKAR1A, Length 622 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAR1A-215	ENST00000588702	ITSN2	Q9NZM3	1697 aa		29.25	■■■□□ 2.27
PRKAR1A-215	ENST00000588702	CFDP1	Q9UEE9	299 aa	Predicted RBP	29.24	■■■□□ 2.27
PRKAR1A-215	ENST00000588702	PREX2	Q70Z35	1606 aa		29.23	■■■□□ 2.27
PRKAR1A-215	ENST00000588702	FANCA	O15360	1455 aa		29.23	■■■□□ 2.27
PRKAR1A-215	ENST00000588702	ARHGAP5	Q13017	1502 aa		29.23	■■■□□ 2.27
PRKAR1A-215	ENST00000588702	CDC42BPB	Q9Y5S2	1711 aa		29.21	■■■□□ 2.27
PRKAR1A-215	ENST00000588702	AKNA	Q7Z591	1439 aa		29.17	■■■□□ 2.26
PRKAR1A-215	ENST00000588702	MYOM3	Q5VTT5	1437 aa		29.15	■■■□□ 2.26
PRKAR1A-215	ENST00000588702	MIA2	Q96PC5	1412 aa		29.15	■■■□□ 2.26
PRKAR1A-215	ENST00000588702	PPARGC1B	Q86YN6	1023 aa	Known RBP	29.13	■■■□□ 2.25
PRKAR1A-215	ENST00000588702	ZNF777	Q9ULD5	760 aa	Predicted RBP	29.13	■■■□□ 2.25
PRKAR1A-215	ENST00000588702	PLEKHH2	Q8IVE3	1493 aa		29.11	■■■□□ 2.25
PRKAR1A-215	ENST00000588702	ADGRL1	O94910	1474 aa		29.09	■■■□□ 2.25
PRKAR1A-215	ENST00000588702	KDM6B	O15054	1643 aa		29.07	■■■□□ 2.24
PRKAR1A-215	ENST00000588702	KIAA1107	Q9UPP5	1409 aa		29.06	■■■□□ 2.24
PRKAR1A-215	ENST00000588702	SCAPER	Q9BY12	1400 aa		29.05	■■■□□ 2.24
PRKAR1A-215	ENST00000588702	RSPH4A	Q5TD94	716 aa		29.05	■■■□□ 2.24
PRKAR1A-215	ENST00000588702	DENND4B	O75064	1496 aa	Predicted RBP	29.04	■■■□□ 2.24
PRKAR1A-215	ENST00000588702	FGD6	Q6ZV73	1430 aa		29.02	■■■□□ 2.24
PRKAR1A-215	ENST00000588702	SAMD9L	Q8IVG5	1584 aa		29.01	■■■□□ 2.24
PRKAR1A-215	ENST00000588702	ABCC1	P33527	1531 aa		28.99	■■■□□ 2.23
PRKAR1A-215	ENST00000588702	ZNF644	Q9H582	1327 aa	Predicted RBP	28.97	■■■□□ 2.23
PRKAR1A-215	ENST00000588702	CAMSAP2	Q08AD1	1489 aa		28.97	■■■□□ 2.23
PRKAR1A-215	ENST00000588702	COL17A1	Q9UMD9	1497 aa	Predicted RBP	28.97	■■■□□ 2.23
PRKAR1A-215	ENST00000588702	PTPN23	Q9H3S7	1636 aa		28.96	■■■□□ 2.23
PRKAR1A-215	ENST00000588702	RAPGEF3	O95398	923 aa		28.96	■■■□□ 2.23
PRKAR1A-215	ENST00000588702	HNRNPM	P52272	730 aa	Known RBP eCLIP	28.96	■■■□□ 2.23	2e-6	■■□□□ 11.9
PRKAR1A-215	ENST00000588702	ZNF518A	Q6AHZ1	1483 aa		28.96	■■■□□ 2.23
PRKAR1A-215	ENST00000588702	POGZ	Q7Z3K3	1410 aa		28.94	■■■□□ 2.22
PRKAR1A-215	ENST00000588702	TCOF1	Q13428	1488 aa	Known RBP	28.92	■■■□□ 2.22
PRKAR1A-215	ENST00000588702	SYCP2	Q9BX26	1530 aa		28.92	■■■□□ 2.22
PRKAR1A-215	ENST00000588702	RICTOR	Q6R327	1708 aa		28.91	■■■□□ 2.22
PRKAR1A-215	ENST00000588702	ARHGEF12	Q9NZN5	1544 aa		28.91	■■■□□ 2.22
PRKAR1A-215	ENST00000588702	AFAP1	Q8N556	730 aa		28.9	■■■□□ 2.22
PRKAR1A-215	ENST00000588702	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	28.89	■■■□□ 2.22
PRKAR1A-215	ENST00000588702	TSPY4	P0CV99	314 aa		28.89	■■■□□ 2.22
PRKAR1A-215	ENST00000588702	TSPY10	P0CW01	314 aa		28.89	■■■□□ 2.22
PRKAR1A-215	ENST00000588702	FAM50A	Q14320	339 aa	Known RBP	28.89	■■■□□ 2.22
PRKAR1A-215	ENST00000588702	MBD5	Q9P267	1494 aa		28.89	■■■□□ 2.22
PRKAR1A-215	ENST00000588702	ARHGEF5	Q12774	1597 aa		28.88	■■■□□ 2.21
PRKAR1A-215	ENST00000588702	MAGI2	Q86UL8	1455 aa		28.87	■■■□□ 2.21
PRKAR1A-215	ENST00000588702	TRAPPC8	Q9Y2L5	1435 aa		28.86	■■■□□ 2.21
PRKAR1A-215	ENST00000588702	CCDC141	Q6ZP82	1450 aa		28.85	■■■□□ 2.21
PRKAR1A-215	ENST00000588702	RRBP1	Q9P2E9	1410 aa	Known RBP	28.85	■■■□□ 2.21
PRKAR1A-215	ENST00000588702	MYT1L	Q9UL68	1186 aa		28.84	■■■□□ 2.21
PRKAR1A-215	ENST00000588702	ZMYM4	Q5VZL5	1548 aa		28.84	■■■□□ 2.21
PRKAR1A-215	ENST00000588702	KDM5C	P41229	1560 aa		28.84	■■■□□ 2.21
PRKAR1A-215	ENST00000588702	SPAG9	O60271	1321 aa	Known RBP	28.83	■■■□□ 2.21
PRKAR1A-215	ENST00000588702	FRMPD1	Q5SYB0	1578 aa		28.83	■■■□□ 2.21
PRKAR1A-215	ENST00000588702	MLH3	Q9UHC1	1453 aa		28.81	■■■□□ 2.2
PRKAR1A-215	ENST00000588702	RTEL1-TNFRSF6B	F6WH68	1400 aa		28.78	■■■□□ 2.2
PRKAR1A-215	ENST00000588702	DNMT1	P26358	1616 aa	Known RBP	28.76	■■■□□ 2.2
PRKAR1A-215	ENST00000588702	HECW2	Q9P2P5	1572 aa		28.76	■■■□□ 2.19
PRKAR1A-215	ENST00000588702	DAPK1	P53355	1430 aa		28.75	■■■□□ 2.19
PRKAR1A-215	ENST00000588702	ABCC5	O15440	1437 aa		28.74	■■■□□ 2.19
PRKAR1A-215	ENST00000588702	ZFYVE16	Q7Z3T8	1539 aa		28.74	■■■□□ 2.19
PRKAR1A-215	ENST00000588702	SHANK2	Q9UPX8	1470 aa		28.72	■■■□□ 2.19
PRKAR1A-215	ENST00000588702	MAST1	Q9Y2H9	1570 aa		28.71	■■■□□ 2.19
PRKAR1A-215	ENST00000588702	ATP7A	Q04656	1500 aa		28.7	■■■□□ 2.19
PRKAR1A-215	ENST00000588702	KIDINS220	Q9ULH0	1771 aa		28.7	■■■□□ 2.18
PRKAR1A-215	ENST00000588702	C9orf84	Q5VXU9	1444 aa		28.69	■■■□□ 2.18
PRKAR1A-215	ENST00000588702	INO80	Q9ULG1	1556 aa	Predicted RBP	28.68	■■■□□ 2.18
PRKAR1A-215	ENST00000588702	CROCC2	H7BZ55	1655 aa		28.67	■■■□□ 2.18
PRKAR1A-215	ENST00000588702	ATP10A	O60312	1499 aa		28.67	■■■□□ 2.18
PRKAR1A-215	ENST00000588702	ARHGEF40	Q8TER5	1519 aa		28.65	■■■□□ 2.18
PRKAR1A-215	ENST00000588702	YEATS2	Q9ULM3	1422 aa		28.64	■■■□□ 2.18
PRKAR1A-215	ENST00000588702	ANKRD30A	Q9BXX3	1397 aa		28.63	■■■□□ 2.17
PRKAR1A-215	ENST00000588702	ITGAE	P38570	1179 aa		28.63	■■■□□ 2.17
PRKAR1A-215	ENST00000588702	CHIC2	Q9UKJ5	165 aa		28.61	■■■□□ 2.17
PRKAR1A-215	ENST00000588702	ADGB	Q8N7X0	1667 aa		28.61	■■■□□ 2.17
PRKAR1A-215	ENST00000588702	DIP2C	Q9Y2E4	1556 aa		28.59	■■■□□ 2.17
PRKAR1A-215	ENST00000588702	ABCA6	Q8N139	1617 aa		28.58	■■■□□ 2.17
PRKAR1A-215	ENST00000588702	ROCK1	Q13464	1354 aa		28.58	■■■□□ 2.17
PRKAR1A-215	ENST00000588702	PLXNC1	O60486	1568 aa		28.58	■■■□□ 2.17
PRKAR1A-215	ENST00000588702	RERE	Q9P2R6	1566 aa		28.58	■■■□□ 2.17
PRKAR1A-215	ENST00000588702	ADGRL2	O95490	1459 aa		28.57	■■■□□ 2.16
PRKAR1A-215	ENST00000588702	NCOA1	Q15788	1441 aa		28.56	■■■□□ 2.16
PRKAR1A-215	ENST00000588702	A2M	P01023	1474 aa		28.55	■■■□□ 2.16
PRKAR1A-215	ENST00000588702	DHX29	Q7Z478	1369 aa	Known RBP	28.55	■■■□□ 2.16
PRKAR1A-215	ENST00000588702	RRP7BP	Q9NSQ0	103 aa		28.54	■■■□□ 2.16
PRKAR1A-215	ENST00000588702	PTPRK	Q15262	1439 aa		28.53	■■■□□ 2.16
PRKAR1A-215	ENST00000588702	ARID4B	Q4LE39	1312 aa	Predicted RBP	28.53	■■■□□ 2.16
PRKAR1A-215	ENST00000588702	DUOX2	Q9NRD8	1548 aa		28.52	■■■□□ 2.16
PRKAR1A-215	ENST00000588702	KIF15	Q9NS87	1388 aa		28.51	■■■□□ 2.16
PRKAR1A-215	ENST00000588702	AGL	P35573	1532 aa		28.49	■■■□□ 2.15
PRKAR1A-215	ENST00000588702	TRIM26	Q12899	539 aa	Predicted RBP	28.46	■■■□□ 2.15
PRKAR1A-215	ENST00000588702	ERBIN	Q96RT1	1412 aa		28.44	■■■□□ 2.14
PRKAR1A-215	ENST00000588702	KIF3B	O15066	747 aa		28.41	■■■□□ 2.14
PRKAR1A-215	ENST00000588702	PPP6R1	Q9UPN7	881 aa		28.41	■■■□□ 2.14
PRKAR1A-215	ENST00000588702	EIF2AK4	Q9P2K8	1649 aa	Known RBP	28.4	■■■□□ 2.14
PRKAR1A-215	ENST00000588702	ANKRD50	Q9ULJ7	1429 aa		28.4	■■■□□ 2.14
PRKAR1A-215	ENST00000588702	BCORL1	Q5H9F3	1711 aa		28.38	■■■□□ 2.13
PRKAR1A-215	ENST00000588702	ACIN1	Q9UKV3	1341 aa	Known RBP	28.36	■■■□□ 2.13
PRKAR1A-215	ENST00000588702	HFM1	A2PYH4	1435 aa		28.35	■■■□□ 2.13
PRKAR1A-215	ENST00000588702	SIGLEC1	Q9BZZ2	1709 aa		28.35	■■■□□ 2.13
PRKAR1A-215	ENST00000588702	MLEC	Q14165	292 aa		28.34	■■■□□ 2.13
PRKAR1A-215	ENST00000588702	GGT6	Q6P531	493 aa		28.34	■■■□□ 2.13
PRKAR1A-215	ENST00000588702	ESF1	Q9H501	851 aa	Known RBP	28.34	■■■□□ 2.13
PRKAR1A-215	ENST00000588702	NAIP	Q13075	1403 aa		28.33	■■■□□ 2.13
PRKAR1A-215	ENST00000588702	GCC2	Q8IWJ2	1684 aa		28.3	■■■□□ 2.12

Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms