RNA–Protein interactions for RNA: ENST00000587997.6

GFAP-210, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 609 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-210ENST00000587997 LRRIQ1Q96JM4 1722 aa24.76■■□□□ 1.55
GFAP-210ENST00000587997 SCAPERQ9BY12 1400 aa24.76■■□□□ 1.55
GFAP-210ENST00000587997 MAGI2Q86UL8 1455 aa24.76■■□□□ 1.55
GFAP-210ENST00000587997 YEATS2Q9ULM3 1422 aa24.75■■□□□ 1.55
GFAP-210ENST00000587997 PCF11O94913 1555 aaKnown RBP24.75■■□□□ 1.55
GFAP-210ENST00000587997 FER1L4A9Z1Z3 1794 aa24.75■■□□□ 1.55
GFAP-210ENST00000587997 SIGLEC1Q9BZZ2 1709 aa24.74■■□□□ 1.55
GFAP-210ENST00000587997 PLPPR3Q6T4P5 718 aa24.73■■□□□ 1.55
GFAP-210ENST00000587997 CLIP1P30622 1438 aa24.72■■□□□ 1.55
GFAP-210ENST00000587997 EFCAB2Q5VUJ9 269 aa24.72■■□□□ 1.55
GFAP-210ENST00000587997 ARHGAP5Q13017 1502 aa24.7■■□□□ 1.54
GFAP-210ENST00000587997 TROQ12816 1431 aaPredicted RBP24.69■■□□□ 1.54
GFAP-210ENST00000587997 MLECQ14165 292 aa24.68■■□□□ 1.54
GFAP-210ENST00000587997 LMTK3Q96Q04 1460 aa24.67■■□□□ 1.54
GFAP-210ENST00000587997 ATP10AO60312 1499 aa24.64■■□□□ 1.53
GFAP-210ENST00000587997 CDC42BPBQ9Y5S2 1711 aa24.64■■□□□ 1.53
GFAP-210ENST00000587997 MYT1LQ9UL68 1186 aa24.63■■□□□ 1.53
GFAP-210ENST00000587997 ZNF518AQ6AHZ1 1483 aa24.63■■□□□ 1.53
GFAP-210ENST00000587997 C9orf84Q5VXU9 1444 aa24.62■■□□□ 1.53
GFAP-210ENST00000587997 CCDC18Q5T9S5 1454 aa24.62■■□□□ 1.53
GFAP-210ENST00000587997 PREX2Q70Z35 1606 aa24.59■■□□□ 1.53
GFAP-210ENST00000587997 CASKIN1Q8WXD9 1431 aa24.57■■□□□ 1.52
GFAP-210ENST00000587997 KDM5CP41229 1560 aa24.57■■□□□ 1.52
GFAP-210ENST00000587997 ARHGEF12Q9NZN5 1544 aa24.56■■□□□ 1.52
GFAP-210ENST00000587997 HSPA2P54652 639 aa24.55■■□□□ 1.52
GFAP-210ENST00000587997 ITSN2Q9NZM3 1697 aa24.54■■□□□ 1.52
GFAP-210ENST00000587997 FBXO41Q8TF61 875 aa24.54■■□□□ 1.52
GFAP-210ENST00000587997 CDC42BPAQ5VT25 1732 aa24.54■■□□□ 1.52
GFAP-210ENST00000587997 PREX1Q8TCU6 1659 aa24.53■■□□□ 1.52
GFAP-210ENST00000587997 AFAP1Q8N556 730 aa24.53■■□□□ 1.52
GFAP-210ENST00000587997 DIP2CQ9Y2E4 1556 aa24.52■■□□□ 1.52
GFAP-210ENST00000587997 FYCO1Q9BQS8 1478 aa24.51■■□□□ 1.51
GFAP-210ENST00000587997 ABCA6Q8N139 1617 aa24.5■■□□□ 1.51
GFAP-210ENST00000587997 ABCC1P33527 1531 aa24.5■■□□□ 1.51
GFAP-210ENST00000587997 REREQ9P2R6 1566 aa24.46■■□□□ 1.51
GFAP-210ENST00000587997 MLH3Q9UHC1 1453 aa24.45■■□□□ 1.5
GFAP-210ENST00000587997 TRAPPC8Q9Y2L5 1435 aa24.43■■□□□ 1.5
GFAP-210ENST00000587997 CEBPAP49715 358 aaPredicted RBP24.42■■□□□ 1.5
GFAP-210ENST00000587997 ESF1Q9H501 851 aaKnown RBP24.42■■□□□ 1.5
GFAP-210ENST00000587997 KIDINS220Q9ULH0 1771 aa24.42■■□□□ 1.5
GFAP-210ENST00000587997 SETD1BQ9UPS6 1966 aaKnown RBP24.41■■□□□ 1.5
GFAP-210ENST00000587997 ZNF777Q9ULD5 760 aaPredicted RBP24.4■■□□□ 1.5
GFAP-210ENST00000587997 C3P01024 1663 aa24.4■■□□□ 1.5
GFAP-210ENST00000587997 SAMD9LQ8IVG5 1584 aa24.37■■□□□ 1.49
GFAP-210ENST00000587997 UHRF1BP1Q6BDS2 1440 aa24.36■■□□□ 1.49
GFAP-210ENST00000587997 AGLP35573 1532 aa24.36■■□□□ 1.49
GFAP-210ENST00000587997 SYCP2Q9BX26 1530 aa24.35■■□□□ 1.49
GFAP-210ENST00000587997 SUPT6HQ7KZ85 1726 aaKnown RBP24.32■■□□□ 1.48
GFAP-210ENST00000587997 GPATCH8Q9UKJ3 1502 aaKnown RBP24.31■■□□□ 1.48
GFAP-210ENST00000587997 STRCQ7RTU9 1775 aa24.31■■□□□ 1.48
GFAP-210ENST00000587997 MTUS2Q5JR59 1369 aa24.29■■□□□ 1.48
GFAP-210ENST00000587997 SPAG9O60271 1321 aaKnown RBP24.29■■□□□ 1.48
GFAP-210ENST00000587997 CCNB3Q8WWL7 1395 aa24.29■■□□□ 1.48
GFAP-210ENST00000587997 PLEKHH2Q8IVE3 1493 aa24.27■■□□□ 1.48
GFAP-210ENST00000587997 ATP7AQ04656 1500 aa24.27■■□□□ 1.48
GFAP-210ENST00000587997 HNRNPMP52272 730 aaKnown RBP eCLIP24.27■■□□□ 1.48
GFAP-210ENST00000587997 CERKQ8TCT0 537 aa24.27■■□□□ 1.48
GFAP-210ENST00000587997 CFDP1Q9UEE9 299 aaPredicted RBP24.27■■□□□ 1.48
GFAP-210ENST00000587997 CNTLNQ9NXG0 1405 aa24.27■■□□□ 1.48
GFAP-210ENST00000587997 DMRT2Q9Y5R5 561 aa24.26■■□□□ 1.47
GFAP-210ENST00000587997 MROH2AA6NES4 1674 aa24.26■■□□□ 1.47
GFAP-210ENST00000587997 INO80Q9ULG1 1556 aaPredicted RBP24.24■■□□□ 1.47
GFAP-210ENST00000587997 EHBP1L1Q8N3D4 1523 aa24.22■■□□□ 1.47
GFAP-210ENST00000587997 CLTCQ00610 1675 aaKnown RBP24.21■■□□□ 1.47
GFAP-210ENST00000587997 KIAA1107Q9UPP5 1409 aa24.21■■□□□ 1.47
GFAP-210ENST00000587997 ADGBQ8N7X0 1667 aa24.2■■□□□ 1.46
GFAP-210ENST00000587997 TIAM1Q13009 1591 aa24.2■■□□□ 1.46
GFAP-210ENST00000587997 A2MP01023 1474 aa24.16■■□□□ 1.46
GFAP-210ENST00000587997 PLXNC1O60486 1568 aa24.16■■□□□ 1.46
GFAP-210ENST00000587997 CEP162Q5TB80 1403 aa24.15■■□□□ 1.46
GFAP-210ENST00000587997 NPATQ14207 1427 aa24.12■■□□□ 1.45
GFAP-210ENST00000587997 PTPRTO14522 1441 aa24.11■■□□□ 1.45
GFAP-210ENST00000587997 ZMYM3Q14202 1370 aa24.11■■□□□ 1.45
GFAP-210ENST00000587997 GGT6Q6P531 493 aa24.1■■□□□ 1.45
GFAP-210ENST00000587997 CAMSAP1Q5T5Y3 1602 aa24.1■■□□□ 1.45
GFAP-210ENST00000587997 MYO3AQ8NEV4 1616 aa24.09■■□□□ 1.45
GFAP-210ENST00000587997 ZNF644Q9H582 1327 aaPredicted RBP24.09■■□□□ 1.45
GFAP-210ENST00000587997 ZNF142P52746 1687 aaPredicted RBP24.07■■□□□ 1.44
GFAP-210ENST00000587997 NCOA1Q15788 1441 aa24.07■■□□□ 1.44
GFAP-210ENST00000587997 MBD5Q9P267 1494 aa24.03■■□□□ 1.44
GFAP-210ENST00000587997 NCOA2Q15596 1464 aa24.02■■□□□ 1.44
GFAP-210ENST00000587997 CEP170BQ9Y4F5 1589 aaPredicted RBP24.02■■□□□ 1.44
GFAP-210ENST00000587997 RTEL1-TNFRSF6BF6WH68 1400 aa24.01■■□□□ 1.43
GFAP-210ENST00000587997 CAMSAP2Q08AD1 1489 aa24.01■■□□□ 1.43
GFAP-210ENST00000587997 CCDC141Q6ZP82 1450 aa24■■□□□ 1.43
GFAP-210ENST00000587997 PPP6R1Q9UPN7 881 aa23.99■■□□□ 1.43
GFAP-210ENST00000587997 PTPRKQ15262 1439 aa23.99■■□□□ 1.43
GFAP-210ENST00000587997 LTBP4Q8N2S1 1624 aa23.97■■□□□ 1.43
GFAP-210ENST00000587997 DHX29Q7Z478 1369 aaKnown RBP23.96■■□□□ 1.43
GFAP-210ENST00000587997 NCKAP5LQ9HCH0 1330 aa23.95■■□□□ 1.42
GFAP-210ENST00000587997 PLA2R1Q13018 1463 aa23.94■■□□□ 1.42
GFAP-210ENST00000587997 KIF3BO15066 747 aa23.93■■□□□ 1.42
GFAP-210ENST00000587997 ARHGEF5Q12774 1597 aa23.92■■□□□ 1.42
GFAP-210ENST00000587997 RSPH4AQ5TD94 716 aa23.92■■□□□ 1.42
GFAP-210ENST00000587997 IQSEC2Q5JU85 1478 aa23.92■■□□□ 1.42
GFAP-210ENST00000587997 KDM5DQ9BY66 1539 aa23.91■■□□□ 1.42
GFAP-210ENST00000587997 PKD2Q13563 968 aa23.91■■□□□ 1.42
GFAP-210ENST00000587997 VPS8Q8N3P4 1428 aa23.9■■□□□ 1.42
GFAP-210ENST00000587997 POLR1AO95602 1720 aaPredicted RBP23.9■■□□□ 1.42
GFAP-210ENST00000587997 FAM135AQ9P2D6 1515 aa23.89■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms