RNA–Protein interactions for RNA: ENST00000587173.5

VAT1-205, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,174 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-205ENST00000587173 TROQ12816 1431 aaPredicted RBP25.78■■□□□ 1.72
VAT1-205ENST00000587173 EFCAB2Q5VUJ9 269 aa25.77■■□□□ 1.72
VAT1-205ENST00000587173 KIF14Q15058 1648 aa25.75■■□□□ 1.71
VAT1-205ENST00000587173 CLIP1P30622 1438 aa25.74■■□□□ 1.71
VAT1-205ENST00000587173 RIMS1Q86UR5 1692 aaKnown RBP25.74■■□□□ 1.71
VAT1-205ENST00000587173 MYO5CQ9NQX4 1742 aa25.73■■□□□ 1.71
VAT1-205ENST00000587173 PCF11O94913 1555 aaKnown RBP25.71■■□□□ 1.71
VAT1-205ENST00000587173 SIGLEC1Q9BZZ2 1709 aa25.71■■□□□ 1.71
VAT1-205ENST00000587173 MLECQ14165 292 aa25.7■■□□□ 1.7
VAT1-205ENST00000587173 ARHGAP5Q13017 1502 aa25.69■■□□□ 1.7
VAT1-205ENST00000587173 LMTK3Q96Q04 1460 aa25.69■■□□□ 1.7
VAT1-205ENST00000587173 PLPPR3Q6T4P5 718 aa25.68■■□□□ 1.7
VAT1-205ENST00000587173 ATP10AO60312 1499 aa25.66■■□□□ 1.7
VAT1-205ENST00000587173 LRRIQ1Q96JM4 1722 aa25.66■■□□□ 1.7
VAT1-205ENST00000587173 C9orf84Q5VXU9 1444 aa25.66■■□□□ 1.7
VAT1-205ENST00000587173 CASKIN1Q8WXD9 1431 aa25.66■■□□□ 1.7
VAT1-205ENST00000587173 ZNF518AQ6AHZ1 1483 aa25.65■■□□□ 1.7
VAT1-205ENST00000587173 CCDC18Q5T9S5 1454 aa25.64■■□□□ 1.69
VAT1-205ENST00000587173 AFAP1Q8N556 730 aa25.62■■□□□ 1.69
VAT1-205ENST00000587173 KDM5CP41229 1560 aa25.59■■□□□ 1.69
VAT1-205ENST00000587173 MYT1LQ9UL68 1186 aa25.58■■□□□ 1.69
VAT1-205ENST00000587173 ARHGEF12Q9NZN5 1544 aa25.58■■□□□ 1.68
VAT1-205ENST00000587173 HSPA2P54652 639 aa25.57■■□□□ 1.68
VAT1-205ENST00000587173 FER1L4A9Z1Z3 1794 aa25.56■■□□□ 1.68
VAT1-205ENST00000587173 FYCO1Q9BQS8 1478 aa25.55■■□□□ 1.68
VAT1-205ENST00000587173 PREX2Q70Z35 1606 aa25.54■■□□□ 1.68
VAT1-205ENST00000587173 CDC42BPBQ9Y5S2 1711 aa25.54■■□□□ 1.68
VAT1-205ENST00000587173 FBXO41Q8TF61 875 aa25.52■■□□□ 1.68
VAT1-205ENST00000587173 ABCC1P33527 1531 aa25.52■■□□□ 1.68
VAT1-205ENST00000587173 TRAPPC8Q9Y2L5 1435 aa25.51■■□□□ 1.67
VAT1-205ENST00000587173 DIP2CQ9Y2E4 1556 aa25.51■■□□□ 1.67
VAT1-205ENST00000587173 MLH3Q9UHC1 1453 aa25.5■■□□□ 1.67
VAT1-205ENST00000587173 CEBPAP49715 358 aaPredicted RBP25.47■■□□□ 1.67
VAT1-205ENST00000587173 ABCA6Q8N139 1617 aa25.46■■□□□ 1.67
VAT1-205ENST00000587173 REREQ9P2R6 1566 aa25.46■■□□□ 1.67
VAT1-205ENST00000587173 ITSN2Q9NZM3 1697 aa25.44■■□□□ 1.66
VAT1-205ENST00000587173 ZNF777Q9ULD5 760 aaPredicted RBP25.42■■□□□ 1.66
VAT1-205ENST00000587173 CDC42BPAQ5VT25 1732 aa25.42■■□□□ 1.66
VAT1-205ENST00000587173 AGLP35573 1532 aa25.39■■□□□ 1.66
VAT1-205ENST00000587173 GPATCH8Q9UKJ3 1502 aaKnown RBP25.39■■□□□ 1.66
VAT1-205ENST00000587173 PREX1Q8TCU6 1659 aa25.37■■□□□ 1.65
VAT1-205ENST00000587173 SAMD9LQ8IVG5 1584 aa25.36■■□□□ 1.65
VAT1-205ENST00000587173 SYCP2Q9BX26 1530 aa25.36■■□□□ 1.65
VAT1-205ENST00000587173 KIDINS220Q9ULH0 1771 aa25.36■■□□□ 1.65
VAT1-205ENST00000587173 ESF1Q9H501 851 aaKnown RBP25.35■■□□□ 1.65
VAT1-205ENST00000587173 UHRF1BP1Q6BDS2 1440 aa25.35■■□□□ 1.65
VAT1-205ENST00000587173 MTUS2Q5JR59 1369 aa25.33■■□□□ 1.65
VAT1-205ENST00000587173 CCNB3Q8WWL7 1395 aa25.33■■□□□ 1.65
VAT1-205ENST00000587173 HNRNPMP52272 730 aaKnown RBP eCLIP25.33■■□□□ 1.65
VAT1-205ENST00000587173 CFDP1Q9UEE9 299 aaPredicted RBP25.32■■□□□ 1.64
VAT1-205ENST00000587173 SPAG9O60271 1321 aaKnown RBP25.32■■□□□ 1.64
VAT1-205ENST00000587173 KIAA1107Q9UPP5 1409 aa25.29■■□□□ 1.64
VAT1-205ENST00000587173 PLEKHH2Q8IVE3 1493 aa25.29■■□□□ 1.64
VAT1-205ENST00000587173 C3P01024 1663 aa25.27■■□□□ 1.64
VAT1-205ENST00000587173 CNTLNQ9NXG0 1405 aa25.27■■□□□ 1.64
VAT1-205ENST00000587173 CERKQ8TCT0 537 aa25.26■■□□□ 1.63
VAT1-205ENST00000587173 ATP7AQ04656 1500 aa25.24■■□□□ 1.63
VAT1-205ENST00000587173 CEP162Q5TB80 1403 aa25.23■■□□□ 1.63
VAT1-205ENST00000587173 DMRT2Q9Y5R5 561 aa25.23■■□□□ 1.63
VAT1-205ENST00000587173 EHBP1L1Q8N3D4 1523 aa25.22■■□□□ 1.63
VAT1-205ENST00000587173 INO80Q9ULG1 1556 aaPredicted RBP25.21■■□□□ 1.63
VAT1-205ENST00000587173 SETD1BQ9UPS6 1966 aaKnown RBP25.2■■□□□ 1.63
VAT1-205ENST00000587173 TIAM1Q13009 1591 aa25.2■■□□□ 1.62
VAT1-205ENST00000587173 A2MP01023 1474 aa25.2■■□□□ 1.62
VAT1-205ENST00000587173 STRCQ7RTU9 1775 aa25.18■■□□□ 1.62
VAT1-205ENST00000587173 ZNF644Q9H582 1327 aaPredicted RBP25.18■■□□□ 1.62
VAT1-205ENST00000587173 PLXNC1O60486 1568 aa25.17■■□□□ 1.62
VAT1-205ENST00000587173 SUPT6HQ7KZ85 1726 aaKnown RBP25.17■■□□□ 1.62
VAT1-205ENST00000587173 ZMYM3Q14202 1370 aa25.16■■□□□ 1.62
VAT1-205ENST00000587173 NPATQ14207 1427 aa25.14■■□□□ 1.62
VAT1-205ENST00000587173 MROH2AA6NES4 1674 aa25.13■■□□□ 1.61
VAT1-205ENST00000587173 MBD5Q9P267 1494 aa25.13■■□□□ 1.61
VAT1-205ENST00000587173 PTPRTO14522 1441 aa25.12■■□□□ 1.61
VAT1-205ENST00000587173 GGT6Q6P531 493 aa25.12■■□□□ 1.61
VAT1-205ENST00000587173 NCOA1Q15788 1441 aa25.09■■□□□ 1.61
VAT1-205ENST00000587173 RTEL1-TNFRSF6BF6WH68 1400 aa25.07■■□□□ 1.6
VAT1-205ENST00000587173 NCOA2Q15596 1464 aa25.07■■□□□ 1.6
VAT1-205ENST00000587173 CLTCQ00610 1675 aaKnown RBP25.07■■□□□ 1.6
VAT1-205ENST00000587173 ADGBQ8N7X0 1667 aa25.06■■□□□ 1.6
VAT1-205ENST00000587173 PPP6R1Q9UPN7 881 aa25.04■■□□□ 1.6
VAT1-205ENST00000587173 PTPRKQ15262 1439 aa25.03■■□□□ 1.6
VAT1-205ENST00000587173 CAMSAP1Q5T5Y3 1602 aa25.03■■□□□ 1.6
VAT1-205ENST00000587173 DHX29Q7Z478 1369 aaKnown RBP25.03■■□□□ 1.6
VAT1-205ENST00000587173 CAMSAP2Q08AD1 1489 aa25.02■■□□□ 1.6
VAT1-205ENST00000587173 CCDC141Q6ZP82 1450 aa25.02■■□□□ 1.6
VAT1-205ENST00000587173 MYO3AQ8NEV4 1616 aa24.98■■□□□ 1.59
VAT1-205ENST00000587173 LOC105371045A0A1W2PR82 267 aa24.98■■□□□ 1.59
VAT1-205ENST00000587173 RSPH4AQ5TD94 716 aa24.98■■□□□ 1.59
VAT1-205ENST00000587173 VPS8Q8N3P4 1428 aa24.97■■□□□ 1.59
VAT1-205ENST00000587173 NCKAP5LQ9HCH0 1330 aa24.97■■□□□ 1.59
VAT1-205ENST00000587173 LTBP4Q8N2S1 1624 aa24.96■■□□□ 1.59
VAT1-205ENST00000587173 KIF3BO15066 747 aa24.95■■□□□ 1.58
VAT1-205ENST00000587173 CEP170BQ9Y4F5 1589 aaPredicted RBP24.95■■□□□ 1.58
VAT1-205ENST00000587173 ZNF142P52746 1687 aaPredicted RBP24.94■■□□□ 1.58
VAT1-205ENST00000587173 PLA2R1Q13018 1463 aa24.94■■□□□ 1.58
VAT1-205ENST00000587173 LRRC9Q6ZRR7 1453 aa24.93■■□□□ 1.58
VAT1-205ENST00000587173 PKD2Q13563 968 aa24.91■■□□□ 1.58
VAT1-205ENST00000587173 ARHGEF5Q12774 1597 aa24.9■■□□□ 1.58
VAT1-205ENST00000587173 TSPY4P0CV99 314 aa24.9■■□□□ 1.58
VAT1-205ENST00000587173 TSPY10P0CW01 314 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms