RNA–Protein interactions for RNA: ENST00000588269.1

PRKCSH-207, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-207ENST00000588269 AKNAQ7Z591 1439 aa18.82■□□□□ 0.6
PRKCSH-207ENST00000588269 FANCAO15360 1455 aa18.81■□□□□ 0.6
PRKCSH-207ENST00000588269 DENND4BO75064 1496 aaPredicted RBP18.81■□□□□ 0.6
PRKCSH-207ENST00000588269 TROQ12816 1431 aaPredicted RBP18.81■□□□□ 0.6
PRKCSH-207ENST00000588269 YEATS2Q9ULM3 1422 aa18.79■□□□□ 0.6
PRKCSH-207ENST00000588269 LMTK3Q96Q04 1460 aa18.76■□□□□ 0.59
PRKCSH-207ENST00000588269 MLECQ14165 292 aa18.74■□□□□ 0.59
PRKCSH-207ENST00000588269 LRRIQ1Q96JM4 1722 aa18.74■□□□□ 0.59
PRKCSH-207ENST00000588269 MYO5CQ9NQX4 1742 aa18.74■□□□□ 0.59
PRKCSH-207ENST00000588269 HSPA2P54652 639 aa18.73■□□□□ 0.59
PRKCSH-207ENST00000588269 ZFYVE16Q7Z3T8 1539 aa18.73■□□□□ 0.59
PRKCSH-207ENST00000588269 ZMYM4Q5VZL5 1548 aa18.71■□□□□ 0.59
PRKCSH-207ENST00000588269 PLCH2O75038 1416 aa18.71■□□□□ 0.59
PRKCSH-207ENST00000588269 SCAPERQ9BY12 1400 aa18.69■□□□□ 0.58
PRKCSH-207ENST00000588269 FBXO41Q8TF61 875 aa18.68■□□□□ 0.58
PRKCSH-207ENST00000588269 ARHGAP5Q13017 1502 aa18.68■□□□□ 0.58
PRKCSH-207ENST00000588269 POGZQ7Z3K3 1410 aa18.66■□□□□ 0.58
PRKCSH-207ENST00000588269 EFCAB2Q5VUJ9 269 aa18.66■□□□□ 0.58
PRKCSH-207ENST00000588269 MTUS2Q5JR59 1369 aa18.66■□□□□ 0.58
PRKCSH-207ENST00000588269 FER1L4A9Z1Z3 1794 aa18.65■□□□□ 0.58
PRKCSH-207ENST00000588269 EHBP1L1Q8N3D4 1523 aa18.64■□□□□ 0.58
PRKCSH-207ENST00000588269 PREX2Q70Z35 1606 aa18.64■□□□□ 0.57
PRKCSH-207ENST00000588269 VPS8Q8N3P4 1428 aa18.64■□□□□ 0.57
PRKCSH-207ENST00000588269 LOC105371045A0A1W2PR82 267 aa18.61■□□□□ 0.57
PRKCSH-207ENST00000588269 MAGI2Q86UL8 1455 aa18.6■□□□□ 0.57
PRKCSH-207ENST00000588269 CEBPAP49715 358 aaPredicted RBP18.6■□□□□ 0.57
PRKCSH-207ENST00000588269 ZNF518AQ6AHZ1 1483 aa18.59■□□□□ 0.57
PRKCSH-207ENST00000588269 AFAP1Q8N556 730 aa18.58■□□□□ 0.56
PRKCSH-207ENST00000588269 ATP10AO60312 1499 aa18.58■□□□□ 0.56
PRKCSH-207ENST00000588269 C9orf84Q5VXU9 1444 aa18.57■□□□□ 0.56
PRKCSH-207ENST00000588269 ARHGEF12Q9NZN5 1544 aa18.56■□□□□ 0.56
PRKCSH-207ENST00000588269 CCNB3Q8WWL7 1395 aa18.55■□□□□ 0.56
PRKCSH-207ENST00000588269 TIAM1Q13009 1591 aa18.55■□□□□ 0.56
PRKCSH-207ENST00000588269 CDC42BPBQ9Y5S2 1711 aa18.55■□□□□ 0.56
PRKCSH-207ENST00000588269 CDC42BPAQ5VT25 1732 aa18.54■□□□□ 0.56
PRKCSH-207ENST00000588269 ABCC1P33527 1531 aa18.54■□□□□ 0.56
PRKCSH-207ENST00000588269 ITSN2Q9NZM3 1697 aa18.54■□□□□ 0.56
PRKCSH-207ENST00000588269 PLEKHH2Q8IVE3 1493 aa18.53■□□□□ 0.56
PRKCSH-207ENST00000588269 MYT1LQ9UL68 1186 aa18.53■□□□□ 0.56
PRKCSH-207ENST00000588269 SUPT6HQ7KZ85 1726 aaKnown RBP18.52■□□□□ 0.55
PRKCSH-207ENST00000588269 KDM5CP41229 1560 aa18.51■□□□□ 0.55
PRKCSH-207ENST00000588269 DIP2CQ9Y2E4 1556 aa18.51■□□□□ 0.55
PRKCSH-207ENST00000588269 MAP3K1Q13233 1512 aa18.51■□□□□ 0.55
PRKCSH-207ENST00000588269 GPATCH8Q9UKJ3 1502 aaKnown RBP18.5■□□□□ 0.55
PRKCSH-207ENST00000588269 ABCA6Q8N139 1617 aa18.5■□□□□ 0.55
PRKCSH-207ENST00000588269 CFDP1Q9UEE9 299 aaPredicted RBP18.49■□□□□ 0.55
PRKCSH-207ENST00000588269 TRAPPC8Q9Y2L5 1435 aa18.49■□□□□ 0.55
PRKCSH-207ENST00000588269 PREX1Q8TCU6 1659 aa18.48■□□□□ 0.55
PRKCSH-207ENST00000588269 APLP2Q06481 763 aa18.48■□□□□ 0.55
PRKCSH-207ENST00000588269 CERKQ8TCT0 537 aa18.46■□□□□ 0.55
PRKCSH-207ENST00000588269 LRRC9Q6ZRR7 1453 aa18.46■□□□□ 0.54
PRKCSH-207ENST00000588269 SYCP2Q9BX26 1530 aa18.45■□□□□ 0.54
PRKCSH-207ENST00000588269 ZNF777Q9ULD5 760 aaPredicted RBP18.45■□□□□ 0.54
PRKCSH-207ENST00000588269 KIAA1107Q9UPP5 1409 aa18.45■□□□□ 0.54
PRKCSH-207ENST00000588269 SAMD9LQ8IVG5 1584 aa18.45■□□□□ 0.54
PRKCSH-207ENST00000588269 NCOA2Q15596 1464 aa18.45■□□□□ 0.54
PRKCSH-207ENST00000588269 STRCQ7RTU9 1775 aa18.45■□□□□ 0.54
PRKCSH-207ENST00000588269 MLH3Q9UHC1 1453 aa18.44■□□□□ 0.54
PRKCSH-207ENST00000588269 C3P01024 1663 aa18.42■□□□□ 0.54
PRKCSH-207ENST00000588269 KIDINS220Q9ULH0 1771 aa18.41■□□□□ 0.54
PRKCSH-207ENST00000588269 REREQ9P2R6 1566 aa18.4■□□□□ 0.54
PRKCSH-207ENST00000588269 UHRF1BP1Q6BDS2 1440 aa18.39■□□□□ 0.53
PRKCSH-207ENST00000588269 SPAG9O60271 1321 aaKnown RBP18.36■□□□□ 0.53
PRKCSH-207ENST00000588269 ATP7AQ04656 1500 aa18.35■□□□□ 0.53
PRKCSH-207ENST00000588269 CAMSAP2Q08AD1 1489 aa18.35■□□□□ 0.53
PRKCSH-207ENST00000588269 AGLP35573 1532 aa18.34■□□□□ 0.53
PRKCSH-207ENST00000588269 INO80Q9ULG1 1556 aaPredicted RBP18.34■□□□□ 0.53
PRKCSH-207ENST00000588269 SETD1BQ9UPS6 1966 aaKnown RBP18.33■□□□□ 0.53
PRKCSH-207ENST00000588269 HNRNPMP52272 730 aaKnown RBP eCLIP18.33■□□□□ 0.52
PRKCSH-207ENST00000588269 CCDC141Q6ZP82 1450 aa18.33■□□□□ 0.52
PRKCSH-207ENST00000588269 RSPH4AQ5TD94 716 aa18.32■□□□□ 0.52
PRKCSH-207ENST00000588269 MYOM3Q5VTT5 1437 aa18.32■□□□□ 0.52
PRKCSH-207ENST00000588269 MIA2Q96PC5 1412 aa18.32■□□□□ 0.52
PRKCSH-207ENST00000588269 ESF1Q9H501 851 aaKnown RBP18.31■□□□□ 0.52
PRKCSH-207ENST00000588269 ARHGEF5Q12774 1597 aa18.29■□□□□ 0.52
PRKCSH-207ENST00000588269 MBD5Q9P267 1494 aa18.28■□□□□ 0.52
PRKCSH-207ENST00000588269 RTEL1-TNFRSF6BF6WH68 1400 aa18.28■□□□□ 0.52
PRKCSH-207ENST00000588269 KANK4Q5T7N3 995 aaPredicted RBP18.27■□□□□ 0.52
PRKCSH-207ENST00000588269 ADGBQ8N7X0 1667 aa18.26■□□□□ 0.51
PRKCSH-207ENST00000588269 ZNF644Q9H582 1327 aaPredicted RBP18.25■□□□□ 0.51
PRKCSH-207ENST00000588269 CLTCQ00610 1675 aaKnown RBP18.25■□□□□ 0.51
PRKCSH-207ENST00000588269 DMRT2Q9Y5R5 561 aa18.25■□□□□ 0.51
PRKCSH-207ENST00000588269 A2MP01023 1474 aa18.25■□□□□ 0.51
PRKCSH-207ENST00000588269 PLXNC1O60486 1568 aa18.24■□□□□ 0.51
PRKCSH-207ENST00000588269 PTPRTO14522 1441 aa18.23■□□□□ 0.51
PRKCSH-207ENST00000588269 NCOA1Q15788 1441 aa18.23■□□□□ 0.51
PRKCSH-207ENST00000588269 ZMYM3Q14202 1370 aa18.23■□□□□ 0.51
PRKCSH-207ENST00000588269 CAMSAP1Q5T5Y3 1602 aa18.23■□□□□ 0.51
PRKCSH-207ENST00000588269 LTBP4Q8N2S1 1624 aa18.23■□□□□ 0.51
PRKCSH-207ENST00000588269 CNTLNQ9NXG0 1405 aa18.23■□□□□ 0.51
PRKCSH-207ENST00000588269 TSPY4P0CV99 314 aa18.22■□□□□ 0.51
PRKCSH-207ENST00000588269 TSPY10P0CW01 314 aa18.22■□□□□ 0.51
PRKCSH-207ENST00000588269 NCKAP5LQ9HCH0 1330 aa18.22■□□□□ 0.51
PRKCSH-207ENST00000588269 ILDR2Q71H61 639 aa18.21■□□□□ 0.51
PRKCSH-207ENST00000588269 MROH2AA6NES4 1674 aa18.21■□□□□ 0.51
PRKCSH-207ENST00000588269 GGT6Q6P531 493 aa18.2■□□□□ 0.5
PRKCSH-207ENST00000588269 DISP3Q9P2K9 1392 aa18.18■□□□□ 0.5
PRKCSH-207ENST00000588269 MAST1Q9Y2H9 1570 aa18.18■□□□□ 0.5
PRKCSH-207ENST00000588269 FGD6Q6ZV73 1430 aa18.18■□□□□ 0.5
PRKCSH-207ENST00000588269 MYO3AQ8NEV4 1616 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms