RNA–Protein interactions for RNA: ENST00000587019.5

CCDC130-206, Transcript of coiled-coil domain containing 130, humanhuman

TSL 3

Gene CCDC130, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-206ENST00000587019 ZFYVE16Q7Z3T8 1539 aa27.42■■□□□ 1.98
CCDC130-206ENST00000587019 HECW2Q9P2P5 1572 aa27.42■■□□□ 1.98
CCDC130-206ENST00000587019 SCAPERQ9BY12 1400 aa27.41■■□□□ 1.98
CCDC130-206ENST00000587019 MAGI2Q86UL8 1455 aa27.39■■□□□ 1.98
CCDC130-206ENST00000587019 ARHGAP5Q13017 1502 aa27.39■■□□□ 1.98
CCDC130-206ENST00000587019 EFCAB2Q5VUJ9 269 aa27.36■■□□□ 1.97
CCDC130-206ENST00000587019 MADDQ8WXG6 1647 aa27.36■■□□□ 1.97
CCDC130-206ENST00000587019 ARID4BQ4LE39 1312 aaPredicted RBP27.36■■□□□ 1.97
CCDC130-206ENST00000587019 YEATS2Q9ULM3 1422 aa27.35■■□□□ 1.97
CCDC130-206ENST00000587019 PREX2Q70Z35 1606 aa27.34■■□□□ 1.97
CCDC130-206ENST00000587019 PTPRMP28827 1452 aa27.34■■□□□ 1.97
CCDC130-206ENST00000587019 CDC42BPBQ9Y5S2 1711 aa27.31■■□□□ 1.96
CCDC130-206ENST00000587019 ZNF518AQ6AHZ1 1483 aa27.31■■□□□ 1.96
CCDC130-206ENST00000587019 SIGLEC1Q9BZZ2 1709 aa27.29■■□□□ 1.96
CCDC130-206ENST00000587019 KDM5CP41229 1560 aa27.28■■□□□ 1.96
CCDC130-206ENST00000587019 RIMS1Q86UR5 1692 aaKnown RBP27.27■■□□□ 1.96
CCDC130-206ENST00000587019 ABCC1P33527 1531 aa27.25■■□□□ 1.95
CCDC130-206ENST00000587019 CDC42BPAQ5VT25 1732 aa27.24■■□□□ 1.95
CCDC130-206ENST00000587019 C9orf84Q5VXU9 1444 aa27.23■■□□□ 1.95
CCDC130-206ENST00000587019 ATP10AO60312 1499 aa27.21■■□□□ 1.95
CCDC130-206ENST00000587019 ITSN2Q9NZM3 1697 aa27.21■■□□□ 1.95
CCDC130-206ENST00000587019 CEP162Q5TB80 1403 aa27.2■■□□□ 1.94
CCDC130-206ENST00000587019 FER1L4A9Z1Z3 1794 aa27.17■■□□□ 1.94
CCDC130-206ENST00000587019 DIP2CQ9Y2E4 1556 aa27.16■■□□□ 1.94
CCDC130-206ENST00000587019 AFAP1Q8N556 730 aa27.14■■□□□ 1.94
CCDC130-206ENST00000587019 ARHGEF12Q9NZN5 1544 aa27.14■■□□□ 1.94
CCDC130-206ENST00000587019 ABCA6Q8N139 1617 aa27.13■■□□□ 1.93
CCDC130-206ENST00000587019 MLH3Q9UHC1 1453 aa27.13■■□□□ 1.93
CCDC130-206ENST00000587019 TRAPPC8Q9Y2L5 1435 aa27.12■■□□□ 1.93
CCDC130-206ENST00000587019 REREQ9P2R6 1566 aa27.12■■□□□ 1.93
CCDC130-206ENST00000587019 SAMD9LQ8IVG5 1584 aa27.11■■□□□ 1.93
CCDC130-206ENST00000587019 GPATCH8Q9UKJ3 1502 aaKnown RBP27.11■■□□□ 1.93
CCDC130-206ENST00000587019 MTUS2Q5JR59 1369 aa27.1■■□□□ 1.93
CCDC130-206ENST00000587019 EHBP1L1Q8N3D4 1523 aa27.1■■□□□ 1.93
CCDC130-206ENST00000587019 MLECQ14165 292 aa27.09■■□□□ 1.93
CCDC130-206ENST00000587019 LMTK3Q96Q04 1460 aa27.07■■□□□ 1.92
CCDC130-206ENST00000587019 SYCP2Q9BX26 1530 aa27.07■■□□□ 1.92
CCDC130-206ENST00000587019 MYT1LQ9UL68 1186 aa27.07■■□□□ 1.92
CCDC130-206ENST00000587019 KIDINS220Q9ULH0 1771 aa27.04■■□□□ 1.92
CCDC130-206ENST00000587019 CCNB3Q8WWL7 1395 aa27.04■■□□□ 1.92
CCDC130-206ENST00000587019 PLEKHH2Q8IVE3 1493 aa27.02■■□□□ 1.92
CCDC130-206ENST00000587019 ZNF777Q9ULD5 760 aaPredicted RBP27.02■■□□□ 1.92
CCDC130-206ENST00000587019 TIAM1Q13009 1591 aa27.01■■□□□ 1.92
CCDC130-206ENST00000587019 AGLP35573 1532 aa27■■□□□ 1.91
CCDC130-206ENST00000587019 PLPPR3Q6T4P5 718 aa26.98■■□□□ 1.91
CCDC130-206ENST00000587019 CFDP1Q9UEE9 299 aaPredicted RBP26.98■■□□□ 1.91
CCDC130-206ENST00000587019 KIAA1107Q9UPP5 1409 aa26.98■■□□□ 1.91
CCDC130-206ENST00000587019 INO80Q9ULG1 1556 aaPredicted RBP26.95■■□□□ 1.9
CCDC130-206ENST00000587019 ATP7AQ04656 1500 aa26.94■■□□□ 1.9
CCDC130-206ENST00000587019 VPS8Q8N3P4 1428 aa26.91■■□□□ 1.9
CCDC130-206ENST00000587019 SUPT6HQ7KZ85 1726 aaKnown RBP26.91■■□□□ 1.9
CCDC130-206ENST00000587019 PREX1Q8TCU6 1659 aa26.91■■□□□ 1.9
CCDC130-206ENST00000587019 SPAG9O60271 1321 aaKnown RBP26.9■■□□□ 1.9
CCDC130-206ENST00000587019 HNRNPMP52272 730 aaKnown RBP eCLIP26.9■■□□□ 1.9
CCDC130-206ENST00000587019 NCOA2Q15596 1464 aa26.87■■□□□ 1.89
CCDC130-206ENST00000587019 LOC105371045A0A1W2PR82 267 aa26.87■■□□□ 1.89
CCDC130-206ENST00000587019 PLXNC1O60486 1568 aa26.86■■□□□ 1.89
CCDC130-206ENST00000587019 C3P01024 1663 aa26.85■■□□□ 1.89
CCDC130-206ENST00000587019 HSPA2P54652 639 aa26.84■■□□□ 1.89
CCDC130-206ENST00000587019 ILDR1Q86SU0 546 aaPredicted RBP26.84■■□□□ 1.89
CCDC130-206ENST00000587019 CEBPAP49715 358 aaPredicted RBP26.83■■□□□ 1.89
CCDC130-206ENST00000587019 CNTLNQ9NXG0 1405 aa26.82■■□□□ 1.88
CCDC130-206ENST00000587019 MBD5Q9P267 1494 aa26.81■■□□□ 1.88
CCDC130-206ENST00000587019 ZNF644Q9H582 1327 aaPredicted RBP26.81■■□□□ 1.88
CCDC130-206ENST00000587019 A2MP01023 1474 aa26.81■■□□□ 1.88
CCDC130-206ENST00000587019 ADGBQ8N7X0 1667 aa26.8■■□□□ 1.88
CCDC130-206ENST00000587019 ESF1Q9H501 851 aaKnown RBP26.8■■□□□ 1.88
CCDC130-206ENST00000587019 CAMSAP2Q08AD1 1489 aa26.79■■□□□ 1.88
CCDC130-206ENST00000587019 UHRF1BP1Q6BDS2 1440 aa26.78■■□□□ 1.88
CCDC130-206ENST00000587019 LRRC9Q6ZRR7 1453 aa26.78■■□□□ 1.88
CCDC130-206ENST00000587019 MROH2AA6NES4 1674 aa26.78■■□□□ 1.88
CCDC130-206ENST00000587019 MAP3K1Q13233 1512 aa26.75■■□□□ 1.87
CCDC130-206ENST00000587019 CCDC141Q6ZP82 1450 aa26.75■■□□□ 1.87
CCDC130-206ENST00000587019 RTEL1-TNFRSF6BF6WH68 1400 aa26.74■■□□□ 1.87
CCDC130-206ENST00000587019 SETD1BQ9UPS6 1966 aaKnown RBP26.74■■□□□ 1.87
CCDC130-206ENST00000587019 ARHGEF5Q12774 1597 aa26.69■■□□□ 1.86
CCDC130-206ENST00000587019 CLTCQ00610 1675 aaKnown RBP26.69■■□□□ 1.86
CCDC130-206ENST00000587019 NPATQ14207 1427 aa26.66■■□□□ 1.86
CCDC130-206ENST00000587019 RSPH4AQ5TD94 716 aa26.63■■□□□ 1.85
CCDC130-206ENST00000587019 ZMYM3Q14202 1370 aa26.62■■□□□ 1.85
CCDC130-206ENST00000587019 STRCQ7RTU9 1775 aa26.62■■□□□ 1.85
CCDC130-206ENST00000587019 DHX29Q7Z478 1369 aaKnown RBP26.61■■□□□ 1.85
CCDC130-206ENST00000587019 MYOM3Q5VTT5 1437 aa26.6■■□□□ 1.85
CCDC130-206ENST00000587019 KANK4Q5T7N3 995 aaPredicted RBP26.6■■□□□ 1.85
CCDC130-206ENST00000587019 GGT6Q6P531 493 aa26.6■■□□□ 1.85
CCDC130-206ENST00000587019 FBXO41Q8TF61 875 aa26.59■■□□□ 1.85
CCDC130-206ENST00000587019 MIA2Q96PC5 1412 aa26.57■■□□□ 1.84
CCDC130-206ENST00000587019 FAM135AQ9P2D6 1515 aa26.57■■□□□ 1.84
CCDC130-206ENST00000587019 PPP6R1Q9UPN7 881 aa26.57■■□□□ 1.84
CCDC130-206ENST00000587019 MAST1Q9Y2H9 1570 aa26.57■■□□□ 1.84
CCDC130-206ENST00000587019 MYO3AQ8NEV4 1616 aa26.57■■□□□ 1.84
CCDC130-206ENST00000587019 ZNF142P52746 1687 aaPredicted RBP26.55■■□□□ 1.84
CCDC130-206ENST00000587019 PTPRKQ15262 1439 aa26.54■■□□□ 1.84
CCDC130-206ENST00000587019 KDM5DQ9BY66 1539 aa26.53■■□□□ 1.84
CCDC130-206ENST00000587019 TSPY4P0CV99 314 aa26.52■■□□□ 1.84
CCDC130-206ENST00000587019 TSPY10P0CW01 314 aa26.52■■□□□ 1.84
CCDC130-206ENST00000587019 DMRT2Q9Y5R5 561 aa26.52■■□□□ 1.84
CCDC130-206ENST00000587019 NCOA1Q15788 1441 aa26.51■■□□□ 1.83
CCDC130-206ENST00000587019 KIF3BO15066 747 aa26.5■■□□□ 1.83
CCDC130-206ENST00000587019 APLP2Q06481 763 aa26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms