RNA–Protein interactions for RNA: ENST00000586375.1

RAD23A-202, Transcript of RAD23 homolog A, nucleotide excision repair protein, humanhuman

TSL 3

Gene RAD23A, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23A-202ENST00000586375 MADDQ8WXG6 1647 aa25.41■■□□□ 1.66
RAD23A-202ENST00000586375 BCORL1Q5H9F3 1711 aa25.4■■□□□ 1.66
RAD23A-202ENST00000586375 CFAP74Q9C0B2 1584 aa25.39■■□□□ 1.66
RAD23A-202ENST00000586375 MYO5CQ9NQX4 1742 aa25.39■■□□□ 1.65
RAD23A-202ENST00000586375 PLCH2O75038 1416 aa25.38■■□□□ 1.65
RAD23A-202ENST00000586375 TROQ12816 1431 aaPredicted RBP25.37■■□□□ 1.65
RAD23A-202ENST00000586375 ZMYM4Q5VZL5 1548 aa25.35■■□□□ 1.65
RAD23A-202ENST00000586375 SCAPERQ9BY12 1400 aa25.35■■□□□ 1.65
RAD23A-202ENST00000586375 CASKIN1Q8WXD9 1431 aa25.33■■□□□ 1.65
RAD23A-202ENST00000586375 PTPRMP28827 1452 aa25.33■■□□□ 1.65
RAD23A-202ENST00000586375 CDC42BPBQ9Y5S2 1711 aa25.32■■□□□ 1.64
RAD23A-202ENST00000586375 POGZQ7Z3K3 1410 aa25.32■■□□□ 1.64
RAD23A-202ENST00000586375 ARID4BQ4LE39 1312 aaPredicted RBP25.32■■□□□ 1.64
RAD23A-202ENST00000586375 ZFYVE16Q7Z3T8 1539 aa25.32■■□□□ 1.64
RAD23A-202ENST00000586375 CLIP1P30622 1438 aa25.31■■□□□ 1.64
RAD23A-202ENST00000586375 RIMS1Q86UR5 1692 aaKnown RBP25.31■■□□□ 1.64
RAD23A-202ENST00000586375 ARHGAP5Q13017 1502 aa25.28■■□□□ 1.64
RAD23A-202ENST00000586375 ARHGEF12Q9NZN5 1544 aa25.26■■□□□ 1.63
RAD23A-202ENST00000586375 PREX2Q70Z35 1606 aa25.23■■□□□ 1.63
RAD23A-202ENST00000586375 MLECQ14165 292 aa25.23■■□□□ 1.63
RAD23A-202ENST00000586375 CDC42BPAQ5VT25 1732 aa25.23■■□□□ 1.63
RAD23A-202ENST00000586375 FYCO1Q9BQS8 1478 aa25.22■■□□□ 1.63
RAD23A-202ENST00000586375 AFAP1Q8N556 730 aa25.21■■□□□ 1.63
RAD23A-202ENST00000586375 EFCAB2Q5VUJ9 269 aa25.2■■□□□ 1.62
RAD23A-202ENST00000586375 CCDC18Q5T9S5 1454 aa25.2■■□□□ 1.62
RAD23A-202ENST00000586375 CDK11AQ9UQ88 783 aaPredicted RBP25.19■■□□□ 1.62
RAD23A-202ENST00000586375 TRAPPC8Q9Y2L5 1435 aa25.19■■□□□ 1.62
RAD23A-202ENST00000586375 KDM5CP41229 1560 aa25.17■■□□□ 1.62
RAD23A-202ENST00000586375 ABCC1P33527 1531 aa25.17■■□□□ 1.62
RAD23A-202ENST00000586375 ITSN2Q9NZM3 1697 aa25.16■■□□□ 1.62
RAD23A-202ENST00000586375 ABCA6Q8N139 1617 aa25.15■■□□□ 1.62
RAD23A-202ENST00000586375 DIP2CQ9Y2E4 1556 aa25.14■■□□□ 1.62
RAD23A-202ENST00000586375 MAGI2Q86UL8 1455 aa25.14■■□□□ 1.61
RAD23A-202ENST00000586375 FER1L4A9Z1Z3 1794 aa25.13■■□□□ 1.61
RAD23A-202ENST00000586375 SAMD9LQ8IVG5 1584 aa25.13■■□□□ 1.61
RAD23A-202ENST00000586375 LMTK3Q96Q04 1460 aa25.12■■□□□ 1.61
RAD23A-202ENST00000586375 ATP10AO60312 1499 aa25.11■■□□□ 1.61
RAD23A-202ENST00000586375 CEP162Q5TB80 1403 aa25.11■■□□□ 1.61
RAD23A-202ENST00000586375 ZNF518AQ6AHZ1 1483 aa25.1■■□□□ 1.61
RAD23A-202ENST00000586375 LOC105371045A0A1W2PR82 267 aa25.1■■□□□ 1.61
RAD23A-202ENST00000586375 C9orf84Q5VXU9 1444 aa25.1■■□□□ 1.61
RAD23A-202ENST00000586375 ILDR1Q86SU0 546 aaPredicted RBP25.09■■□□□ 1.61
RAD23A-202ENST00000586375 GPATCH8Q9UKJ3 1502 aaKnown RBP25.08■■□□□ 1.61
RAD23A-202ENST00000586375 KIDINS220Q9ULH0 1771 aa25.06■■□□□ 1.6
RAD23A-202ENST00000586375 HSPA2P54652 639 aa25.06■■□□□ 1.6
RAD23A-202ENST00000586375 ZNF777Q9ULD5 760 aaPredicted RBP25.06■■□□□ 1.6
RAD23A-202ENST00000586375 SYCP2Q9BX26 1530 aa25.06■■□□□ 1.6
RAD23A-202ENST00000586375 CEBPAP49715 358 aaPredicted RBP25.04■■□□□ 1.6
RAD23A-202ENST00000586375 MYT1LQ9UL68 1186 aa25.01■■□□□ 1.59
RAD23A-202ENST00000586375 TIAM1Q13009 1591 aa25■■□□□ 1.59
RAD23A-202ENST00000586375 HNRNPMP52272 730 aaKnown RBP eCLIP24.99■■□□□ 1.59
RAD23A-202ENST00000586375 MLH3Q9UHC1 1453 aa24.99■■□□□ 1.59
RAD23A-202ENST00000586375 ZNF644Q9H582 1327 aaPredicted RBP24.98■■□□□ 1.59
RAD23A-202ENST00000586375 MTUS2Q5JR59 1369 aa24.94■■□□□ 1.58
RAD23A-202ENST00000586375 REREQ9P2R6 1566 aa24.93■■□□□ 1.58
RAD23A-202ENST00000586375 EHBP1L1Q8N3D4 1523 aa24.91■■□□□ 1.58
RAD23A-202ENST00000586375 CCNB3Q8WWL7 1395 aa24.91■■□□□ 1.58
RAD23A-202ENST00000586375 SUPT6HQ7KZ85 1726 aaKnown RBP24.89■■□□□ 1.58
RAD23A-202ENST00000586375 INO80Q9ULG1 1556 aaPredicted RBP24.89■■□□□ 1.58
RAD23A-202ENST00000586375 C3P01024 1663 aa24.89■■□□□ 1.58
RAD23A-202ENST00000586375 CFDP1Q9UEE9 299 aaPredicted RBP24.88■■□□□ 1.57
RAD23A-202ENST00000586375 ATP7AQ04656 1500 aa24.86■■□□□ 1.57
RAD23A-202ENST00000586375 AGLP35573 1532 aa24.86■■□□□ 1.57
RAD23A-202ENST00000586375 SPAG9O60271 1321 aaKnown RBP24.84■■□□□ 1.57
RAD23A-202ENST00000586375 PREX1Q8TCU6 1659 aa24.83■■□□□ 1.57
RAD23A-202ENST00000586375 NCOA2Q15596 1464 aa24.83■■□□□ 1.56
RAD23A-202ENST00000586375 MBD5Q9P267 1494 aa24.83■■□□□ 1.56
RAD23A-202ENST00000586375 PLXNC1O60486 1568 aa24.8■■□□□ 1.56
RAD23A-202ENST00000586375 KIAA1107Q9UPP5 1409 aa24.79■■□□□ 1.56
RAD23A-202ENST00000586375 VPS8Q8N3P4 1428 aa24.78■■□□□ 1.56
RAD23A-202ENST00000586375 STRCQ7RTU9 1775 aa24.77■■□□□ 1.56
RAD23A-202ENST00000586375 KANK4Q5T7N3 995 aaPredicted RBP24.76■■□□□ 1.55
RAD23A-202ENST00000586375 CAMSAP2Q08AD1 1489 aa24.76■■□□□ 1.55
RAD23A-202ENST00000586375 CLTCQ00610 1675 aaKnown RBP24.75■■□□□ 1.55
RAD23A-202ENST00000586375 A2MP01023 1474 aa24.75■■□□□ 1.55
RAD23A-202ENST00000586375 ADGBQ8N7X0 1667 aa24.75■■□□□ 1.55
RAD23A-202ENST00000586375 PLEKHH2Q8IVE3 1493 aa24.74■■□□□ 1.55
RAD23A-202ENST00000586375 LRRC9Q6ZRR7 1453 aa24.71■■□□□ 1.55
RAD23A-202ENST00000586375 UHRF1BP1Q6BDS2 1440 aa24.68■■□□□ 1.54
RAD23A-202ENST00000586375 GGT6Q6P531 493 aa24.65■■□□□ 1.54
RAD23A-202ENST00000586375 MROH2AA6NES4 1674 aa24.65■■□□□ 1.54
RAD23A-202ENST00000586375 CCDC141Q6ZP82 1450 aa24.64■■□□□ 1.53
RAD23A-202ENST00000586375 ZMYM3Q14202 1370 aa24.63■■□□□ 1.53
RAD23A-202ENST00000586375 SETD1BQ9UPS6 1966 aaKnown RBP24.62■■□□□ 1.53
RAD23A-202ENST00000586375 ESF1Q9H501 851 aaKnown RBP24.6■■□□□ 1.53
RAD23A-202ENST00000586375 FBXO41Q8TF61 875 aa24.59■■□□□ 1.53
RAD23A-202ENST00000586375 CNTLNQ9NXG0 1405 aa24.59■■□□□ 1.53
RAD23A-202ENST00000586375 MYO3AQ8NEV4 1616 aa24.58■■□□□ 1.53
RAD23A-202ENST00000586375 PTPRKQ15262 1439 aa24.57■■□□□ 1.52
RAD23A-202ENST00000586375 ARHGEF5Q12774 1597 aa24.56■■□□□ 1.52
RAD23A-202ENST00000586375 RTEL1-TNFRSF6BF6WH68 1400 aa24.56■■□□□ 1.52
RAD23A-202ENST00000586375 DHX29Q7Z478 1369 aaKnown RBP24.54■■□□□ 1.52
RAD23A-202ENST00000586375 CAMSAP1Q5T5Y3 1602 aa24.53■■□□□ 1.52
RAD23A-202ENST00000586375 NCOA1Q15788 1441 aa24.52■■□□□ 1.52
RAD23A-202ENST00000586375 MAP3K1Q13233 1512 aa24.51■■□□□ 1.51
RAD23A-202ENST00000586375 KIF3BO15066 747 aa24.51■■□□□ 1.51
RAD23A-202ENST00000586375 FBXO31Q5XUX0 539 aaPredicted RBP24.51■■□□□ 1.51
RAD23A-202ENST00000586375 CERKQ8TCT0 537 aa24.5■■□□□ 1.51
RAD23A-202ENST00000586375 NPATQ14207 1427 aa24.5■■□□□ 1.51
RAD23A-202ENST00000586375 MYOM3Q5VTT5 1437 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms