RNA–Protein interactions for RNA: ENST00000588012.5

PTPRS-205, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRS, Length 5,993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-205ENST00000588012 TAOK2Q9UL54 1235 aa20.47■□□□□ 0.87
PTPRS-205ENST00000588012 PAK3O75914 559 aaPredicted RBP20.47■□□□□ 0.87
PTPRS-205ENST00000588012 VPS8Q8N3P4 1428 aa20.47■□□□□ 0.87
PTPRS-205ENST00000588012 PPP4R2Q9NY27 417 aa20.46■□□□□ 0.87
PTPRS-205ENST00000588012 GLIPR1L2Q4G1C9 344 aa20.46■□□□□ 0.87
PTPRS-205ENST00000588012 ABCC8Q09428 1581 aa20.46■□□□□ 0.87
PTPRS-205ENST00000588012 PTMAP06454 111 aaKnown RBP20.46■□□□□ 0.87
PTPRS-205ENST00000588012 ANKRD30AQ9BXX3 1397 aa20.45■□□□□ 0.86
PTPRS-205ENST00000588012 NAP1L2Q9ULW6 460 aaPredicted RBP20.43■□□□□ 0.86
PTPRS-205ENST00000588012 CSB-PGBD3P0DP91 1061 aa20.43■□□□□ 0.86
PTPRS-205ENST00000588012 ROCK2O75116 1388 aaKnown RBP20.42■□□□□ 0.86
PTPRS-205ENST00000588012 KTN1Q86UP2 1357 aaKnown RBP20.42■□□□□ 0.86
PTPRS-205ENST00000588012 HSPA5P11021 654 aaKnown RBP20.42■□□□□ 0.86
PTPRS-205ENST00000588012 NUP155O75694 1391 aa20.42■□□□□ 0.86
PTPRS-205ENST00000588012 HSP90AB1P08238 724 aaKnown RBP20.41■□□□□ 0.86
PTPRS-205ENST00000588012 FOXD1Q16676 465 aa20.4■□□□□ 0.86
PTPRS-205ENST00000588012 EIF3AQ14152 1382 aaKnown RBP20.39■□□□□ 0.85
PTPRS-205ENST00000588012 KIF3BO15066 747 aa20.37■□□□□ 0.85
PTPRS-205ENST00000588012 KANK4Q5T7N3 995 aaPredicted RBP20.37■□□□□ 0.85
PTPRS-205ENST00000588012 MPHOSPH9Q99550 1183 aa20.37■□□□□ 0.85
PTPRS-205ENST00000588012 EID1Q9Y6B2 187 aa20.37■□□□□ 0.85
PTPRS-205ENST00000588012 CALD1Q05682 793 aaKnown RBP20.36■□□□□ 0.85
PTPRS-205ENST00000588012 MCCP23508 829 aa20.35■□□□□ 0.85
PTPRS-205ENST00000588012 TOP2AP11388 1531 aaKnown RBP20.33■□□□□ 0.85
PTPRS-205ENST00000588012 IPO8O15397 1037 aaKnown RBP20.32■□□□□ 0.84
PTPRS-205ENST00000588012 HNRNPMP52272 730 aaKnown RBP eCLIP20.32■□□□□ 0.84
PTPRS-205ENST00000588012 CADPSQ9ULU8 1353 aa20.32■□□□□ 0.84
PTPRS-205ENST00000588012 SPAG9O60271 1321 aaKnown RBP20.32■□□□□ 0.84
PTPRS-205ENST00000588012 GOLGA6L6A8MZA4 724 aa20.31■□□□□ 0.84
PTPRS-205ENST00000588012 U2AF1L5P0DN76 240 aaPredicted RBP20.31■□□□□ 0.84
PTPRS-205ENST00000588012 U2AF1Q01081 240 aaKnown RBP eCLIP20.31■□□□□ 0.842e-6■■■■□ 20
PTPRS-205ENST00000588012 CFAP44Q96MT7 982 aa20.31■□□□□ 0.84
PTPRS-205ENST00000588012 CCER2I3L3R5 266 aa20.31■□□□□ 0.84
PTPRS-205ENST00000588012 WASHC2CQ9Y4E1 1318 aa20.3■□□□□ 0.84
PTPRS-205ENST00000588012 RAPGEF2Q9Y4G8 1499 aa20.3■□□□□ 0.84
PTPRS-205ENST00000588012 RSPH4AQ5TD94 716 aa20.3■□□□□ 0.84
PTPRS-205ENST00000588012 DNTTIP2Q5QJE6 756 aaKnown RBP20.29■□□□□ 0.84
PTPRS-205ENST00000588012 CCDC9Q9Y3X0 531 aaKnown RBP20.29■□□□□ 0.84
PTPRS-205ENST00000588012 CCDC18Q5T9S5 1454 aa20.29■□□□□ 0.84
PTPRS-205ENST00000588012 ZNF330Q9Y3S2 320 aaPredicted RBP20.29■□□□□ 0.84
PTPRS-205ENST00000588012 HSCBQ8IWL3 235 aa20.28■□□□□ 0.84
PTPRS-205ENST00000588012 PLCB2Q00722 1185 aa20.27■□□□□ 0.84
PTPRS-205ENST00000588012 ISY1Q9ULR0 285 aaKnown RBP20.27■□□□□ 0.84
PTPRS-205ENST00000588012 RALBP1Q15311 655 aa20.27■□□□□ 0.84
PTPRS-205ENST00000588012 TERF2IPQ9NYB0 399 aa20.27■□□□□ 0.84
PTPRS-205ENST00000588012 RAB3GAP2Q9H2M9 1393 aa20.27■□□□□ 0.83
PTPRS-205ENST00000588012 GOLGA6L4A6NEF3 574 aa20.27■□□□□ 0.83
PTPRS-205ENST00000588012 CHMP4AQ9BY43 222 aa20.25■□□□□ 0.83
PTPRS-205ENST00000588012 B4GALNT3Q6L9W6 998 aa20.25■□□□□ 0.83
PTPRS-205ENST00000588012 FHOD3Q2V2M9 1422 aa20.25■□□□□ 0.83
PTPRS-205ENST00000588012 TMX4Q9H1E5 349 aaPredicted RBP20.24■□□□□ 0.83
PTPRS-205ENST00000588012 NGDNQ8NEJ9 315 aaKnown RBP20.23■□□□□ 0.83
PTPRS-205ENST00000588012 NUTM2DQ5VT03 806 aaPredicted RBP20.23■□□□□ 0.83
PTPRS-205ENST00000588012 JPH4Q96JJ6 628 aa20.23■□□□□ 0.83
PTPRS-205ENST00000588012 WIZO95785 1651 aa20.22■□□□□ 0.83
PTPRS-205ENST00000588012 APBB1O00213 710 aa20.22■□□□□ 0.83
PTPRS-205ENST00000588012 KIAA1211Q6ZU35 1233 aa20.2■□□□□ 0.82
PTPRS-205ENST00000588012 STK31Q9BXU1 1019 aa20.2■□□□□ 0.82
PTPRS-205ENST00000588012 ITPRIPQ8IWB1 547 aa20.2■□□□□ 0.82
PTPRS-205ENST00000588012 NRDCO43847 1150 aa20.19■□□□□ 0.82
PTPRS-205ENST00000588012 GNL2Q13823 731 aaKnown RBP20.18■□□□□ 0.82
PTPRS-205ENST00000588012 NOP58Q9Y2X3 529 aaKnown RBP20.17■□□□□ 0.82
PTPRS-205ENST00000588012 CLSTN1O94985 981 aa20.17■□□□□ 0.82
PTPRS-205ENST00000588012 AMPHP49418 695 aa20.15■□□□□ 0.82
PTPRS-205ENST00000588012 RWDD1Q9H446 243 aaPredicted RBP20.14■□□□□ 0.82
PTPRS-205ENST00000588012 GORABQ5T7V8 394 aa20.13■□□□□ 0.81
PTPRS-205ENST00000588012 CHMP3Q9Y3E7 222 aa20.13■□□□□ 0.81
PTPRS-205ENST00000588012 TAF7LQ5H9L4 462 aa20.12■□□□□ 0.81
PTPRS-205ENST00000588012 HDAC5Q9UQL6 1122 aa20.12■□□□□ 0.81
PTPRS-205ENST00000588012 RCAN3Q9UKA8 241 aa20.12■□□□□ 0.81
PTPRS-205ENST00000588012 LMOD3Q0VAK6 560 aa20.11■□□□□ 0.81
PTPRS-205ENST00000588012 ATAD2BQ9ULI0 1458 aa20.11■□□□□ 0.81
PTPRS-205ENST00000588012 FANCD2Q9BXW9 1451 aa20.1■□□□□ 0.81
PTPRS-205ENST00000588012 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.1■□□□□ 0.81
PTPRS-205ENST00000588012 GPATCH3Q96I76 525 aa20.1■□□□□ 0.81
PTPRS-205ENST00000588012 UACAQ9BZF9 1416 aa20.09■□□□□ 0.81
PTPRS-205ENST00000588012 L3MBTL2Q969R5 705 aa20.09■□□□□ 0.81
PTPRS-205ENST00000588012 SPRYD3Q8NCJ5 442 aa20.09■□□□□ 0.81
PTPRS-205ENST00000588012 SMC4Q9NTJ3 1288 aa20.09■□□□□ 0.81
PTPRS-205ENST00000588012 ERICH6BQ5W0A0 696 aa20.08■□□□□ 0.81
PTPRS-205ENST00000588012 PTPRGP23470 1445 aa20.08■□□□□ 0.81
PTPRS-205ENST00000588012 LTV1Q96GA3 475 aaPredicted RBP20.08■□□□□ 0.81
PTPRS-205ENST00000588012 TRAK1Q9UPV9 953 aa20.08■□□□□ 0.8
PTPRS-205ENST00000588012 NUTM2FA1L443 756 aa20.08■□□□□ 0.8
PTPRS-205ENST00000588012 CCDC144AA2RUR9 1427 aa20.06■□□□□ 0.8
PTPRS-205ENST00000588012 HMMRO75330 724 aa20.06■□□□□ 0.8
PTPRS-205ENST00000588012 PMFBP1Q8TBY8 1022 aa20.06■□□□□ 0.8
PTPRS-205ENST00000588012 G3V3G9 751 aa20.05■□□□□ 0.8
PTPRS-205ENST00000588012 DCAF8Q5TAQ9 597 aa20.05■□□□□ 0.8
PTPRS-205ENST00000588012 CYB5RLQ6IPT4 315 aa20.04■□□□□ 0.8
PTPRS-205ENST00000588012 CCDC146Q8IYE0 955 aa20.04■□□□□ 0.8
PTPRS-205ENST00000588012 OSCARQ8IYS5 282 aa20.03■□□□□ 0.8
PTPRS-205ENST00000588012 SMARCA4P51532 1647 aa20.03■□□□□ 0.8
PTPRS-205ENST00000588012 SLC4A10Q6U841 1118 aa20.03■□□□□ 0.8
PTPRS-205ENST00000588012 DRC7Q8IY82 874 aa20.02■□□□□ 0.79
PTPRS-205ENST00000588012 VGFO15240 615 aaPredicted RBP20.01■□□□□ 0.79
PTPRS-205ENST00000588012 NLRP13Q86W25 1043 aa20■□□□□ 0.79
PTPRS-205ENST00000588012 PHLDB1Q86UU1 1377 aa19.99■□□□□ 0.79
PTPRS-205ENST00000588012 TRIM6-TRIM34B2RNG4 842 aa19.99■□□□□ 0.79
PTPRS-205ENST00000588012 HTATSF1O43719 755 aaKnown RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms