RNA–Protein interactions for RNA: ENST00000586555.2

CIRBP-209, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-209ENST00000586555 PCF11O94913 1555 aaKnown RBP33.08■■■□□ 2.89
CIRBP-209ENST00000586555 MAGI2Q86UL8 1455 aa33.07■■■□□ 2.88
CIRBP-209ENST00000586555 KIF14Q15058 1648 aa33.07■■■□□ 2.88
CIRBP-209ENST00000586555 EFCAB2Q5VUJ9 269 aa33.07■■■□□ 2.88
CIRBP-209ENST00000586555 FYCO1Q9BQS8 1478 aa33.06■■■□□ 2.88
CIRBP-209ENST00000586555 CEP162Q5TB80 1403 aa33.05■■■□□ 2.88
CIRBP-209ENST00000586555 YEATS2Q9ULM3 1422 aa33.04■■■□□ 2.88
CIRBP-209ENST00000586555 POGZQ7Z3K3 1410 aa33.03■■■□□ 2.88
CIRBP-209ENST00000586555 ZFYVE16Q7Z3T8 1539 aa33.02■■■□□ 2.88
CIRBP-209ENST00000586555 MADDQ8WXG6 1647 aa33.02■■■□□ 2.88
CIRBP-209ENST00000586555 LOC105371045A0A1W2PR82 267 aa33.02■■■□□ 2.88
CIRBP-209ENST00000586555 SIGLEC1Q9BZZ2 1709 aa32.97■■■□□ 2.87
CIRBP-209ENST00000586555 ARHGAP5Q13017 1502 aa32.92■■■□□ 2.86
CIRBP-209ENST00000586555 CDC42BPBQ9Y5S2 1711 aa32.91■■■□□ 2.86
CIRBP-209ENST00000586555 RIMS1Q86UR5 1692 aaKnown RBP32.9■■■□□ 2.86
CIRBP-209ENST00000586555 ATP10AO60312 1499 aa32.88■■■□□ 2.85
CIRBP-209ENST00000586555 ZNF518AQ6AHZ1 1483 aa32.86■■■□□ 2.85
CIRBP-209ENST00000586555 KDM5CP41229 1560 aa32.85■■■□□ 2.85
CIRBP-209ENST00000586555 AFAP1Q8N556 730 aa32.85■■■□□ 2.85
CIRBP-209ENST00000586555 ILDR1Q86SU0 546 aaPredicted RBP32.84■■■□□ 2.85
CIRBP-209ENST00000586555 PREX2Q70Z35 1606 aa32.83■■■□□ 2.85
CIRBP-209ENST00000586555 C9orf84Q5VXU9 1444 aa32.82■■■□□ 2.84
CIRBP-209ENST00000586555 MLECQ14165 292 aa32.79■■■□□ 2.84
CIRBP-209ENST00000586555 LMTK3Q96Q04 1460 aa32.78■■■□□ 2.84
CIRBP-209ENST00000586555 CDC42BPAQ5VT25 1732 aa32.76■■■□□ 2.83
CIRBP-209ENST00000586555 ARHGEF12Q9NZN5 1544 aa32.76■■■□□ 2.83
CIRBP-209ENST00000586555 FER1L4A9Z1Z3 1794 aa32.75■■■□□ 2.83
CIRBP-209ENST00000586555 MLH3Q9UHC1 1453 aa32.74■■■□□ 2.83
CIRBP-209ENST00000586555 MTUS2Q5JR59 1369 aa32.74■■■□□ 2.83
CIRBP-209ENST00000586555 ABCC1P33527 1531 aa32.73■■■□□ 2.83
CIRBP-209ENST00000586555 TRAPPC8Q9Y2L5 1435 aa32.72■■■□□ 2.83
CIRBP-209ENST00000586555 DIP2CQ9Y2E4 1556 aa32.7■■■□□ 2.82
CIRBP-209ENST00000586555 ITSN2Q9NZM3 1697 aa32.69■■■□□ 2.82
CIRBP-209ENST00000586555 VPS8Q8N3P4 1428 aa32.68■■■□□ 2.82
CIRBP-209ENST00000586555 REREQ9P2R6 1566 aa32.68■■■□□ 2.82
CIRBP-209ENST00000586555 GPATCH8Q9UKJ3 1502 aaKnown RBP32.67■■■□□ 2.82
CIRBP-209ENST00000586555 PLPPR3Q6T4P5 718 aa32.65■■■□□ 2.82
CIRBP-209ENST00000586555 MYT1LQ9UL68 1186 aa32.65■■■□□ 2.82
CIRBP-209ENST00000586555 ABCA6Q8N139 1617 aa32.65■■■□□ 2.82
CIRBP-209ENST00000586555 EHBP1L1Q8N3D4 1523 aa32.61■■■□□ 2.81
CIRBP-209ENST00000586555 KIDINS220Q9ULH0 1771 aa32.6■■■□□ 2.81
CIRBP-209ENST00000586555 SAMD9LQ8IVG5 1584 aa32.59■■■□□ 2.81
CIRBP-209ENST00000586555 CCNB3Q8WWL7 1395 aa32.58■■■□□ 2.81
CIRBP-209ENST00000586555 AGLP35573 1532 aa32.58■■■□□ 2.81
CIRBP-209ENST00000586555 HSPA2P54652 639 aa32.58■■■□□ 2.81
CIRBP-209ENST00000586555 ZNF777Q9ULD5 760 aaPredicted RBP32.57■■■□□ 2.8
CIRBP-209ENST00000586555 CEBPAP49715 358 aaPredicted RBP32.54■■■□□ 2.8
CIRBP-209ENST00000586555 SETD1BQ9UPS6 1966 aaKnown RBP32.53■■■□□ 2.8
CIRBP-209ENST00000586555 CFDP1Q9UEE9 299 aaPredicted RBP32.53■■■□□ 2.8
CIRBP-209ENST00000586555 TIAM1Q13009 1591 aa32.53■■■□□ 2.8
CIRBP-209ENST00000586555 KIAA1107Q9UPP5 1409 aa32.52■■■□□ 2.8
CIRBP-209ENST00000586555 SYCP2Q9BX26 1530 aa32.51■■■□□ 2.8
CIRBP-209ENST00000586555 HNRNPMP52272 730 aaKnown RBP eCLIP32.51■■■□□ 2.79
CIRBP-209ENST00000586555 PLEKHH2Q8IVE3 1493 aa32.48■■■□□ 2.79
CIRBP-209ENST00000586555 APLP2Q06481 763 aa32.47■■■□□ 2.79
CIRBP-209ENST00000586555 PREX1Q8TCU6 1659 aa32.46■■■□□ 2.79
CIRBP-209ENST00000586555 SPAG9O60271 1321 aaKnown RBP32.46■■■□□ 2.79
CIRBP-209ENST00000586555 MAP3K1Q13233 1512 aa32.46■■■□□ 2.79
CIRBP-209ENST00000586555 SUPT6HQ7KZ85 1726 aaKnown RBP32.46■■■□□ 2.79
CIRBP-209ENST00000586555 FBXO41Q8TF61 875 aa32.41■■■□□ 2.78
CIRBP-209ENST00000586555 LRRC9Q6ZRR7 1453 aa32.41■■■□□ 2.78
CIRBP-209ENST00000586555 C3P01024 1663 aa32.4■■■□□ 2.78
CIRBP-209ENST00000586555 NCOA2Q15596 1464 aa32.39■■■□□ 2.78
CIRBP-209ENST00000586555 ATP7AQ04656 1500 aa32.38■■■□□ 2.77
CIRBP-209ENST00000586555 INO80Q9ULG1 1556 aaPredicted RBP32.37■■■□□ 2.77
CIRBP-209ENST00000586555 ZNF644Q9H582 1327 aaPredicted RBP32.36■■■□□ 2.77
CIRBP-209ENST00000586555 ESF1Q9H501 851 aaKnown RBP32.36■■■□□ 2.77
CIRBP-209ENST00000586555 CNTLNQ9NXG0 1405 aa32.35■■■□□ 2.77
CIRBP-209ENST00000586555 MBD5Q9P267 1494 aa32.34■■■□□ 2.77
CIRBP-209ENST00000586555 UHRF1BP1Q6BDS2 1440 aa32.34■■■□□ 2.77
CIRBP-209ENST00000586555 PLXNC1O60486 1568 aa32.32■■■□□ 2.76
CIRBP-209ENST00000586555 A2MP01023 1474 aa32.3■■■□□ 2.76
CIRBP-209ENST00000586555 KANK4Q5T7N3 995 aaPredicted RBP32.3■■■□□ 2.76
CIRBP-209ENST00000586555 STRCQ7RTU9 1775 aa32.27■■■□□ 2.76
CIRBP-209ENST00000586555 MROH2AA6NES4 1674 aa32.27■■■□□ 2.76
CIRBP-209ENST00000586555 RTEL1-TNFRSF6BF6WH68 1400 aa32.25■■■□□ 2.75
CIRBP-209ENST00000586555 ZMYM3Q14202 1370 aa32.23■■■□□ 2.75
CIRBP-209ENST00000586555 ADGBQ8N7X0 1667 aa32.23■■■□□ 2.75
CIRBP-209ENST00000586555 RSPH4AQ5TD94 716 aa32.22■■■□□ 2.75
CIRBP-209ENST00000586555 DMRT2Q9Y5R5 561 aa32.2■■■□□ 2.75
CIRBP-209ENST00000586555 NPATQ14207 1427 aa32.19■■■□□ 2.74
CIRBP-209ENST00000586555 CAMSAP2Q08AD1 1489 aa32.17■■■□□ 2.74
CIRBP-209ENST00000586555 CERKQ8TCT0 537 aa32.17■■■□□ 2.74
CIRBP-209ENST00000586555 PPP6R1Q9UPN7 881 aa32.17■■■□□ 2.74
CIRBP-209ENST00000586555 GGT6Q6P531 493 aa32.16■■■□□ 2.74
CIRBP-209ENST00000586555 CLTCQ00610 1675 aaKnown RBP32.15■■■□□ 2.74
CIRBP-209ENST00000586555 DHX29Q7Z478 1369 aaKnown RBP32.14■■■□□ 2.74
CIRBP-209ENST00000586555 MYOM3Q5VTT5 1437 aa32.13■■■□□ 2.73
CIRBP-209ENST00000586555 CCDC141Q6ZP82 1450 aa32.13■■■□□ 2.73
CIRBP-209ENST00000586555 MIA2Q96PC5 1412 aa32.12■■■□□ 2.73
CIRBP-209ENST00000586555 PTPRTO14522 1441 aa32.1■■■□□ 2.73
CIRBP-209ENST00000586555 TSPY4P0CV99 314 aa32.08■■■□□ 2.73
CIRBP-209ENST00000586555 TSPY10P0CW01 314 aa32.08■■■□□ 2.73
CIRBP-209ENST00000586555 PTPRKQ15262 1439 aa32.08■■■□□ 2.73
CIRBP-209ENST00000586555 ARHGEF5Q12774 1597 aa32.07■■■□□ 2.72
CIRBP-209ENST00000586555 NCOA1Q15788 1441 aa32.06■■■□□ 2.72
CIRBP-209ENST00000586555 KIF3BO15066 747 aa32■■■□□ 2.71
CIRBP-209ENST00000586555 CAMSAP1Q5T5Y3 1602 aa31.99■■■□□ 2.71
CIRBP-209ENST00000586555 ZNF142P52746 1687 aaPredicted RBP31.98■■■□□ 2.71
CIRBP-209ENST00000586555 MYO3AQ8NEV4 1616 aa31.97■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms