RNA–Protein interactions for RNA: ENST00000586967.1

CALR-204, Transcript of calreticulin, humanhuman

TSL 2

Gene CALR, Length 394 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-204ENST00000586967 MAP3K4Q9Y6R4 1608 aa22.48■■□□□ 1.19
CALR-204ENST00000586967 CFAP74Q9C0B2 1584 aa22.47■■□□□ 1.19
CALR-204ENST00000586967 CDC42BPBQ9Y5S2 1711 aa22.46■■□□□ 1.19
CALR-204ENST00000586967 TRIM26Q12899 539 aaPredicted RBP22.46■■□□□ 1.19
CALR-204ENST00000586967 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.46■■□□□ 1.19
CALR-204ENST00000586967 PTPN23Q9H3S7 1636 aa22.46■■□□□ 1.19
CALR-204ENST00000586967 EFCAB2Q5VUJ9 269 aa22.45■■□□□ 1.18
CALR-204ENST00000586967 KIF13AQ9H1H9 1805 aa22.44■■□□□ 1.18
CALR-204ENST00000586967 PLEKHH2Q8IVE3 1493 aa22.43■■□□□ 1.18
CALR-204ENST00000586967 TCOF1Q13428 1488 aaKnown RBP22.42■■□□□ 1.18
CALR-204ENST00000586967 TEX14Q8IWB6 1497 aa22.41■■□□□ 1.18
CALR-204ENST00000586967 FANCAO15360 1455 aa22.41■■□□□ 1.18
CALR-204ENST00000586967 FAM50AQ14320 339 aaKnown RBP22.39■■□□□ 1.17
CALR-204ENST00000586967 CAMSAP2Q08AD1 1489 aa22.39■■□□□ 1.17
CALR-204ENST00000586967 ZNF777Q9ULD5 760 aaPredicted RBP22.38■■□□□ 1.17
CALR-204ENST00000586967 NEO1Q92859 1461 aa22.38■■□□□ 1.17
CALR-204ENST00000586967 TRHP20396 242 aaPredicted RBP22.36■■□□□ 1.17
CALR-204ENST00000586967 RSPH4AQ5TD94 716 aa22.36■■□□□ 1.17
CALR-204ENST00000586967 KIAA1107Q9UPP5 1409 aa22.35■■□□□ 1.17
CALR-204ENST00000586967 SAMD9LQ8IVG5 1584 aa22.34■■□□□ 1.17
CALR-204ENST00000586967 TSPOAP1O95153 1857 aa22.32■■□□□ 1.16
CALR-204ENST00000586967 AKNAQ7Z591 1439 aa22.31■■□□□ 1.16
CALR-204ENST00000586967 ABCC1P33527 1531 aa22.31■■□□□ 1.16
CALR-204ENST00000586967 ARHGEF5Q12774 1597 aa22.3■■□□□ 1.16
CALR-204ENST00000586967 ADGRL1O94910 1474 aa22.3■■□□□ 1.16
CALR-204ENST00000586967 DNMT1P26358 1616 aaKnown RBP22.28■■□□□ 1.16
CALR-204ENST00000586967 PPRC1Q5VV67 1664 aaKnown RBP22.28■■□□□ 1.16
CALR-204ENST00000586967 ZNF644Q9H582 1327 aaPredicted RBP22.28■■□□□ 1.16
CALR-204ENST00000586967 SYCP2Q9BX26 1530 aa22.27■■□□□ 1.16
CALR-204ENST00000586967 CCDC141Q6ZP82 1450 aa22.26■■□□□ 1.15
CALR-204ENST00000586967 DAPK1P53355 1430 aa22.24■■□□□ 1.15
CALR-204ENST00000586967 SCAPERQ9BY12 1400 aa22.24■■□□□ 1.15
CALR-204ENST00000586967 TSPY4P0CV99 314 aa22.24■■□□□ 1.15
CALR-204ENST00000586967 TSPY10P0CW01 314 aa22.24■■□□□ 1.15
CALR-204ENST00000586967 MBD5Q9P267 1494 aa22.23■■□□□ 1.15
CALR-204ENST00000586967 SHANK2Q9UPX8 1470 aa22.22■■□□□ 1.15
CALR-204ENST00000586967 HNRNPMP52272 730 aaKnown RBP eCLIP22.22■■□□□ 1.15
CALR-204ENST00000586967 CROCC2H7BZ55 1655 aa22.22■■□□□ 1.15
CALR-204ENST00000586967 ZNF518AQ6AHZ1 1483 aa22.22■■□□□ 1.15
CALR-204ENST00000586967 DENND4BO75064 1496 aaPredicted RBP22.21■■□□□ 1.15
CALR-204ENST00000586967 ITGAEP38570 1179 aa22.2■■□□□ 1.14
CALR-204ENST00000586967 ABCC5O15440 1437 aa22.2■■□□□ 1.14
CALR-204ENST00000586967 ARHGEF12Q9NZN5 1544 aa22.17■■□□□ 1.14
CALR-204ENST00000586967 POGZQ7Z3K3 1410 aa22.17■■□□□ 1.14
CALR-204ENST00000586967 PCGF6Q9BYE7 350 aa22.17■■□□□ 1.14
CALR-204ENST00000586967 MAST1Q9Y2H9 1570 aa22.16■■□□□ 1.14
CALR-204ENST00000586967 ADGBQ8N7X0 1667 aa22.16■■□□□ 1.14
CALR-204ENST00000586967 C9orf84Q5VXU9 1444 aa22.15■■□□□ 1.14
CALR-204ENST00000586967 TRAPPC8Q9Y2L5 1435 aa22.14■■□□□ 1.14
CALR-204ENST00000586967 ROCK1Q13464 1354 aa22.14■■□□□ 1.14
CALR-204ENST00000586967 RTEL1-TNFRSF6BF6WH68 1400 aa22.14■■□□□ 1.13
CALR-204ENST00000586967 ANKRD30AQ9BXX3 1397 aa22.13■■□□□ 1.13
CALR-204ENST00000586967 SPAG9O60271 1321 aaKnown RBP22.13■■□□□ 1.13
CALR-204ENST00000586967 KDM5CP41229 1560 aa22.12■■□□□ 1.13
CALR-204ENST00000586967 ADGRL2O95490 1459 aa22.12■■□□□ 1.13
CALR-204ENST00000586967 RICTORQ6R327 1708 aa22.11■■□□□ 1.13
CALR-204ENST00000586967 AFAP1Q8N556 730 aa22.1■■□□□ 1.13
CALR-204ENST00000586967 PTPRKQ15262 1439 aa22.09■■□□□ 1.13
CALR-204ENST00000586967 MYT1LQ9UL68 1186 aa22.09■■□□□ 1.13
CALR-204ENST00000586967 MLH3Q9UHC1 1453 aa22.09■■□□□ 1.13
CALR-204ENST00000586967 PLXNC1O60486 1568 aa22.08■■□□□ 1.13
CALR-204ENST00000586967 HECW2Q9P2P5 1572 aa22.08■■□□□ 1.13
CALR-204ENST00000586967 CHIC2Q9UKJ5 165 aa22.08■■□□□ 1.13
CALR-204ENST00000586967 MAGI2Q86UL8 1455 aa22.08■■□□□ 1.12
CALR-204ENST00000586967 INO80Q9ULG1 1556 aaPredicted RBP22.08■■□□□ 1.12
CALR-204ENST00000586967 ACIN1Q9UKV3 1341 aaKnown RBP22.07■■□□□ 1.12
CALR-204ENST00000586967 ATP7AQ04656 1500 aa22.07■■□□□ 1.12
CALR-204ENST00000586967 ZMYM4Q5VZL5 1548 aa22.07■■□□□ 1.12
CALR-204ENST00000586967 ZFYVE16Q7Z3T8 1539 aa22.06■■□□□ 1.12
CALR-204ENST00000586967 KDM6BO15054 1643 aa22.06■■□□□ 1.12
CALR-204ENST00000586967 HFM1A2PYH4 1435 aa22.06■■□□□ 1.12
CALR-204ENST00000586967 NCOA1Q15788 1441 aa22.06■■□□□ 1.12
CALR-204ENST00000586967 RAPGEF3O95398 923 aa22.05■■□□□ 1.12
CALR-204ENST00000586967 GCC2Q8IWJ2 1684 aa22.04■■□□□ 1.12
CALR-204ENST00000586967 FRMPD1Q5SYB0 1578 aa22.04■■□□□ 1.12
CALR-204ENST00000586967 KIF15Q9NS87 1388 aa22.01■■□□□ 1.11
CALR-204ENST00000586967 SETD5Q9C0A6 1442 aa22.01■■□□□ 1.11
CALR-204ENST00000586967 KIDINS220Q9ULH0 1771 aa22.01■■□□□ 1.11
CALR-204ENST00000586967 RRP7BPQ9NSQ0 103 aa22■■□□□ 1.11
CALR-204ENST00000586967 DUOX2Q9NRD8 1548 aa22■■□□□ 1.11
CALR-204ENST00000586967 NAIPQ13075 1403 aa21.98■■□□□ 1.11
CALR-204ENST00000586967 COL17A1Q9UMD9 1497 aaPredicted RBP21.97■■□□□ 1.11
CALR-204ENST00000586967 HRCP23327 699 aa21.97■■□□□ 1.11
CALR-204ENST00000586967 ERBINQ96RT1 1412 aa21.96■■□□□ 1.11
CALR-204ENST00000586967 ANKRD50Q9ULJ7 1429 aa21.95■■□□□ 1.1
CALR-204ENST00000586967 ABCA6Q8N139 1617 aa21.93■■□□□ 1.1
CALR-204ENST00000586967 DIP2CQ9Y2E4 1556 aa21.92■■□□□ 1.1
CALR-204ENST00000586967 A2MP01023 1474 aa21.92■■□□□ 1.1
CALR-204ENST00000586967 ARHGEF40Q8TER5 1519 aa21.91■■□□□ 1.1
CALR-204ENST00000586967 DHX29Q7Z478 1369 aaKnown RBP21.91■■□□□ 1.1
CALR-204ENST00000586967 RAB3GAP2Q9H2M9 1393 aa21.91■■□□□ 1.1
CALR-204ENST00000586967 EIF2AK4Q9P2K8 1649 aaKnown RBP21.91■■□□□ 1.1
CALR-204ENST00000586967 ATP10AO60312 1499 aa21.9■■□□□ 1.1
CALR-204ENST00000586967 REREQ9P2R6 1566 aa21.9■■□□□ 1.1
CALR-204ENST00000586967 YEATS2Q9ULM3 1422 aa21.87■■□□□ 1.09
CALR-204ENST00000586967 BCORL1Q5H9F3 1711 aa21.84■■□□□ 1.09
CALR-204ENST00000586967 AGLP35573 1532 aa21.81■■□□□ 1.08
CALR-204ENST00000586967 UNC13BO14795 1591 aa21.79■■□□□ 1.08
CALR-204ENST00000586967 KIF3BO15066 747 aa21.79■■□□□ 1.08
CALR-204ENST00000586967 TRIM52Q96A61 297 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms