RNA–Protein interactions for RNA: ENST00000587341.5

ZNF542P-209, Transcript of zinc finger protein 542, pseudogene, humanhuman

TSL 5

Gene ZNF542P, Length 1,076 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF542P-209ENST00000587341 SNPHO15079 494 aa15.85■□□□□ 0.13
ZNF542P-209ENST00000587341 TMEM92Q6UXU6 159 aa15.83■□□□□ 0.12
ZNF542P-209ENST00000587341 SHROOM4Q9ULL8 1493 aa15.79■□□□□ 0.12
ZNF542P-209ENST00000587341 HS6ST3Q8IZP7 471 aa15.79■□□□□ 0.12
ZNF542P-209ENST00000587341 CHGAP10645 457 aaKnown RBP15.76■□□□□ 0.11
ZNF542P-209ENST00000587341 HOXB3P14651 431 aaPredicted RBP15.76■□□□□ 0.11
ZNF542P-209ENST00000587341 MARVELD3Q96A59 401 aa15.72■□□□□ 0.11
ZNF542P-209ENST00000587341 PPP1R37O75864 691 aa15.7■□□□□ 0.1
ZNF542P-209ENST00000587341 PCDH10Q9P2E7 1040 aa15.68■□□□□ 0.1
ZNF542P-209ENST00000587341 NKX1-1Q15270 411 aaPredicted RBP15.65■□□□□ 0.1
ZNF542P-209ENST00000587341 CDAN1Q8IWY9 1227 aa15.63■□□□□ 0.09
ZNF542P-209ENST00000587341 PLSCR2Q9NRY7 297 aa15.62■□□□□ 0.09
ZNF542P-209ENST00000587341 DOK7Q18PE1 504 aa15.61■□□□□ 0.09
ZNF542P-209ENST00000587341 DNAJC5Q9H3Z4 198 aa15.61■□□□□ 0.09
ZNF542P-209ENST00000587341 EIF4G1Q04637 1599 aaKnown RBP15.58■□□□□ 0.09
ZNF542P-209ENST00000587341 KIF3CO14782 793 aa15.58■□□□□ 0.08
ZNF542P-209ENST00000587341 EMP3P54852 163 aa15.58■□□□□ 0.08
ZNF542P-209ENST00000587341 ZNF710Q8N1W2 664 aa15.57■□□□□ 0.08
ZNF542P-209ENST00000587341 POTEB3A0JP26 581 aa15.56■□□□□ 0.08
ZNF542P-209ENST00000587341 C2orf72A6NCS6 295 aa15.56■□□□□ 0.08
ZNF542P-209ENST00000587341 POTEBQ6S5H4 581 aa15.56■□□□□ 0.08
ZNF542P-209ENST00000587341 HOXB1P14653 301 aaPredicted RBP15.54■□□□□ 0.08
ZNF542P-209ENST00000587341 FAM205CA6NFA0 338 aa15.52■□□□□ 0.08
ZNF542P-209ENST00000587341 CC2D2AQ9P2K1 1620 aa15.52■□□□□ 0.08
ZNF542P-209ENST00000587341 RIMBP2O15034 1052 aa15.49■□□□□ 0.07
ZNF542P-209ENST00000587341 HS3ST6Q96QI5 342 aa15.49■□□□□ 0.07
ZNF542P-209ENST00000587341 GPR153Q6NV75 609 aa15.47■□□□□ 0.07
ZNF542P-209ENST00000587341 TMC2Q8TDI7 906 aa15.46■□□□□ 0.07
ZNF542P-209ENST00000587341 ZSWIM6Q9HCJ5 1215 aa15.45■□□□□ 0.06
ZNF542P-209ENST00000587341 CECR2Q9BXF3 1484 aa15.43■□□□□ 0.06
ZNF542P-209ENST00000587341 GTPBP6O43824 516 aaPredicted RBP15.42■□□□□ 0.06
ZNF542P-209ENST00000587341 ARSIQ5FYB1 569 aa15.42■□□□□ 0.06
ZNF542P-209ENST00000587341 KHSRPQ92945 711 aaKnown RBP eCLIP15.41■□□□□ 0.06
ZNF542P-209ENST00000587341 ERBB3P21860 1342 aa15.39■□□□□ 0.05
ZNF542P-209ENST00000587341 RYDENQ9NUL5 291 aaKnown RBP15.38■□□□□ 0.05
ZNF542P-209ENST00000587341 KRTAP3-3Q9BYR6 98 aa15.36■□□□□ 0.05
ZNF542P-209ENST00000587341 KRTAP3-2Q9BYR7 98 aa15.36■□□□□ 0.05
ZNF542P-209ENST00000587341 RTN4Q9NQC3 1192 aaKnown RBP15.36■□□□□ 0.05
ZNF542P-209ENST00000587341 VARS2Q5ST30 1063 aaKnown RBP15.34■□□□□ 0.05
ZNF542P-209ENST00000587341 GPHNQ9NQX3 736 aaPredicted RBP15.34■□□□□ 0.05
ZNF542P-209ENST00000587341 AMER1Q5JTC6 1135 aaPredicted RBP15.33■□□□□ 0.04
ZNF542P-209ENST00000587341 SLC34A2O95436 690 aa15.32■□□□□ 0.04
ZNF542P-209ENST00000587341 SMARCA4P51532 1647 aa15.32■□□□□ 0.04
ZNF542P-209ENST00000587341 FOXK1P85037 733 aa15.31■□□□□ 0.04
ZNF542P-209ENST00000587341 BAZ1AQ9NRL2 1556 aaPredicted RBP15.31■□□□□ 0.04
ZNF542P-209ENST00000587341 DSG2Q14126 1118 aa15.3■□□□□ 0.04
ZNF542P-209ENST00000587341 PLPP6Q8IY26 295 aa15.29■□□□□ 0.04
ZNF542P-209ENST00000587341 PCDHGA4Q9Y5G9 962 aa15.29■□□□□ 0.04
ZNF542P-209ENST00000587341 NUDT7P0C024 238 aa15.27■□□□□ 0.04
ZNF542P-209ENST00000587341 SPNS2Q8IVW8 549 aa15.26■□□□□ 0.03
ZNF542P-209ENST00000587341 MROH2BQ7Z745 1585 aa15.26■□□□□ 0.03
ZNF542P-209ENST00000587341 CRISPLD2Q9H0B8 497 aa15.25■□□□□ 0.03
ZNF542P-209ENST00000587341 ATAD2BQ9ULI0 1458 aa15.25■□□□□ 0.03
ZNF542P-209ENST00000587341 NCKAP5LQ9HCH0 1330 aa15.23■□□□□ 0.03
ZNF542P-209ENST00000587341 ZNF316A6NFI3 1004 aaPredicted RBP15.23■□□□□ 0.03
ZNF542P-209ENST00000587341 ZNF687Q8N1G0 1237 aa15.21■□□□□ 0.03
ZNF542P-209ENST00000587341 NCAPD3P42695 1498 aa15.2■□□□□ 0.02
ZNF542P-209ENST00000587341 PTCD2Q8WV60 388 aaKnown RBP15.2■□□□□ 0.02
ZNF542P-209ENST00000587341 SMARCA2P51531 1590 aa15.19■□□□□ 0.02
ZNF542P-209ENST00000587341 LHX6Q9UPM6 363 aa15.18■□□□□ 0.02
ZNF542P-209ENST00000587341 KDM4FA0A1W2PPD8 638 aa15.17■□□□□ 0.02
ZNF542P-209ENST00000587341 MMRN1Q13201 1228 aa15.16■□□□□ 0.02
ZNF542P-209ENST00000587341 BBXQ8WY36 941 aaPredicted RBP15.16■□□□□ 0.02
ZNF542P-209ENST00000587341 PEG3Q9GZU2 1588 aa15.15■□□□□ 0.02
ZNF542P-209ENST00000587341 PDE4AP27815 886 aa15.14■□□□□ 0.01
ZNF542P-209ENST00000587341 PPP1R15BQ5SWA1 713 aa15.14■□□□□ 0.01
ZNF542P-209ENST00000587341 CADPS2Q86UW7 1296 aa15.14■□□□□ 0.01
ZNF542P-209ENST00000587341 HMGXB3Q12766 1538 aa15.13■□□□□ 0.01
ZNF542P-209ENST00000587341 BAZ1BQ9UIG0 1483 aaKnown RBP15.12■□□□□ 0.01
ZNF542P-209ENST00000587341 LARP6Q9BRS8 491 aaKnown RBP15.1■□□□□ 0.01
ZNF542P-209ENST00000587341 OXER1Q8TDS5 423 aa15.09■□□□□ 0.01
ZNF542P-209ENST00000587341 RSF1Q96T23 1441 aaPredicted RBP15.09■□□□□ 0.01
ZNF542P-209ENST00000587341 UPF1Q92900 1129 aaKnown RBP eCLIP15.08■□□□□ 0
ZNF542P-209ENST00000587341 WIZO95785 1651 aa15.08■□□□□ 0
ZNF542P-209ENST00000587341 POTEEQ6S8J3 1075 aa15.06■□□□□ 0
ZNF542P-209ENST00000587341 MFSD10Q14728 455 aa15.05■□□□□ -0
ZNF542P-209ENST00000587341 DDX27Q96GQ7 796 aaKnown RBP15.05■□□□□ -0
ZNF542P-209ENST00000587341 TBC1D12O60347 775 aa15.04■□□□□ -0
ZNF542P-209ENST00000587341 AXIN2Q9Y2T1 843 aa15□□□□□ -0.01
ZNF542P-209ENST00000587341 SPRYD3Q8NCJ5 442 aa14.98□□□□□ -0.01
ZNF542P-209ENST00000587341 LSM11P83369 360 aaKnown RBP eCLIP14.96□□□□□ -0.01
ZNF542P-209ENST00000587341 ANKRD13DQ6ZTN6 518 aa14.96□□□□□ -0.01
ZNF542P-209ENST00000587341 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.96□□□□□ -0.01
ZNF542P-209ENST00000587341 PSDA5PKW4 1024 aaPredicted RBP14.95□□□□□ -0.02
ZNF542P-209ENST00000587341 EMILIN3Q9NT22 766 aa14.95□□□□□ -0.02
ZNF542P-209ENST00000587341 PBX2P40425 430 aa14.94□□□□□ -0.02
ZNF542P-209ENST00000587341 PAXIP1Q6ZW49 1069 aaPredicted RBP14.92□□□□□ -0.02
ZNF542P-209ENST00000587341 TOP2AP11388 1531 aaKnown RBP14.92□□□□□ -0.02
ZNF542P-209ENST00000587341 CFAP44Q96MT7 982 aa14.9□□□□□ -0.02
ZNF542P-209ENST00000587341 PPP4R3BQ5MIZ7 849 aa14.89□□□□□ -0.03
ZNF542P-209ENST00000587341 NESP48681 1621 aa14.88□□□□□ -0.03
ZNF542P-209ENST00000587341 ARHGAP33O14559 1287 aa14.88□□□□□ -0.03
ZNF542P-209ENST00000587341 EVI5O60447 810 aa14.88□□□□□ -0.03
ZNF542P-209ENST00000587341 PSEN2P49810 448 aa14.87□□□□□ -0.03
ZNF542P-209ENST00000587341 ANO8Q9HCE9 1232 aaPredicted RBP14.87□□□□□ -0.03
ZNF542P-209ENST00000587341 MYT1LQ9UL68 1186 aa14.86□□□□□ -0.03
ZNF542P-209ENST00000587341 MAP3K9P80192 1104 aa14.85□□□□□ -0.03
ZNF542P-209ENST00000587341 DMRTA1Q5VZB9 504 aa14.85□□□□□ -0.03
ZNF542P-209ENST00000587341 ZNF454Q8N9F8 522 aa14.85□□□□□ -0.03
ZNF542P-209ENST00000587341 CAMK2BQ13554 666 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms