RNA–Protein interactions for RNA: ENST00000588534.1

ZNF554-202, Transcript of zinc finger protein 554, humanhuman

TSL 2

Gene ZNF554, Length 4,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-202ENST00000588534 HDGFP51858 240 aaKnown RBP10.47□□□□□ -0.73
ZNF554-202ENST00000588534 DISP1Q96F81 1524 aa10.47□□□□□ -0.73
ZNF554-202ENST00000588534 POLR3GLQ9BT43 218 aa10.47□□□□□ -0.73
ZNF554-202ENST00000588534 ZNF316A6NFI3 1004 aaPredicted RBP10.46□□□□□ -0.73
ZNF554-202ENST00000588534 NUP155O75694 1391 aa10.46□□□□□ -0.73
ZNF554-202ENST00000588534 CEP170Q5SW79 1584 aa10.46□□□□□ -0.73
ZNF554-202ENST00000588534 CDK13Q14004 1512 aaKnown RBP10.46□□□□□ -0.74
ZNF554-202ENST00000588534 KIF14Q15058 1648 aa10.45□□□□□ -0.74
ZNF554-202ENST00000588534 KIF3BO15066 747 aa10.45□□□□□ -0.74
ZNF554-202ENST00000588534 SAMD9Q5K651 1589 aa10.45□□□□□ -0.74
ZNF554-202ENST00000588534 MPHOSPH9Q99550 1183 aa10.44□□□□□ -0.74
ZNF554-202ENST00000588534 CENPBP07199 599 aaPredicted RBP10.44□□□□□ -0.74
ZNF554-202ENST00000588534 DAXXQ9UER7 740 aaPredicted RBP10.44□□□□□ -0.74
ZNF554-202ENST00000588534 ATP10BO94823 1461 aa10.44□□□□□ -0.74
ZNF554-202ENST00000588534 NUP153P49790 1475 aaKnown RBP10.43□□□□□ -0.74
ZNF554-202ENST00000588534 GGT6Q6P531 493 aa10.43□□□□□ -0.74
ZNF554-202ENST00000588534 PELP1Q8IZL8 1130 aaKnown RBP10.43□□□□□ -0.74
ZNF554-202ENST00000588534 ABCC2Q92887 1545 aa10.43□□□□□ -0.74
ZNF554-202ENST00000588534 PKD2Q13563 968 aa10.42□□□□□ -0.74
ZNF554-202ENST00000588534 CD109Q6YHK3 1445 aa10.42□□□□□ -0.74
ZNF554-202ENST00000588534 KIF15Q9NS87 1388 aa10.42□□□□□ -0.74
ZNF554-202ENST00000588534 ROCK1Q13464 1354 aa10.41□□□□□ -0.74
ZNF554-202ENST00000588534 ZNF644Q9H582 1327 aaPredicted RBP10.4□□□□□ -0.74
ZNF554-202ENST00000588534 UHRF1BP1LA0JNW5 1464 aa10.4□□□□□ -0.74
ZNF554-202ENST00000588534 PPP1R15AO75807 674 aaPredicted RBP10.4□□□□□ -0.74
ZNF554-202ENST00000588534 WASHC2CQ9Y4E1 1318 aa10.39□□□□□ -0.75
ZNF554-202ENST00000588534 ANKRD50Q9ULJ7 1429 aa10.39□□□□□ -0.75
ZNF554-202ENST00000588534 WDR7Q9Y4E6 1490 aa10.39□□□□□ -0.75
ZNF554-202ENST00000588534 EIF4G2P78344 907 aaKnown RBP eCLIP10.38□□□□□ -0.75
ZNF554-202ENST00000588534 DIEXFQ68CQ4 756 aaKnown RBP10.38□□□□□ -0.75
ZNF554-202ENST00000588534 KDM2AQ9Y2K7 1162 aa10.38□□□□□ -0.75
ZNF554-202ENST00000588534 C9orf84Q5VXU9 1444 aa10.38□□□□□ -0.75
ZNF554-202ENST00000588534 ASXL2Q76L83 1435 aa10.38□□□□□ -0.75
ZNF554-202ENST00000588534 SCAPERQ9BY12 1400 aa10.38□□□□□ -0.75
ZNF554-202ENST00000588534 STAC3Q96MF2 364 aa10.38□□□□□ -0.75
ZNF554-202ENST00000588534 CCDC141Q6ZP82 1450 aa10.37□□□□□ -0.75
ZNF554-202ENST00000588534 ARHGEF11O15085 1522 aa10.37□□□□□ -0.75
ZNF554-202ENST00000588534 DAPK1P53355 1430 aa10.37□□□□□ -0.75
ZNF554-202ENST00000588534 PLCH2O75038 1416 aa10.36□□□□□ -0.75
ZNF554-202ENST00000588534 CDCA8Q53HL2 280 aa10.36□□□□□ -0.75
ZNF554-202ENST00000588534 PRKCSHP14314 528 aaPredicted RBP10.36□□□□□ -0.75
ZNF554-202ENST00000588534 HFM1A2PYH4 1435 aa10.36□□□□□ -0.75
ZNF554-202ENST00000588534 TEX14Q8IWB6 1497 aa10.36□□□□□ -0.75
ZNF554-202ENST00000588534 ANP32CO43423 234 aa10.36□□□□□ -0.75
ZNF554-202ENST00000588534 RGL3Q3MIN7 710 aa10.36□□□□□ -0.75
ZNF554-202ENST00000588534 AFAP1Q8N556 730 aa10.36□□□□□ -0.75
ZNF554-202ENST00000588534 MLECQ14165 292 aa10.35□□□□□ -0.75
ZNF554-202ENST00000588534 CHD1O14646 1710 aa10.35□□□□□ -0.75
ZNF554-202ENST00000588534 KIAA1107Q9UPP5 1409 aa10.35□□□□□ -0.75
ZNF554-202ENST00000588534 GPATCH8Q9UKJ3 1502 aaKnown RBP10.34□□□□□ -0.75
ZNF554-202ENST00000588534 CAMSAP2Q08AD1 1489 aa10.34□□□□□ -0.75
ZNF554-202ENST00000588534 ADGRL1O94910 1474 aa10.33□□□□□ -0.76
ZNF554-202ENST00000588534 AKNAQ7Z591 1439 aa10.33□□□□□ -0.76
ZNF554-202ENST00000588534 CFAP43Q8NDM7 1665 aa10.32□□□□□ -0.76
ZNF554-202ENST00000588534 SIN3AQ96ST3 1273 aa10.32□□□□□ -0.76
ZNF554-202ENST00000588534 FANCAO15360 1455 aa10.32□□□□□ -0.76
ZNF554-202ENST00000588534 PTPN23Q9H3S7 1636 aa10.32□□□□□ -0.76
ZNF554-202ENST00000588534 DHX57Q6P158 1386 aaKnown RBP10.32□□□□□ -0.76
ZNF554-202ENST00000588534 ABCA8O94911 1581 aa10.32□□□□□ -0.76
ZNF554-202ENST00000588534 DENND4BO75064 1496 aaPredicted RBP10.32□□□□□ -0.76
ZNF554-202ENST00000588534 PPP6R1Q9UPN7 881 aa10.31□□□□□ -0.76
ZNF554-202ENST00000588534 ITSN2Q9NZM3 1697 aa10.31□□□□□ -0.76
ZNF554-202ENST00000588534 CCDC144AA2RUR9 1427 aa10.31□□□□□ -0.76
ZNF554-202ENST00000588534 POGZQ7Z3K3 1410 aa10.31□□□□□ -0.76
ZNF554-202ENST00000588534 KDM5BQ9UGL1 1544 aa10.3□□□□□ -0.76
ZNF554-202ENST00000588534 DCAF11Q8TEB1 546 aa10.3□□□□□ -0.76
ZNF554-202ENST00000588534 ABCC5O15440 1437 aa10.3□□□□□ -0.76
ZNF554-202ENST00000588534 CARD11Q9BXL7 1154 aa10.3□□□□□ -0.76
ZNF554-202ENST00000588534 MYT1Q01538 1121 aa10.29□□□□□ -0.76
ZNF554-202ENST00000588534 CLASP1Q7Z460 1538 aa10.29□□□□□ -0.76
ZNF554-202ENST00000588534 TCOF1Q13428 1488 aaKnown RBP10.28□□□□□ -0.76
ZNF554-202ENST00000588534 NCOA1Q15788 1441 aa10.27□□□□□ -0.77
ZNF554-202ENST00000588534 EID1Q9Y6B2 187 aa10.26□□□□□ -0.77
ZNF554-202ENST00000588534 NAIPQ13075 1403 aa10.26□□□□□ -0.77
ZNF554-202ENST00000588534 RAPGEF3O95398 923 aa10.26□□□□□ -0.77
ZNF554-202ENST00000588534 VGFO15240 615 aaPredicted RBP10.25□□□□□ -0.77
ZNF554-202ENST00000588534 ZNF518AQ6AHZ1 1483 aa10.25□□□□□ -0.77
ZNF554-202ENST00000588534 RTEL1-TNFRSF6BF6WH68 1400 aa10.25□□□□□ -0.77
ZNF554-202ENST00000588534 SHANK2Q9UPX8 1470 aa10.24□□□□□ -0.77
ZNF554-202ENST00000588534 ABCC10Q5T3U5 1492 aa10.24□□□□□ -0.77
ZNF554-202ENST00000588534 FOXD1Q16676 465 aa10.24□□□□□ -0.77
ZNF554-202ENST00000588534 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.24□□□□□ -0.77
ZNF554-202ENST00000588534 DHX29Q7Z478 1369 aaKnown RBP10.24□□□□□ -0.77
ZNF554-202ENST00000588534 NEO1Q92859 1461 aa10.23□□□□□ -0.77
ZNF554-202ENST00000588534 L3MBTL2Q969R5 705 aa10.23□□□□□ -0.77
ZNF554-202ENST00000588534 SLC52A1Q9NWF4 448 aa10.23□□□□□ -0.77
ZNF554-202ENST00000588534 EIF3AQ14152 1382 aaKnown RBP10.22□□□□□ -0.77
ZNF554-202ENST00000588534 POGKQ9P215 609 aa10.22□□□□□ -0.77
ZNF554-202ENST00000588534 NEFLP07196 543 aa10.22□□□□□ -0.77
ZNF554-202ENST00000588534 TMF1P82094 1093 aa10.22□□□□□ -0.77
ZNF554-202ENST00000588534 ERICH6Q7L0X2 663 aa10.22□□□□□ -0.77
ZNF554-202ENST00000588534 NEFMP07197 916 aa10.2□□□□□ -0.78
ZNF554-202ENST00000588534 ERBINQ96RT1 1412 aa10.2□□□□□ -0.78
ZNF554-202ENST00000588534 SHROOM2Q13796 1616 aa10.2□□□□□ -0.78
ZNF554-202ENST00000588534 DUOX2Q9NRD8 1548 aa10.2□□□□□ -0.78
ZNF554-202ENST00000588534 ROCK2O75116 1388 aaKnown RBP10.19□□□□□ -0.78
ZNF554-202ENST00000588534 DDX10Q13206 875 aaKnown RBP10.19□□□□□ -0.78
ZNF554-202ENST00000588534 CFAP74Q9C0B2 1584 aa10.19□□□□□ -0.78
ZNF554-202ENST00000588534 CNGB1Q14028 1251 aaPredicted RBP10.18□□□□□ -0.78
ZNF554-202ENST00000588534 RPGRIP1LQ68CZ1 1315 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms