RNA–Protein interactions for RNA: ENST00000586059.5

CNN1-204, Transcript of calponin 1, humanhuman

TSL 3

Gene CNN1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-204ENST00000586059 ITSN2Q9NZM3 1697 aa18.98■□□□□ 0.63
CNN1-204ENST00000586059 AKNAQ7Z591 1439 aa18.98■□□□□ 0.63
CNN1-204ENST00000586059 APLP2Q06481 763 aa18.97■□□□□ 0.63
CNN1-204ENST00000586059 RICTORQ6R327 1708 aa18.96■□□□□ 0.63
CNN1-204ENST00000586059 FRMPD1Q5SYB0 1578 aa18.95■□□□□ 0.62
CNN1-204ENST00000586059 ADGRL1O94910 1474 aa18.95■□□□□ 0.62
CNN1-204ENST00000586059 NCOA2Q15596 1464 aa18.95■□□□□ 0.62
CNN1-204ENST00000586059 CCNB3Q8WWL7 1395 aa18.94■□□□□ 0.62
CNN1-204ENST00000586059 EFCAB2Q5VUJ9 269 aa18.94■□□□□ 0.62
CNN1-204ENST00000586059 GPATCH8Q9UKJ3 1502 aaKnown RBP18.94■□□□□ 0.62
CNN1-204ENST00000586059 DENND4BO75064 1496 aaPredicted RBP18.92■□□□□ 0.62
CNN1-204ENST00000586059 KANK4Q5T7N3 995 aaPredicted RBP18.91■□□□□ 0.62
CNN1-204ENST00000586059 ABCC1P33527 1531 aa18.9■□□□□ 0.62
CNN1-204ENST00000586059 SAMD9LQ8IVG5 1584 aa18.9■□□□□ 0.62
CNN1-204ENST00000586059 SCAPERQ9BY12 1400 aa18.89■□□□□ 0.61
CNN1-204ENST00000586059 RAPGEF3O95398 923 aa18.88■□□□□ 0.61
CNN1-204ENST00000586059 POGZQ7Z3K3 1410 aa18.87■□□□□ 0.61
CNN1-204ENST00000586059 ZMYM4Q5VZL5 1548 aa18.85■□□□□ 0.61
CNN1-204ENST00000586059 CFDP1Q9UEE9 299 aaPredicted RBP18.85■□□□□ 0.61
CNN1-204ENST00000586059 ZNF777Q9ULD5 760 aaPredicted RBP18.85■□□□□ 0.61
CNN1-204ENST00000586059 SYCP2Q9BX26 1530 aa18.84■□□□□ 0.61
CNN1-204ENST00000586059 ARHGEF40Q8TER5 1519 aa18.83■□□□□ 0.6
CNN1-204ENST00000586059 ZNF518AQ6AHZ1 1483 aa18.83■□□□□ 0.6
CNN1-204ENST00000586059 ARHGEF12Q9NZN5 1544 aa18.82■□□□□ 0.6
CNN1-204ENST00000586059 PLEKHH2Q8IVE3 1493 aa18.82■□□□□ 0.6
CNN1-204ENST00000586059 KDM5CP41229 1560 aa18.81■□□□□ 0.6
CNN1-204ENST00000586059 MYOM3Q5VTT5 1437 aa18.8■□□□□ 0.6
CNN1-204ENST00000586059 HECW2Q9P2P5 1572 aa18.8■□□□□ 0.6
CNN1-204ENST00000586059 ZFYVE16Q7Z3T8 1539 aa18.79■□□□□ 0.6
CNN1-204ENST00000586059 CAMSAP2Q08AD1 1489 aa18.79■□□□□ 0.6
CNN1-204ENST00000586059 TRAPPC8Q9Y2L5 1435 aa18.79■□□□□ 0.6
CNN1-204ENST00000586059 ZNF644Q9H582 1327 aaPredicted RBP18.76■□□□□ 0.59
CNN1-204ENST00000586059 KIAA1107Q9UPP5 1409 aa18.76■□□□□ 0.59
CNN1-204ENST00000586059 MAGI2Q86UL8 1455 aa18.76■□□□□ 0.59
CNN1-204ENST00000586059 AFAP1Q8N556 730 aa18.75■□□□□ 0.59
CNN1-204ENST00000586059 YEATS2Q9ULM3 1422 aa18.74■□□□□ 0.59
CNN1-204ENST00000586059 HNRNPMP52272 730 aaKnown RBP eCLIP18.74■□□□□ 0.59
CNN1-204ENST00000586059 PTPN23Q9H3S7 1636 aa18.74■□□□□ 0.59
CNN1-204ENST00000586059 MIA2Q96PC5 1412 aa18.74■□□□□ 0.59
CNN1-204ENST00000586059 KIDINS220Q9ULH0 1771 aa18.73■□□□□ 0.59
CNN1-204ENST00000586059 ABCA6Q8N139 1617 aa18.73■□□□□ 0.59
CNN1-204ENST00000586059 MYT1LQ9UL68 1186 aa18.71■□□□□ 0.59
CNN1-204ENST00000586059 ARHGEF5Q12774 1597 aa18.71■□□□□ 0.59
CNN1-204ENST00000586059 INO80Q9ULG1 1556 aaPredicted RBP18.71■□□□□ 0.59
CNN1-204ENST00000586059 DIP2CQ9Y2E4 1556 aa18.71■□□□□ 0.59
CNN1-204ENST00000586059 MBD5Q9P267 1494 aa18.71■□□□□ 0.59
CNN1-204ENST00000586059 MLH3Q9UHC1 1453 aa18.71■□□□□ 0.59
CNN1-204ENST00000586059 FGD6Q6ZV73 1430 aa18.7■□□□□ 0.58
CNN1-204ENST00000586059 CCDC141Q6ZP82 1450 aa18.7■□□□□ 0.58
CNN1-204ENST00000586059 ATP7AQ04656 1500 aa18.69■□□□□ 0.58
CNN1-204ENST00000586059 SIGLEC1Q9BZZ2 1709 aa18.69■□□□□ 0.58
CNN1-204ENST00000586059 PPARGC1BQ86YN6 1023 aaKnown RBP18.69■□□□□ 0.58
CNN1-204ENST00000586059 SPAG9O60271 1321 aaKnown RBP18.67■□□□□ 0.58
CNN1-204ENST00000586059 C9orf84Q5VXU9 1444 aa18.66■□□□□ 0.58
CNN1-204ENST00000586059 ATP10AO60312 1499 aa18.66■□□□□ 0.58
CNN1-204ENST00000586059 CROCC2H7BZ55 1655 aa18.66■□□□□ 0.58
CNN1-204ENST00000586059 TCOF1Q13428 1488 aaKnown RBP18.65■□□□□ 0.58
CNN1-204ENST00000586059 BCORL1Q5H9F3 1711 aa18.64■□□□□ 0.57
CNN1-204ENST00000586059 ADGBQ8N7X0 1667 aa18.63■□□□□ 0.57
CNN1-204ENST00000586059 ARID4BQ4LE39 1312 aaPredicted RBP18.63■□□□□ 0.57
CNN1-204ENST00000586059 REREQ9P2R6 1566 aa18.63■□□□□ 0.57
CNN1-204ENST00000586059 DNMT1P26358 1616 aaKnown RBP18.63■□□□□ 0.57
CNN1-204ENST00000586059 MAST1Q9Y2H9 1570 aa18.6■□□□□ 0.57
CNN1-204ENST00000586059 RSPH4AQ5TD94 716 aa18.6■□□□□ 0.57
CNN1-204ENST00000586059 RTEL1-TNFRSF6BF6WH68 1400 aa18.59■□□□□ 0.57
CNN1-204ENST00000586059 ADAMTSL3P82987 1691 aa18.59■□□□□ 0.57
CNN1-204ENST00000586059 KDM4FA0A1W2PPD8 638 aa18.58■□□□□ 0.56
CNN1-204ENST00000586059 MADDQ8WXG6 1647 aa18.57■□□□□ 0.56
CNN1-204ENST00000586059 FAM50AQ14320 339 aaKnown RBP18.57■□□□□ 0.56
CNN1-204ENST00000586059 PLXNC1O60486 1568 aa18.56■□□□□ 0.56
CNN1-204ENST00000586059 FER1L4A9Z1Z3 1794 aa18.56■□□□□ 0.56
CNN1-204ENST00000586059 TSPY4P0CV99 314 aa18.56■□□□□ 0.56
CNN1-204ENST00000586059 TSPY10P0CW01 314 aa18.56■□□□□ 0.56
CNN1-204ENST00000586059 SHANK2Q9UPX8 1470 aa18.56■□□□□ 0.56
CNN1-204ENST00000586059 DAPK1P53355 1430 aa18.56■□□□□ 0.56
CNN1-204ENST00000586059 A2MP01023 1474 aa18.55■□□□□ 0.56
CNN1-204ENST00000586059 ABCC5O15440 1437 aa18.55■□□□□ 0.56
CNN1-204ENST00000586059 AGLP35573 1532 aa18.54■□□□□ 0.56
CNN1-204ENST00000586059 RIMS1Q86UR5 1692 aaKnown RBP18.54■□□□□ 0.56
CNN1-204ENST00000586059 MLECQ14165 292 aa18.52■□□□□ 0.56
CNN1-204ENST00000586059 AEBP2Q6ZN18 517 aaPredicted RBP18.49■□□□□ 0.55
CNN1-204ENST00000586059 RRBP1Q9P2E9 1410 aaKnown RBP18.48■□□□□ 0.55
CNN1-204ENST00000586059 DHX29Q7Z478 1369 aaKnown RBP18.47■□□□□ 0.55
CNN1-204ENST00000586059 EIF2AK4Q9P2K8 1649 aaKnown RBP18.45■□□□□ 0.54
CNN1-204ENST00000586059 DUOX2Q9NRD8 1548 aa18.45■□□□□ 0.54
CNN1-204ENST00000586059 CHIC2Q9UKJ5 165 aa18.45■□□□□ 0.54
CNN1-204ENST00000586059 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.44■□□□□ 0.54
CNN1-204ENST00000586059 KIF15Q9NS87 1388 aa18.44■□□□□ 0.54
CNN1-204ENST00000586059 ADGRL2O95490 1459 aa18.44■□□□□ 0.54
CNN1-204ENST00000586059 ANKRD30AQ9BXX3 1397 aa18.43■□□□□ 0.54
CNN1-204ENST00000586059 PTPRMP28827 1452 aa18.43■□□□□ 0.54
CNN1-204ENST00000586059 RNF17Q9BXT8 1623 aaKnown RBP18.41■□□□□ 0.54
CNN1-204ENST00000586059 PTPRKQ15262 1439 aa18.41■□□□□ 0.54
CNN1-204ENST00000586059 CLTCQ00610 1675 aaKnown RBP18.41■□□□□ 0.54
CNN1-204ENST00000586059 ITGAEP38570 1179 aa18.4■□□□□ 0.54
CNN1-204ENST00000586059 RRP7BPQ9NSQ0 103 aa18.4■□□□□ 0.54
CNN1-204ENST00000586059 NCOA1Q15788 1441 aa18.4■□□□□ 0.54
CNN1-204ENST00000586059 MROH2AA6NES4 1674 aa18.39■□□□□ 0.53
CNN1-204ENST00000586059 KIF3BO15066 747 aa18.39■□□□□ 0.53
CNN1-204ENST00000586059 C3P01024 1663 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms