RNA–Protein interactions for RNA: ENST00000586074.1

PCSK4-204, Transcript of proprotein convertase subtilisin/kexin type 4, humanhuman

TSL 3

Gene PCSK4, Length 537 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK4-204ENST00000586074 SCAPERQ9BY12 1400 aa31.31■■■□□ 2.6
PCSK4-204ENST00000586074 YEATS2Q9ULM3 1422 aa31.31■■■□□ 2.6
PCSK4-204ENST00000586074 RIMS1Q86UR5 1692 aaKnown RBP31.3■■■□□ 2.6
PCSK4-204ENST00000586074 PCF11O94913 1555 aaKnown RBP31.29■■■□□ 2.6
PCSK4-204ENST00000586074 CLIP1P30622 1438 aa31.27■■■□□ 2.6
PCSK4-204ENST00000586074 TROQ12816 1431 aaPredicted RBP31.27■■■□□ 2.6
PCSK4-204ENST00000586074 EFCAB2Q5VUJ9 269 aa31.25■■■□□ 2.59
PCSK4-204ENST00000586074 LMTK3Q96Q04 1460 aa31.22■■■□□ 2.59
PCSK4-204ENST00000586074 SIGLEC1Q9BZZ2 1709 aa31.21■■■□□ 2.59
PCSK4-204ENST00000586074 ARHGAP5Q13017 1502 aa31.19■■■□□ 2.58
PCSK4-204ENST00000586074 ZNF518AQ6AHZ1 1483 aa31.17■■■□□ 2.58
PCSK4-204ENST00000586074 LRRIQ1Q96JM4 1722 aa31.17■■■□□ 2.58
PCSK4-204ENST00000586074 C9orf84Q5VXU9 1444 aa31.16■■■□□ 2.58
PCSK4-204ENST00000586074 ATP10AO60312 1499 aa31.15■■■□□ 2.58
PCSK4-204ENST00000586074 CCDC18Q5T9S5 1454 aa31.15■■■□□ 2.58
PCSK4-204ENST00000586074 FER1L4A9Z1Z3 1794 aa31.14■■■□□ 2.58
PCSK4-204ENST00000586074 CASKIN1Q8WXD9 1431 aa31.13■■■□□ 2.57
PCSK4-204ENST00000586074 KDM5CP41229 1560 aa31.11■■■□□ 2.57
PCSK4-204ENST00000586074 MLECQ14165 292 aa31.1■■■□□ 2.57
PCSK4-204ENST00000586074 ARHGEF12Q9NZN5 1544 aa31.08■■■□□ 2.57
PCSK4-204ENST00000586074 PREX2Q70Z35 1606 aa31.06■■■□□ 2.56
PCSK4-204ENST00000586074 PLPPR3Q6T4P5 718 aa31.06■■■□□ 2.56
PCSK4-204ENST00000586074 FYCO1Q9BQS8 1478 aa31.04■■■□□ 2.56
PCSK4-204ENST00000586074 CDC42BPBQ9Y5S2 1711 aa31.03■■■□□ 2.56
PCSK4-204ENST00000586074 FBXO41Q8TF61 875 aa31.01■■■□□ 2.55
PCSK4-204ENST00000586074 ABCC1P33527 1531 aa31■■■□□ 2.55
PCSK4-204ENST00000586074 AFAP1Q8N556 730 aa31■■■□□ 2.55
PCSK4-204ENST00000586074 REREQ9P2R6 1566 aa30.99■■■□□ 2.55
PCSK4-204ENST00000586074 DIP2CQ9Y2E4 1556 aa30.99■■■□□ 2.55
PCSK4-204ENST00000586074 MYT1LQ9UL68 1186 aa30.98■■■□□ 2.55
PCSK4-204ENST00000586074 MLH3Q9UHC1 1453 aa30.97■■■□□ 2.55
PCSK4-204ENST00000586074 HSPA2P54652 639 aa30.97■■■□□ 2.55
PCSK4-204ENST00000586074 ITSN2Q9NZM3 1697 aa30.94■■■□□ 2.54
PCSK4-204ENST00000586074 ABCA6Q8N139 1617 aa30.94■■■□□ 2.54
PCSK4-204ENST00000586074 PREX1Q8TCU6 1659 aa30.91■■■□□ 2.54
PCSK4-204ENST00000586074 TRAPPC8Q9Y2L5 1435 aa30.9■■■□□ 2.54
PCSK4-204ENST00000586074 CDC42BPAQ5VT25 1732 aa30.9■■■□□ 2.54
PCSK4-204ENST00000586074 AGLP35573 1532 aa30.87■■■□□ 2.53
PCSK4-204ENST00000586074 CEBPAP49715 358 aaPredicted RBP30.81■■■□□ 2.52
PCSK4-204ENST00000586074 KIDINS220Q9ULH0 1771 aa30.81■■■□□ 2.52
PCSK4-204ENST00000586074 UHRF1BP1Q6BDS2 1440 aa30.8■■■□□ 2.52
PCSK4-204ENST00000586074 SAMD9LQ8IVG5 1584 aa30.79■■■□□ 2.52
PCSK4-204ENST00000586074 GPATCH8Q9UKJ3 1502 aaKnown RBP30.78■■■□□ 2.52
PCSK4-204ENST00000586074 SYCP2Q9BX26 1530 aa30.78■■■□□ 2.52
PCSK4-204ENST00000586074 ESF1Q9H501 851 aaKnown RBP30.77■■■□□ 2.52
PCSK4-204ENST00000586074 ZNF777Q9ULD5 760 aaPredicted RBP30.76■■■□□ 2.51
PCSK4-204ENST00000586074 PLEKHH2Q8IVE3 1493 aa30.74■■■□□ 2.51
PCSK4-204ENST00000586074 C3P01024 1663 aa30.74■■■□□ 2.51
PCSK4-204ENST00000586074 CNTLNQ9NXG0 1405 aa30.73■■■□□ 2.51
PCSK4-204ENST00000586074 MTUS2Q5JR59 1369 aa30.71■■■□□ 2.51
PCSK4-204ENST00000586074 SETD1BQ9UPS6 1966 aaKnown RBP30.7■■■□□ 2.51
PCSK4-204ENST00000586074 CCNB3Q8WWL7 1395 aa30.7■■■□□ 2.51
PCSK4-204ENST00000586074 KIAA1107Q9UPP5 1409 aa30.7■■■□□ 2.5
PCSK4-204ENST00000586074 SPAG9O60271 1321 aaKnown RBP30.7■■■□□ 2.5
PCSK4-204ENST00000586074 CFDP1Q9UEE9 299 aaPredicted RBP30.68■■■□□ 2.5
PCSK4-204ENST00000586074 ATP7AQ04656 1500 aa30.67■■■□□ 2.5
PCSK4-204ENST00000586074 DMRT2Q9Y5R5 561 aa30.66■■■□□ 2.5
PCSK4-204ENST00000586074 CERKQ8TCT0 537 aa30.65■■■□□ 2.5
PCSK4-204ENST00000586074 INO80Q9ULG1 1556 aaPredicted RBP30.65■■■□□ 2.5
PCSK4-204ENST00000586074 HNRNPMP52272 730 aaKnown RBP eCLIP30.64■■■□□ 2.5
PCSK4-204ENST00000586074 EHBP1L1Q8N3D4 1523 aa30.63■■■□□ 2.49
PCSK4-204ENST00000586074 STRCQ7RTU9 1775 aa30.63■■■□□ 2.49
PCSK4-204ENST00000586074 MROH2AA6NES4 1674 aa30.62■■■□□ 2.49
PCSK4-204ENST00000586074 PLXNC1O60486 1568 aa30.6■■■□□ 2.49
PCSK4-204ENST00000586074 TIAM1Q13009 1591 aa30.59■■■□□ 2.49
PCSK4-204ENST00000586074 SUPT6HQ7KZ85 1726 aaKnown RBP30.59■■■□□ 2.49
PCSK4-204ENST00000586074 A2MP01023 1474 aa30.57■■■□□ 2.48
PCSK4-204ENST00000586074 NPATQ14207 1427 aa30.56■■■□□ 2.48
PCSK4-204ENST00000586074 CEP162Q5TB80 1403 aa30.56■■■□□ 2.48
PCSK4-204ENST00000586074 PTPRTO14522 1441 aa30.53■■■□□ 2.48
PCSK4-204ENST00000586074 ADGBQ8N7X0 1667 aa30.51■■■□□ 2.47
PCSK4-204ENST00000586074 ZMYM3Q14202 1370 aa30.5■■■□□ 2.47
PCSK4-204ENST00000586074 NCOA1Q15788 1441 aa30.48■■■□□ 2.47
PCSK4-204ENST00000586074 CLTCQ00610 1675 aaKnown RBP30.48■■■□□ 2.47
PCSK4-204ENST00000586074 MBD5Q9P267 1494 aa30.46■■■□□ 2.47
PCSK4-204ENST00000586074 ZNF644Q9H582 1327 aaPredicted RBP30.45■■■□□ 2.46
PCSK4-204ENST00000586074 RTEL1-TNFRSF6BF6WH68 1400 aa30.43■■■□□ 2.46
PCSK4-204ENST00000586074 CAMSAP1Q5T5Y3 1602 aa30.41■■■□□ 2.46
PCSK4-204ENST00000586074 GGT6Q6P531 493 aa30.41■■■□□ 2.46
PCSK4-204ENST00000586074 MYO3AQ8NEV4 1616 aa30.4■■■□□ 2.46
PCSK4-204ENST00000586074 PPP6R1Q9UPN7 881 aa30.4■■■□□ 2.46
PCSK4-204ENST00000586074 ZNF142P52746 1687 aaPredicted RBP30.39■■■□□ 2.46
PCSK4-204ENST00000586074 NCOA2Q15596 1464 aa30.39■■■□□ 2.46
PCSK4-204ENST00000586074 CCDC141Q6ZP82 1450 aa30.38■■■□□ 2.45
PCSK4-204ENST00000586074 PTPRKQ15262 1439 aa30.38■■■□□ 2.45
PCSK4-204ENST00000586074 CAMSAP2Q08AD1 1489 aa30.37■■■□□ 2.45
PCSK4-204ENST00000586074 CEP170BQ9Y4F5 1589 aaPredicted RBP30.34■■■□□ 2.45
PCSK4-204ENST00000586074 DHX29Q7Z478 1369 aaKnown RBP30.33■■■□□ 2.45
PCSK4-204ENST00000586074 PLA2R1Q13018 1463 aa30.32■■■□□ 2.44
PCSK4-204ENST00000586074 LTBP4Q8N2S1 1624 aa30.32■■■□□ 2.44
PCSK4-204ENST00000586074 IQSEC2Q5JU85 1478 aa30.31■■■□□ 2.44
PCSK4-204ENST00000586074 RSPH4AQ5TD94 716 aa30.3■■■□□ 2.44
PCSK4-204ENST00000586074 FAM135AQ9P2D6 1515 aa30.3■■■□□ 2.44
PCSK4-204ENST00000586074 VPS8Q8N3P4 1428 aa30.27■■■□□ 2.44
PCSK4-204ENST00000586074 ARHGEF5Q12774 1597 aa30.26■■■□□ 2.43
PCSK4-204ENST00000586074 PKD2Q13563 968 aa30.25■■■□□ 2.43
PCSK4-204ENST00000586074 KDM5DQ9BY66 1539 aa30.25■■■□□ 2.43
PCSK4-204ENST00000586074 TCOF1Q13428 1488 aaKnown RBP30.24■■■□□ 2.43
PCSK4-204ENST00000586074 NCKAP5LQ9HCH0 1330 aa30.23■■■□□ 2.43
PCSK4-204ENST00000586074 KIF3BO15066 747 aa30.22■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms