RNA–Protein interactions for RNA: ENST00000586963.1

CAPNS1-203, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-203ENST00000586963 HECW1Q76N89 1606 aa13.22□□□□□ -0.29
CAPNS1-203ENST00000586963 LMTK3Q96Q04 1460 aa13.22□□□□□ -0.29
CAPNS1-203ENST00000586963 PCF11O94913 1555 aaKnown RBP13.21□□□□□ -0.29
CAPNS1-203ENST00000586963 FBXO41Q8TF61 875 aa13.21□□□□□ -0.29
CAPNS1-203ENST00000586963 TROQ12816 1431 aaPredicted RBP13.21□□□□□ -0.3
CAPNS1-203ENST00000586963 ATP10AO60312 1499 aa13.19□□□□□ -0.3
CAPNS1-203ENST00000586963 MLECQ14165 292 aa13.18□□□□□ -0.3
CAPNS1-203ENST00000586963 CLIP1P30622 1438 aa13.18□□□□□ -0.3
CAPNS1-203ENST00000586963 RIMS1Q86UR5 1692 aaKnown RBP13.18□□□□□ -0.3
CAPNS1-203ENST00000586963 C9orf84Q5VXU9 1444 aa13.16□□□□□ -0.3
CAPNS1-203ENST00000586963 AFAP1Q8N556 730 aa13.16□□□□□ -0.3
CAPNS1-203ENST00000586963 ZNF518AQ6AHZ1 1483 aa13.16□□□□□ -0.3
CAPNS1-203ENST00000586963 KIF14Q15058 1648 aa13.15□□□□□ -0.3
CAPNS1-203ENST00000586963 HSPA2P54652 639 aa13.15□□□□□ -0.3
CAPNS1-203ENST00000586963 SIGLEC1Q9BZZ2 1709 aa13.15□□□□□ -0.3
CAPNS1-203ENST00000586963 MYO5CQ9NQX4 1742 aa13.14□□□□□ -0.31
CAPNS1-203ENST00000586963 PLPPR3Q6T4P5 718 aa13.14□□□□□ -0.31
CAPNS1-203ENST00000586963 CASKIN1Q8WXD9 1431 aa13.13□□□□□ -0.31
CAPNS1-203ENST00000586963 ARHGAP5Q13017 1502 aa13.13□□□□□ -0.31
CAPNS1-203ENST00000586963 ARHGEF12Q9NZN5 1544 aa13.13□□□□□ -0.31
CAPNS1-203ENST00000586963 KDM5CP41229 1560 aa13.11□□□□□ -0.31
CAPNS1-203ENST00000586963 CCDC18Q5T9S5 1454 aa13.11□□□□□ -0.31
CAPNS1-203ENST00000586963 MYT1LQ9UL68 1186 aa13.11□□□□□ -0.31
CAPNS1-203ENST00000586963 MLH3Q9UHC1 1453 aa13.1□□□□□ -0.31
CAPNS1-203ENST00000586963 CEBPAP49715 358 aaPredicted RBP13.09□□□□□ -0.31
CAPNS1-203ENST00000586963 FER1L4A9Z1Z3 1794 aa13.09□□□□□ -0.31
CAPNS1-203ENST00000586963 LRRIQ1Q96JM4 1722 aa13.08□□□□□ -0.32
CAPNS1-203ENST00000586963 REREQ9P2R6 1566 aa13.07□□□□□ -0.32
CAPNS1-203ENST00000586963 TRAPPC8Q9Y2L5 1435 aa13.07□□□□□ -0.32
CAPNS1-203ENST00000586963 FYCO1Q9BQS8 1478 aa13.06□□□□□ -0.32
CAPNS1-203ENST00000586963 DIP2CQ9Y2E4 1556 aa13.06□□□□□ -0.32
CAPNS1-203ENST00000586963 CDC42BPBQ9Y5S2 1711 aa13.05□□□□□ -0.32
CAPNS1-203ENST00000586963 AGLP35573 1532 aa13.05□□□□□ -0.32
CAPNS1-203ENST00000586963 CERKQ8TCT0 537 aa13.05□□□□□ -0.32
CAPNS1-203ENST00000586963 ABCC1P33527 1531 aa13.04□□□□□ -0.32
CAPNS1-203ENST00000586963 PREX2Q70Z35 1606 aa13.04□□□□□ -0.32
CAPNS1-203ENST00000586963 DMRT2Q9Y5R5 561 aa13.04□□□□□ -0.32
CAPNS1-203ENST00000586963 ESF1Q9H501 851 aaKnown RBP13.03□□□□□ -0.32
CAPNS1-203ENST00000586963 UHRF1BP1Q6BDS2 1440 aa13.03□□□□□ -0.32
CAPNS1-203ENST00000586963 ABCA6Q8N139 1617 aa13.02□□□□□ -0.33
CAPNS1-203ENST00000586963 SETD1BQ9UPS6 1966 aaKnown RBP13.01□□□□□ -0.33
CAPNS1-203ENST00000586963 ZNF777Q9ULD5 760 aaPredicted RBP13.01□□□□□ -0.33
CAPNS1-203ENST00000586963 GPATCH8Q9UKJ3 1502 aaKnown RBP13.01□□□□□ -0.33
CAPNS1-203ENST00000586963 PREX1Q8TCU6 1659 aa13.01□□□□□ -0.33
CAPNS1-203ENST00000586963 CNTLNQ9NXG0 1405 aa13□□□□□ -0.33
CAPNS1-203ENST00000586963 ITSN2Q9NZM3 1697 aa12.99□□□□□ -0.33
CAPNS1-203ENST00000586963 KIAA1107Q9UPP5 1409 aa12.99□□□□□ -0.33
CAPNS1-203ENST00000586963 SPAG9O60271 1321 aaKnown RBP12.99□□□□□ -0.33
CAPNS1-203ENST00000586963 HNRNPMP52272 730 aaKnown RBP eCLIP12.99□□□□□ -0.33
CAPNS1-203ENST00000586963 CFDP1Q9UEE9 299 aaPredicted RBP12.99□□□□□ -0.33
CAPNS1-203ENST00000586963 KIDINS220Q9ULH0 1771 aa12.98□□□□□ -0.33
CAPNS1-203ENST00000586963 CDC42BPAQ5VT25 1732 aa12.98□□□□□ -0.33
CAPNS1-203ENST00000586963 SAMD9LQ8IVG5 1584 aa12.98□□□□□ -0.33
CAPNS1-203ENST00000586963 PLEKHH2Q8IVE3 1493 aa12.97□□□□□ -0.33
CAPNS1-203ENST00000586963 CCNB3Q8WWL7 1395 aa12.96□□□□□ -0.33
CAPNS1-203ENST00000586963 PTPRTO14522 1441 aa12.96□□□□□ -0.34
CAPNS1-203ENST00000586963 MTUS2Q5JR59 1369 aa12.95□□□□□ -0.34
CAPNS1-203ENST00000586963 SYCP2Q9BX26 1530 aa12.95□□□□□ -0.34
CAPNS1-203ENST00000586963 C3P01024 1663 aa12.95□□□□□ -0.34
CAPNS1-203ENST00000586963 ZMYM3Q14202 1370 aa12.94□□□□□ -0.34
CAPNS1-203ENST00000586963 NPATQ14207 1427 aa12.94□□□□□ -0.34
CAPNS1-203ENST00000586963 STRCQ7RTU9 1775 aa12.94□□□□□ -0.34
CAPNS1-203ENST00000586963 PPP6R1Q9UPN7 881 aa12.93□□□□□ -0.34
CAPNS1-203ENST00000586963 A2MP01023 1474 aa12.91□□□□□ -0.34
CAPNS1-203ENST00000586963 ATP7AQ04656 1500 aa12.91□□□□□ -0.34
CAPNS1-203ENST00000586963 NCOA1Q15788 1441 aa12.9□□□□□ -0.34
CAPNS1-203ENST00000586963 ZNF644Q9H582 1327 aaPredicted RBP12.89□□□□□ -0.35
CAPNS1-203ENST00000586963 GGT6Q6P531 493 aa12.89□□□□□ -0.35
CAPNS1-203ENST00000586963 PLXNC1O60486 1568 aa12.89□□□□□ -0.35
CAPNS1-203ENST00000586963 INO80Q9ULG1 1556 aaPredicted RBP12.89□□□□□ -0.35
CAPNS1-203ENST00000586963 MROH2AA6NES4 1674 aa12.89□□□□□ -0.35
CAPNS1-203ENST00000586963 CEP162Q5TB80 1403 aa12.88□□□□□ -0.35
CAPNS1-203ENST00000586963 MBD5Q9P267 1494 aa12.88□□□□□ -0.35
CAPNS1-203ENST00000586963 RTEL1-TNFRSF6BF6WH68 1400 aa12.88□□□□□ -0.35
CAPNS1-203ENST00000586963 EHBP1L1Q8N3D4 1523 aa12.87□□□□□ -0.35
CAPNS1-203ENST00000586963 DHX29Q7Z478 1369 aaKnown RBP12.86□□□□□ -0.35
CAPNS1-203ENST00000586963 SUPT6HQ7KZ85 1726 aaKnown RBP12.86□□□□□ -0.35
CAPNS1-203ENST00000586963 RSPH4AQ5TD94 716 aa12.86□□□□□ -0.35
CAPNS1-203ENST00000586963 PTPRKQ15262 1439 aa12.86□□□□□ -0.35
CAPNS1-203ENST00000586963 TIAM1Q13009 1591 aa12.86□□□□□ -0.35
CAPNS1-203ENST00000586963 PKD2Q13563 968 aa12.85□□□□□ -0.35
CAPNS1-203ENST00000586963 CAMSAP1Q5T5Y3 1602 aa12.84□□□□□ -0.35
CAPNS1-203ENST00000586963 LTBP4Q8N2S1 1624 aa12.84□□□□□ -0.35
CAPNS1-203ENST00000586963 NCKAP5LQ9HCH0 1330 aa12.84□□□□□ -0.35
CAPNS1-203ENST00000586963 IQSEC2Q5JU85 1478 aa12.84□□□□□ -0.35
CAPNS1-203ENST00000586963 PLA2R1Q13018 1463 aa12.83□□□□□ -0.36
CAPNS1-203ENST00000586963 CLTCQ00610 1675 aaKnown RBP12.82□□□□□ -0.36
CAPNS1-203ENST00000586963 ADGBQ8N7X0 1667 aa12.82□□□□□ -0.36
CAPNS1-203ENST00000586963 TCOF1Q13428 1488 aaKnown RBP12.8□□□□□ -0.36
CAPNS1-203ENST00000586963 NCOA2Q15596 1464 aa12.8□□□□□ -0.36
CAPNS1-203ENST00000586963 CCDC141Q6ZP82 1450 aa12.8□□□□□ -0.36
CAPNS1-203ENST00000586963 KIF3BO15066 747 aa12.8□□□□□ -0.36
CAPNS1-203ENST00000586963 CEP170BQ9Y4F5 1589 aaPredicted RBP12.79□□□□□ -0.36
CAPNS1-203ENST00000586963 TSPY4P0CV99 314 aa12.79□□□□□ -0.36
CAPNS1-203ENST00000586963 TSPY10P0CW01 314 aa12.79□□□□□ -0.36
CAPNS1-203ENST00000586963 ZNF335Q9H4Z2 1342 aaPredicted RBP12.79□□□□□ -0.36
CAPNS1-203ENST00000586963 MYO3AQ8NEV4 1616 aa12.78□□□□□ -0.36
CAPNS1-203ENST00000586963 ZNF142P52746 1687 aaPredicted RBP12.78□□□□□ -0.36
CAPNS1-203ENST00000586963 A2ML1A8K2U0 1454 aa12.78□□□□□ -0.36
CAPNS1-203ENST00000586963 CAMSAP2Q08AD1 1489 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms