RNA–Protein interactions for RNA: ENST00000587165.1

LINC01140-208, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 3

Gene LINC01140, Length 426 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-208ENST00000587165 CCNB3Q8WWL7 1395 aa8.09□□□□□ -1.12
LINC01140-208ENST00000587165 MAGI2Q86UL8 1455 aa8.08□□□□□ -1.12
LINC01140-208ENST00000587165 MYO5CQ9NQX4 1742 aa8.08□□□□□ -1.12
LINC01140-208ENST00000587165 ZNF518AQ6AHZ1 1483 aa8.07□□□□□ -1.12
LINC01140-208ENST00000587165 VPS8Q8N3P4 1428 aa8.07□□□□□ -1.12
LINC01140-208ENST00000587165 APLP2Q06481 763 aa8.07□□□□□ -1.12
LINC01140-208ENST00000587165 ZNF777Q9ULD5 760 aaPredicted RBP8.07□□□□□ -1.12
LINC01140-208ENST00000587165 ZFYVE16Q7Z3T8 1539 aa8.07□□□□□ -1.12
LINC01140-208ENST00000587165 ARHGEF40Q8TER5 1519 aa8.07□□□□□ -1.12
LINC01140-208ENST00000587165 CFDP1Q9UEE9 299 aaPredicted RBP8.06□□□□□ -1.12
LINC01140-208ENST00000587165 ZMYM4Q5VZL5 1548 aa8.06□□□□□ -1.12
LINC01140-208ENST00000587165 EHBP1L1Q8N3D4 1523 aa8.06□□□□□ -1.12
LINC01140-208ENST00000587165 PLEKHH2Q8IVE3 1493 aa8.06□□□□□ -1.12
LINC01140-208ENST00000587165 FRMPD1Q5SYB0 1578 aa8.05□□□□□ -1.12
LINC01140-208ENST00000587165 PREX2Q70Z35 1606 aa8.04□□□□□ -1.12
LINC01140-208ENST00000587165 C9orf84Q5VXU9 1444 aa8.03□□□□□ -1.12
LINC01140-208ENST00000587165 ATP10AO60312 1499 aa8.03□□□□□ -1.12
LINC01140-208ENST00000587165 AFAP1Q8N556 730 aa8.03□□□□□ -1.12
LINC01140-208ENST00000587165 RICTORQ6R327 1708 aa8.03□□□□□ -1.12
LINC01140-208ENST00000587165 LRRIQ1Q96JM4 1722 aa8.03□□□□□ -1.12
LINC01140-208ENST00000587165 GPATCH8Q9UKJ3 1502 aaKnown RBP8.03□□□□□ -1.12
LINC01140-208ENST00000587165 YEATS2Q9ULM3 1422 aa8.03□□□□□ -1.12
LINC01140-208ENST00000587165 ABCC1P33527 1531 aa8.02□□□□□ -1.13
LINC01140-208ENST00000587165 KIAA1107Q9UPP5 1409 aa8.02□□□□□ -1.13
LINC01140-208ENST00000587165 SPAG9O60271 1321 aaKnown RBP8.02□□□□□ -1.13
LINC01140-208ENST00000587165 MLECQ14165 292 aa8.01□□□□□ -1.13
LINC01140-208ENST00000587165 ESF1Q9H501 851 aaKnown RBP8.01□□□□□ -1.13
LINC01140-208ENST00000587165 KDM5CP41229 1560 aa8.01□□□□□ -1.13
LINC01140-208ENST00000587165 TIAM1Q13009 1591 aa8.01□□□□□ -1.13
LINC01140-208ENST00000587165 HECW2Q9P2P5 1572 aa8.01□□□□□ -1.13
LINC01140-208ENST00000587165 MLH3Q9UHC1 1453 aa8□□□□□ -1.13
LINC01140-208ENST00000587165 TRAPPC8Q9Y2L5 1435 aa8□□□□□ -1.13
LINC01140-208ENST00000587165 NCOA2Q15596 1464 aa8□□□□□ -1.13
LINC01140-208ENST00000587165 MAP3K1Q13233 1512 aa7.99□□□□□ -1.13
LINC01140-208ENST00000587165 SYCP2Q9BX26 1530 aa7.99□□□□□ -1.13
LINC01140-208ENST00000587165 HNRNPMP52272 730 aaKnown RBP eCLIP7.99□□□□□ -1.13
LINC01140-208ENST00000587165 RSPH4AQ5TD94 716 aa7.99□□□□□ -1.13
LINC01140-208ENST00000587165 SUPT6HQ7KZ85 1726 aaKnown RBP7.99□□□□□ -1.13
LINC01140-208ENST00000587165 LRRC9Q6ZRR7 1453 aa7.99□□□□□ -1.13
LINC01140-208ENST00000587165 ITSN2Q9NZM3 1697 aa7.98□□□□□ -1.13
LINC01140-208ENST00000587165 CDC42BPBQ9Y5S2 1711 aa7.98□□□□□ -1.13
LINC01140-208ENST00000587165 PTPRMP28827 1452 aa7.98□□□□□ -1.13
LINC01140-208ENST00000587165 ARHGEF12Q9NZN5 1544 aa7.98□□□□□ -1.13
LINC01140-208ENST00000587165 CDC42BPAQ5VT25 1732 aa7.98□□□□□ -1.13
LINC01140-208ENST00000587165 BCORL1Q5H9F3 1711 aa7.97□□□□□ -1.13
LINC01140-208ENST00000587165 SAMD9LQ8IVG5 1584 aa7.97□□□□□ -1.13
LINC01140-208ENST00000587165 ADAMTSL3P82987 1691 aa7.96□□□□□ -1.13
LINC01140-208ENST00000587165 TSPY4P0CV99 314 aa7.96□□□□□ -1.14
LINC01140-208ENST00000587165 TSPY10P0CW01 314 aa7.96□□□□□ -1.14
LINC01140-208ENST00000587165 PLPPR3Q6T4P5 718 aa7.96□□□□□ -1.14
LINC01140-208ENST00000587165 REREQ9P2R6 1566 aa7.96□□□□□ -1.14
LINC01140-208ENST00000587165 DIP2CQ9Y2E4 1556 aa7.96□□□□□ -1.14
LINC01140-208ENST00000587165 MADDQ8WXG6 1647 aa7.96□□□□□ -1.14
LINC01140-208ENST00000587165 CAMSAP2Q08AD1 1489 aa7.95□□□□□ -1.14
LINC01140-208ENST00000587165 CCDC141Q6ZP82 1450 aa7.95□□□□□ -1.14
LINC01140-208ENST00000587165 ATP7AQ04656 1500 aa7.95□□□□□ -1.14
LINC01140-208ENST00000587165 ZNF644Q9H582 1327 aaPredicted RBP7.95□□□□□ -1.14
LINC01140-208ENST00000587165 MYOM3Q5VTT5 1437 aa7.95□□□□□ -1.14
LINC01140-208ENST00000587165 CNTLNQ9NXG0 1405 aa7.95□□□□□ -1.14
LINC01140-208ENST00000587165 AGLP35573 1532 aa7.94□□□□□ -1.14
LINC01140-208ENST00000587165 RTEL1-TNFRSF6BF6WH68 1400 aa7.94□□□□□ -1.14
LINC01140-208ENST00000587165 MIA2Q96PC5 1412 aa7.94□□□□□ -1.14
LINC01140-208ENST00000587165 A2MP01023 1474 aa7.94□□□□□ -1.14
LINC01140-208ENST00000587165 ABCA6Q8N139 1617 aa7.93□□□□□ -1.14
LINC01140-208ENST00000587165 KANK4Q5T7N3 995 aaPredicted RBP7.93□□□□□ -1.14
LINC01140-208ENST00000587165 MBD5Q9P267 1494 aa7.93□□□□□ -1.14
LINC01140-208ENST00000587165 RIMS1Q86UR5 1692 aaKnown RBP7.92□□□□□ -1.14
LINC01140-208ENST00000587165 PPP6R1Q9UPN7 881 aa7.91□□□□□ -1.14
LINC01140-208ENST00000587165 INO80Q9ULG1 1556 aaPredicted RBP7.91□□□□□ -1.14
LINC01140-208ENST00000587165 FER1L4A9Z1Z3 1794 aa7.91□□□□□ -1.14
LINC01140-208ENST00000587165 KIDINS220Q9ULH0 1771 aa7.91□□□□□ -1.14
LINC01140-208ENST00000587165 ARHGEF5Q12774 1597 aa7.9□□□□□ -1.14
LINC01140-208ENST00000587165 DHX29Q7Z478 1369 aaKnown RBP7.9□□□□□ -1.14
LINC01140-208ENST00000587165 GGT6Q6P531 493 aa7.9□□□□□ -1.14
LINC01140-208ENST00000587165 UHRF1BP1Q6BDS2 1440 aa7.89□□□□□ -1.15
LINC01140-208ENST00000587165 FGD6Q6ZV73 1430 aa7.88□□□□□ -1.15
LINC01140-208ENST00000587165 KIF3BO15066 747 aa7.88□□□□□ -1.15
LINC01140-208ENST00000587165 CEBPAP49715 358 aaPredicted RBP7.88□□□□□ -1.15
LINC01140-208ENST00000587165 ADGBQ8N7X0 1667 aa7.88□□□□□ -1.15
LINC01140-208ENST00000587165 PLXNC1O60486 1568 aa7.88□□□□□ -1.15
LINC01140-208ENST00000587165 SIGLEC1Q9BZZ2 1709 aa7.87□□□□□ -1.15
LINC01140-208ENST00000587165 LMTK3Q96Q04 1460 aa7.87□□□□□ -1.15
LINC01140-208ENST00000587165 SHANK2Q9UPX8 1470 aa7.87□□□□□ -1.15
LINC01140-208ENST00000587165 ZMYM3Q14202 1370 aa7.86□□□□□ -1.15
LINC01140-208ENST00000587165 FAM50AQ14320 339 aaKnown RBP7.86□□□□□ -1.15
LINC01140-208ENST00000587165 FAM135AQ9P2D6 1515 aa7.86□□□□□ -1.15
LINC01140-208ENST00000587165 NPATQ14207 1427 aa7.86□□□□□ -1.15
LINC01140-208ENST00000587165 ANKRD30AQ9BXX3 1397 aa7.85□□□□□ -1.15
LINC01140-208ENST00000587165 KIF15Q9NS87 1388 aa7.85□□□□□ -1.15
LINC01140-208ENST00000587165 WASHC2CQ9Y4E1 1318 aa7.85□□□□□ -1.15
LINC01140-208ENST00000587165 HSPA2P54652 639 aa7.85□□□□□ -1.15
LINC01140-208ENST00000587165 DMRT2Q9Y5R5 561 aa7.85□□□□□ -1.15
LINC01140-208ENST00000587165 TCOF1Q13428 1488 aaKnown RBP7.85□□□□□ -1.15
LINC01140-208ENST00000587165 PTPN23Q9H3S7 1636 aa7.85□□□□□ -1.15
LINC01140-208ENST00000587165 MAST1Q9Y2H9 1570 aa7.84□□□□□ -1.15
LINC01140-208ENST00000587165 ABCC5O15440 1437 aa7.84□□□□□ -1.15
LINC01140-208ENST00000587165 DAPK1P53355 1430 aa7.84□□□□□ -1.15
LINC01140-208ENST00000587165 KDM5DQ9BY66 1539 aa7.83□□□□□ -1.16
LINC01140-208ENST00000587165 DUOX2Q9NRD8 1548 aa7.83□□□□□ -1.16
LINC01140-208ENST00000587165 SETD1BQ9UPS6 1966 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms