RNA–Protein interactions for RNA: ENST00000587905.5

LDLRAD4-212, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 5

Gene LDLRAD4, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-212ENST00000587905 ADGRL1O94910 1474 aa32.28■■■□□ 2.76
LDLRAD4-212ENST00000587905 DENND4BO75064 1496 aaPredicted RBP32.27■■■□□ 2.76
LDLRAD4-212ENST00000587905 FRMPD1Q5SYB0 1578 aa32.26■■■□□ 2.75
LDLRAD4-212ENST00000587905 RICTORQ6R327 1708 aa32.23■■■□□ 2.75
LDLRAD4-212ENST00000587905 SCAPERQ9BY12 1400 aa32.22■■■□□ 2.75
LDLRAD4-212ENST00000587905 CCNB3Q8WWL7 1395 aa32.19■■■□□ 2.74
LDLRAD4-212ENST00000587905 GPATCH8Q9UKJ3 1502 aaKnown RBP32.17■■■□□ 2.74
LDLRAD4-212ENST00000587905 SUPT6HQ7KZ85 1726 aaKnown RBP32.16■■■□□ 2.74
LDLRAD4-212ENST00000587905 ZNF777Q9ULD5 760 aaPredicted RBP32.15■■■□□ 2.74
LDLRAD4-212ENST00000587905 APLP2Q06481 763 aa32.14■■■□□ 2.74
LDLRAD4-212ENST00000587905 LRRC9Q6ZRR7 1453 aa32.14■■■□□ 2.74
LDLRAD4-212ENST00000587905 MAP3K1Q13233 1512 aa32.13■■■□□ 2.73
LDLRAD4-212ENST00000587905 POGZQ7Z3K3 1410 aa32.13■■■□□ 2.73
LDLRAD4-212ENST00000587905 NCOA2Q15596 1464 aa32.1■■■□□ 2.73
LDLRAD4-212ENST00000587905 KANK4Q5T7N3 995 aaPredicted RBP32.1■■■□□ 2.73
LDLRAD4-212ENST00000587905 CFDP1Q9UEE9 299 aaPredicted RBP32.1■■■□□ 2.73
LDLRAD4-212ENST00000587905 ITSN2Q9NZM3 1697 aa32.1■■■□□ 2.73
LDLRAD4-212ENST00000587905 ABCC1P33527 1531 aa32.09■■■□□ 2.73
LDLRAD4-212ENST00000587905 ZMYM4Q5VZL5 1548 aa32.08■■■□□ 2.73
LDLRAD4-212ENST00000587905 SAMD9LQ8IVG5 1584 aa32.07■■■□□ 2.72
LDLRAD4-212ENST00000587905 ZNF518AQ6AHZ1 1483 aa32.04■■■□□ 2.72
LDLRAD4-212ENST00000587905 ARHGEF40Q8TER5 1519 aa32.04■■■□□ 2.72
LDLRAD4-212ENST00000587905 AEBP2Q6ZN18 517 aaPredicted RBP32.03■■■□□ 2.72
LDLRAD4-212ENST00000587905 ARHGEF12Q9NZN5 1544 aa32.03■■■□□ 2.72
LDLRAD4-212ENST00000587905 ZFYVE16Q7Z3T8 1539 aa32.02■■■□□ 2.72
LDLRAD4-212ENST00000587905 AFAP1Q8N556 730 aa32.02■■■□□ 2.72
LDLRAD4-212ENST00000587905 YEATS2Q9ULM3 1422 aa32■■■□□ 2.71
LDLRAD4-212ENST00000587905 SYCP2Q9BX26 1530 aa32■■■□□ 2.71
LDLRAD4-212ENST00000587905 KDM4FA0A1W2PPD8 638 aa32■■■□□ 2.71
LDLRAD4-212ENST00000587905 MYT1LQ9UL68 1186 aa32■■■□□ 2.71
LDLRAD4-212ENST00000587905 TRAPPC8Q9Y2L5 1435 aa32■■■□□ 2.71
LDLRAD4-212ENST00000587905 MAGI2Q86UL8 1455 aa31.97■■■□□ 2.71
LDLRAD4-212ENST00000587905 KDM5CP41229 1560 aa31.97■■■□□ 2.71
LDLRAD4-212ENST00000587905 HNRNPMP52272 730 aaKnown RBP eCLIP31.95■■■□□ 2.713e-6■■■■□ 20.5
LDLRAD4-212ENST00000587905 ZNF644Q9H582 1327 aaPredicted RBP31.95■■■□□ 2.7
LDLRAD4-212ENST00000587905 HECW2Q9P2P5 1572 aa31.94■■■□□ 2.7
LDLRAD4-212ENST00000587905 PLEKHH2Q8IVE3 1493 aa31.94■■■□□ 2.7
LDLRAD4-212ENST00000587905 ARID4BQ4LE39 1312 aaPredicted RBP31.94■■■□□ 2.7
LDLRAD4-212ENST00000587905 KIAA1107Q9UPP5 1409 aa31.89■■■□□ 2.7
LDLRAD4-212ENST00000587905 CAMSAP2Q08AD1 1489 aa31.86■■■□□ 2.69
LDLRAD4-212ENST00000587905 MLH3Q9UHC1 1453 aa31.84■■■□□ 2.69
LDLRAD4-212ENST00000587905 ATP10AO60312 1499 aa31.84■■■□□ 2.69
LDLRAD4-212ENST00000587905 SIGLEC1Q9BZZ2 1709 aa31.83■■■□□ 2.69
LDLRAD4-212ENST00000587905 ABCA6Q8N139 1617 aa31.83■■■□□ 2.69
LDLRAD4-212ENST00000587905 MYOM3Q5VTT5 1437 aa31.83■■■□□ 2.69
LDLRAD4-212ENST00000587905 DIP2CQ9Y2E4 1556 aa31.82■■■□□ 2.68
LDLRAD4-212ENST00000587905 C9orf84Q5VXU9 1444 aa31.82■■■□□ 2.68
LDLRAD4-212ENST00000587905 KIDINS220Q9ULH0 1771 aa31.81■■■□□ 2.68
LDLRAD4-212ENST00000587905 SPAG9O60271 1321 aaKnown RBP31.81■■■□□ 2.68
LDLRAD4-212ENST00000587905 BCORL1Q5H9F3 1711 aa31.79■■■□□ 2.68
LDLRAD4-212ENST00000587905 MBD5Q9P267 1494 aa31.78■■■□□ 2.68
LDLRAD4-212ENST00000587905 ATP7AQ04656 1500 aa31.75■■■□□ 2.67
LDLRAD4-212ENST00000587905 INO80Q9ULG1 1556 aaPredicted RBP31.74■■■□□ 2.67
LDLRAD4-212ENST00000587905 MLECQ14165 292 aa31.74■■■□□ 2.67
LDLRAD4-212ENST00000587905 MIA2Q96PC5 1412 aa31.74■■■□□ 2.67
LDLRAD4-212ENST00000587905 ADAMTSL3P82987 1691 aa31.73■■■□□ 2.67
LDLRAD4-212ENST00000587905 CCDC141Q6ZP82 1450 aa31.72■■■□□ 2.67
LDLRAD4-212ENST00000587905 MADDQ8WXG6 1647 aa31.7■■■□□ 2.66
LDLRAD4-212ENST00000587905 PPARGC1BQ86YN6 1023 aaKnown RBP31.68■■■□□ 2.66
LDLRAD4-212ENST00000587905 ARHGEF5Q12774 1597 aa31.68■■■□□ 2.66
LDLRAD4-212ENST00000587905 REREQ9P2R6 1566 aa31.68■■■□□ 2.66
LDLRAD4-212ENST00000587905 PTPN23Q9H3S7 1636 aa31.67■■■□□ 2.66
LDLRAD4-212ENST00000587905 FGD6Q6ZV73 1430 aa31.65■■■□□ 2.66
LDLRAD4-212ENST00000587905 RSPH4AQ5TD94 716 aa31.64■■■□□ 2.66
LDLRAD4-212ENST00000587905 RIMS1Q86UR5 1692 aaKnown RBP31.63■■■□□ 2.65
LDLRAD4-212ENST00000587905 TSPY4P0CV99 314 aa31.6■■■□□ 2.65
LDLRAD4-212ENST00000587905 TSPY10P0CW01 314 aa31.6■■■□□ 2.65
LDLRAD4-212ENST00000587905 FER1L4A9Z1Z3 1794 aa31.6■■■□□ 2.65
LDLRAD4-212ENST00000587905 RTEL1-TNFRSF6BF6WH68 1400 aa31.59■■■□□ 2.65
LDLRAD4-212ENST00000587905 ADGBQ8N7X0 1667 aa31.59■■■□□ 2.65
LDLRAD4-212ENST00000587905 A2MP01023 1474 aa31.58■■■□□ 2.65
LDLRAD4-212ENST00000587905 AGLP35573 1532 aa31.57■■■□□ 2.64
LDLRAD4-212ENST00000587905 PTPRMP28827 1452 aa31.57■■■□□ 2.64
LDLRAD4-212ENST00000587905 TCOF1Q13428 1488 aaKnown RBP31.54■■■□□ 2.64
LDLRAD4-212ENST00000587905 PLPPR3Q6T4P5 718 aa31.54■■■□□ 2.64
LDLRAD4-212ENST00000587905 PLXNC1O60486 1568 aa31.52■■■□□ 2.64
LDLRAD4-212ENST00000587905 FAM50AQ14320 339 aaKnown RBP31.51■■■□□ 2.63
LDLRAD4-212ENST00000587905 MAST1Q9Y2H9 1570 aa31.5■■■□□ 2.63
LDLRAD4-212ENST00000587905 CROCC2H7BZ55 1655 aa31.5■■■□□ 2.63
LDLRAD4-212ENST00000587905 DNMT1P26358 1616 aaKnown RBP31.49■■■□□ 2.63
LDLRAD4-212ENST00000587905 ABCC5O15440 1437 aa31.47■■■□□ 2.63
LDLRAD4-212ENST00000587905 DAPK1P53355 1430 aa31.46■■■□□ 2.63
LDLRAD4-212ENST00000587905 DHX29Q7Z478 1369 aaKnown RBP31.44■■■□□ 2.62
LDLRAD4-212ENST00000587905 ESF1Q9H501 851 aaKnown RBP31.44■■■□□ 2.62
LDLRAD4-212ENST00000587905 SHANK2Q9UPX8 1470 aa31.41■■■□□ 2.62
LDLRAD4-212ENST00000587905 GGT6Q6P531 493 aa31.41■■■□□ 2.62
LDLRAD4-212ENST00000587905 CHIC2Q9UKJ5 165 aa31.38■■■□□ 2.61
LDLRAD4-212ENST00000587905 KIF3BO15066 747 aa31.37■■■□□ 2.61
LDLRAD4-212ENST00000587905 CEBPAP49715 358 aaPredicted RBP31.35■■■□□ 2.61
LDLRAD4-212ENST00000587905 RRP7BPQ9NSQ0 103 aa31.33■■■□□ 2.61
LDLRAD4-212ENST00000587905 CLTCQ00610 1675 aaKnown RBP31.32■■■□□ 2.6
LDLRAD4-212ENST00000587905 KIF15Q9NS87 1388 aa31.31■■■□□ 2.6
LDLRAD4-212ENST00000587905 CNTLNQ9NXG0 1405 aa31.31■■■□□ 2.6
LDLRAD4-212ENST00000587905 C3P01024 1663 aa31.3■■■□□ 2.6
LDLRAD4-212ENST00000587905 DUOX2Q9NRD8 1548 aa31.29■■■□□ 2.6
LDLRAD4-212ENST00000587905 ANKRD30AQ9BXX3 1397 aa31.28■■■□□ 2.6
LDLRAD4-212ENST00000587905 ITGAEP38570 1179 aa31.26■■■□□ 2.59
LDLRAD4-212ENST00000587905 MROH2AA6NES4 1674 aa31.25■■■□□ 2.59
LDLRAD4-212ENST00000587905 EIF2AK4Q9P2K8 1649 aaKnown RBP31.25■■■□□ 2.59
LDLRAD4-212ENST00000587905 NCOA1Q15788 1441 aa31.21■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms