RNA–Protein interactions for RNA: ENST00000587235.5

TCF3-210, Transcript of transcription factor 3, human

TSL 5

Gene TCF3, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF3-210	ENST00000587235	BCORL1	Q5H9F3	1711 aa		40.99	■■■■■ 4.15
TCF3-210	ENST00000587235	PTPRM	P28827	1452 aa		40.99	■■■■■ 4.15
TCF3-210	ENST00000587235	POGZ	Q7Z3K3	1410 aa		40.98	■■■■■ 4.15
TCF3-210	ENST00000587235	YEATS2	Q9ULM3	1422 aa		40.98	■■■■■ 4.15
TCF3-210	ENST00000587235	MAGI2	Q86UL8	1455 aa		40.97	■■■■■ 4.15
TCF3-210	ENST00000587235	CCDC18	Q5T9S5	1454 aa		40.96	■■■■■ 4.15
TCF3-210	ENST00000587235	ZFYVE16	Q7Z3T8	1539 aa		40.96	■■■■■ 4.15
TCF3-210	ENST00000587235	ARHGAP5	Q13017	1502 aa		40.91	■■■■■ 4.14
TCF3-210	ENST00000587235	MADD	Q8WXG6	1647 aa		40.88	■■■■■ 4.13
TCF3-210	ENST00000587235	FYCO1	Q9BQS8	1478 aa		40.88	■■■■■ 4.13
TCF3-210	ENST00000587235	AFAP1	Q8N556	730 aa		40.84	■■■■■ 4.13
TCF3-210	ENST00000587235	MLEC	Q14165	292 aa		40.79	■■■■■ 4.12
TCF3-210	ENST00000587235	SIGLEC1	Q9BZZ2	1709 aa		40.79	■■■■■ 4.12
TCF3-210	ENST00000587235	ATP10A	O60312	1499 aa		40.78	■■■■■ 4.12
TCF3-210	ENST00000587235	ZNF518A	Q6AHZ1	1483 aa		40.78	■■■■■ 4.12
TCF3-210	ENST00000587235	CDC42BPB	Q9Y5S2	1711 aa		40.78	■■■■■ 4.12
TCF3-210	ENST00000587235	RIMS1	Q86UR5	1692 aa	Known RBP	40.74	■■■■■ 4.11
TCF3-210	ENST00000587235	MYT1L	Q9UL68	1186 aa		40.73	■■■■■ 4.11
TCF3-210	ENST00000587235	PREX2	Q70Z35	1606 aa		40.71	■■■■■ 4.11
TCF3-210	ENST00000587235	C9orf84	Q5VXU9	1444 aa		40.7	■■■■■ 4.11
TCF3-210	ENST00000587235	PLPPR3	Q6T4P5	718 aa		40.69	■■■■■ 4.1
TCF3-210	ENST00000587235	KDM5C	P41229	1560 aa		40.68	■■■■■ 4.1
TCF3-210	ENST00000587235	ARHGEF12	Q9NZN5	1544 aa		40.64	■■■■■ 4.1
TCF3-210	ENST00000587235	TRAPPC8	Q9Y2L5	1435 aa		40.64	■■■■■ 4.1
TCF3-210	ENST00000587235	CDC42BPA	Q5VT25	1732 aa		40.62	■■■■■ 4.09
TCF3-210	ENST00000587235	ZNF777	Q9ULD5	760 aa	Predicted RBP	40.61	■■■■■ 4.09
TCF3-210	ENST00000587235	ABCC1	P33527	1531 aa		40.61	■■■■■ 4.09
TCF3-210	ENST00000587235	MLH3	Q9UHC1	1453 aa		40.58	■■■■■ 4.09
TCF3-210	ENST00000587235	ILDR1	Q86SU0	546 aa	Predicted RBP	40.57	■■■■■ 4.09
TCF3-210	ENST00000587235	GPATCH8	Q9UKJ3	1502 aa	Known RBP	40.57	■■■■■ 4.08
TCF3-210	ENST00000587235	CEP162	Q5TB80	1403 aa		40.56	■■■■■ 4.08
TCF3-210	ENST00000587235	LMTK3	Q96Q04	1460 aa		40.54	■■■■■ 4.08
TCF3-210	ENST00000587235	MTUS2	Q5JR59	1369 aa		40.54	■■■■■ 4.08
TCF3-210	ENST00000587235	FER1L4	A9Z1Z3	1794 aa		40.53	■■■■■ 4.08
TCF3-210	ENST00000587235	ITSN2	Q9NZM3	1697 aa		40.53	■■■■■ 4.08
TCF3-210	ENST00000587235	DIP2C	Q9Y2E4	1556 aa		40.52	■■■■■ 4.08
TCF3-210	ENST00000587235	CFDP1	Q9UEE9	299 aa	Predicted RBP	40.49	■■■■■ 4.07
TCF3-210	ENST00000587235	CCNB3	Q8WWL7	1395 aa		40.48	■■■■■ 4.07
TCF3-210	ENST00000587235	HNRNPM	P52272	730 aa	Known RBP eCLIP	40.47	■■■■■ 4.07	9e-9	■■■■■ 30
TCF3-210	ENST00000587235	ABCA6	Q8N139	1617 aa		40.46	■■■■■ 4.07
TCF3-210	ENST00000587235	SAMD9L	Q8IVG5	1584 aa		40.44	■■■■■ 4.06
TCF3-210	ENST00000587235	RERE	Q9P2R6	1566 aa		40.44	■■■■■ 4.06
TCF3-210	ENST00000587235	CEBPA	P49715	358 aa	Predicted RBP	40.43	■■■■■ 4.06
TCF3-210	ENST00000587235	LOC105371045	A0A1W2PR82	267 aa		40.42	■■■■■ 4.06
TCF3-210	ENST00000587235	HSPA2	P54652	639 aa		40.42	■■■■■ 4.06
TCF3-210	ENST00000587235	KIDINS220	Q9ULH0	1771 aa		40.39	■■■■■ 4.06
TCF3-210	ENST00000587235	SYCP2	Q9BX26	1530 aa		40.39	■■■■■ 4.06
TCF3-210	ENST00000587235	SPAG9	O60271	1321 aa	Known RBP	40.37	■■■■■ 4.05
TCF3-210	ENST00000587235	KIAA1107	Q9UPP5	1409 aa		40.36	■■■■■ 4.05
TCF3-210	ENST00000587235	AGL	P35573	1532 aa		40.35	■■■■■ 4.05
TCF3-210	ENST00000587235	PLEKHH2	Q8IVE3	1493 aa		40.34	■■■■■ 4.05
TCF3-210	ENST00000587235	EHBP1L1	Q8N3D4	1523 aa		40.32	■■■■■ 4.04
TCF3-210	ENST00000587235	ESF1	Q9H501	851 aa	Known RBP	40.29	■■■■■ 4.04
TCF3-210	ENST00000587235	ZNF644	Q9H582	1327 aa	Predicted RBP	40.28	■■■■■ 4.04
TCF3-210	ENST00000587235	TIAM1	Q13009	1591 aa		40.25	■■■■■ 4.03
TCF3-210	ENST00000587235	ATP7A	Q04656	1500 aa		40.19	■■■■■ 4.02
TCF3-210	ENST00000587235	SETD1B	Q9UPS6	1966 aa	Known RBP	40.16	■■■■■ 4.02
TCF3-210	ENST00000587235	PREX1	Q8TCU6	1659 aa		40.16	■■■■■ 4.02
TCF3-210	ENST00000587235	VPS8	Q8N3P4	1428 aa		40.13	■■■■■ 4.01
TCF3-210	ENST00000587235	INO80	Q9ULG1	1556 aa	Predicted RBP	40.13	■■■■■ 4.01
TCF3-210	ENST00000587235	NCOA2	Q15596	1464 aa		40.13	■■■■■ 4.01
TCF3-210	ENST00000587235	MBD5	Q9P267	1494 aa		40.13	■■■■■ 4.01
TCF3-210	ENST00000587235	C3	P01024	1663 aa		40.11	■■■■■ 4.01
TCF3-210	ENST00000587235	CNTLN	Q9NXG0	1405 aa		40.11	■■■■■ 4.01
TCF3-210	ENST00000587235	A2M	P01023	1474 aa		40.11	■■■■■ 4.01
TCF3-210	ENST00000587235	UHRF1BP1	Q6BDS2	1440 aa		40.1	■■■■■ 4.01
TCF3-210	ENST00000587235	SUPT6H	Q7KZ85	1726 aa	Known RBP	40.1	■■■■■ 4.01
TCF3-210	ENST00000587235	FBXO41	Q8TF61	875 aa		40.08	■■■■■ 4.01
TCF3-210	ENST00000587235	PLXNC1	O60486	1568 aa		40.02	■■■■■ 4
TCF3-210	ENST00000587235	GGT6	Q6P531	493 aa		40.02	■■■■■ 4
TCF3-210	ENST00000587235	ZMYM3	Q14202	1370 aa		40.01	■■■■■ 4
TCF3-210	ENST00000587235	RTEL1-TNFRSF6B	F6WH68	1400 aa		40	■■■■□ 3.99
TCF3-210	ENST00000587235	LRRC9	Q6ZRR7	1453 aa		39.99	■■■■□ 3.99
TCF3-210	ENST00000587235	RSPH4A	Q5TD94	716 aa		39.98	■■■■□ 3.99
TCF3-210	ENST00000587235	CAMSAP2	Q08AD1	1489 aa		39.96	■■■■□ 3.99
TCF3-210	ENST00000587235	ADGB	Q8N7X0	1667 aa		39.95	■■■■□ 3.99
TCF3-210	ENST00000587235	KANK4	Q5T7N3	995 aa	Predicted RBP	39.94	■■■■□ 3.98
TCF3-210	ENST00000587235	CCDC141	Q6ZP82	1450 aa		39.93	■■■■□ 3.98
TCF3-210	ENST00000587235	DMRT2	Q9Y5R5	561 aa		39.92	■■■■□ 3.98
TCF3-210	ENST00000587235	MROH2A	A6NES4	1674 aa		39.92	■■■■□ 3.98
TCF3-210	ENST00000587235	PPP6R1	Q9UPN7	881 aa		39.91	■■■■□ 3.98
TCF3-210	ENST00000587235	DHX29	Q7Z478	1369 aa	Known RBP	39.91	■■■■□ 3.98
TCF3-210	ENST00000587235	NPAT	Q14207	1427 aa		39.9	■■■■□ 3.98
TCF3-210	ENST00000587235	STRC	Q7RTU9	1775 aa		39.88	■■■■□ 3.97
TCF3-210	ENST00000587235	MAP3K1	Q13233	1512 aa		39.87	■■■■□ 3.97
TCF3-210	ENST00000587235	CLTC	Q00610	1675 aa	Known RBP	39.86	■■■■□ 3.97
TCF3-210	ENST00000587235	TSPY4	P0CV99	314 aa		39.84	■■■■□ 3.97
TCF3-210	ENST00000587235	TSPY10	P0CW01	314 aa		39.84	■■■■□ 3.97
TCF3-210	ENST00000587235	CERK	Q8TCT0	537 aa		39.84	■■■■□ 3.97
TCF3-210	ENST00000587235	KIF3B	O15066	747 aa		39.82	■■■■□ 3.97
TCF3-210	ENST00000587235	ARHGEF5	Q12774	1597 aa		39.79	■■■■□ 3.96
TCF3-210	ENST00000587235	PTPRK	Q15262	1439 aa		39.77	■■■■□ 3.96
TCF3-210	ENST00000587235	APLP2	Q06481	763 aa		39.73	■■■■□ 3.95
TCF3-210	ENST00000587235	PTPRT	O14522	1441 aa		39.72	■■■■□ 3.95
TCF3-210	ENST00000587235	MYOM3	Q5VTT5	1437 aa		39.71	■■■■□ 3.95
TCF3-210	ENST00000587235	NCOA1	Q15788	1441 aa		39.7	■■■■□ 3.95
TCF3-210	ENST00000587235	MIA2	Q96PC5	1412 aa		39.69	■■■■□ 3.94
TCF3-210	ENST00000587235	CAMSAP1	Q5T5Y3	1602 aa		39.65	■■■■□ 3.94
TCF3-210	ENST00000587235	WASHC2C	Q9Y4E1	1318 aa		39.64	■■■■□ 3.94
TCF3-210	ENST00000587235	MYO3A	Q8NEV4	1616 aa		39.6	■■■■□ 3.93

Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms