RNA–Protein interactions for RNA: ENST00000585967.5

MBD3-204, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-204ENST00000585967 ARID4BQ4LE39 1312 aaPredicted RBP27.77■■■□□ 2.04
MBD3-204ENST00000585967 MADDQ8WXG6 1647 aa27.75■■■□□ 2.03
MBD3-204ENST00000585967 POGZQ7Z3K3 1410 aa27.74■■■□□ 2.03
MBD3-204ENST00000585967 CASKIN1Q8WXD9 1431 aa27.74■■■□□ 2.03
MBD3-204ENST00000585967 ARHGAP5Q13017 1502 aa27.72■■■□□ 2.03
MBD3-204ENST00000585967 PTPRMP28827 1452 aa27.71■■■□□ 2.03
MBD3-204ENST00000585967 FYCO1Q9BQS8 1478 aa27.71■■■□□ 2.03
MBD3-204ENST00000585967 SCAPERQ9BY12 1400 aa27.7■■■□□ 2.03
MBD3-204ENST00000585967 EFCAB2Q5VUJ9 269 aa27.7■■■□□ 2.02
MBD3-204ENST00000585967 RIMS1Q86UR5 1692 aaKnown RBP27.69■■■□□ 2.02
MBD3-204ENST00000585967 PREX2Q70Z35 1606 aa27.68■■■□□ 2.02
MBD3-204ENST00000585967 CDC42BPBQ9Y5S2 1711 aa27.67■■■□□ 2.02
MBD3-204ENST00000585967 ZNF518AQ6AHZ1 1483 aa27.66■■■□□ 2.02
MBD3-204ENST00000585967 FER1L4A9Z1Z3 1794 aa27.65■■■□□ 2.02
MBD3-204ENST00000585967 YEATS2Q9ULM3 1422 aa27.6■■■□□ 2.01
MBD3-204ENST00000585967 CDC42BPAQ5VT25 1732 aa27.6■■■□□ 2.01
MBD3-204ENST00000585967 KDM5CP41229 1560 aa27.59■■■□□ 2.01
MBD3-204ENST00000585967 C9orf84Q5VXU9 1444 aa27.58■■■□□ 2
MBD3-204ENST00000585967 ITSN2Q9NZM3 1697 aa27.57■■■□□ 2
MBD3-204ENST00000585967 ATP10AO60312 1499 aa27.57■■■□□ 2
MBD3-204ENST00000585967 SIGLEC1Q9BZZ2 1709 aa27.56■■■□□ 2
MBD3-204ENST00000585967 ABCC1P33527 1531 aa27.53■■■□□ 2
MBD3-204ENST00000585967 MYT1LQ9UL68 1186 aa27.49■■□□□ 1.99
MBD3-204ENST00000585967 REREQ9P2R6 1566 aa27.48■■□□□ 1.99
MBD3-204ENST00000585967 DIP2CQ9Y2E4 1556 aa27.47■■□□□ 1.99
MBD3-204ENST00000585967 ARHGEF12Q9NZN5 1544 aa27.46■■□□□ 1.99
MBD3-204ENST00000585967 ABCA6Q8N139 1617 aa27.45■■□□□ 1.98
MBD3-204ENST00000585967 MLH3Q9UHC1 1453 aa27.44■■□□□ 1.98
MBD3-204ENST00000585967 MLECQ14165 292 aa27.42■■□□□ 1.98
MBD3-204ENST00000585967 LMTK3Q96Q04 1460 aa27.42■■□□□ 1.98
MBD3-204ENST00000585967 AFAP1Q8N556 730 aa27.4■■□□□ 1.98
MBD3-204ENST00000585967 PREX1Q8TCU6 1659 aa27.4■■□□□ 1.98
MBD3-204ENST00000585967 MTUS2Q5JR59 1369 aa27.38■■□□□ 1.97
MBD3-204ENST00000585967 KIDINS220Q9ULH0 1771 aa27.38■■□□□ 1.97
MBD3-204ENST00000585967 SAMD9LQ8IVG5 1584 aa27.38■■□□□ 1.97
MBD3-204ENST00000585967 PLEKHH2Q8IVE3 1493 aa27.38■■□□□ 1.97
MBD3-204ENST00000585967 EHBP1L1Q8N3D4 1523 aa27.37■■□□□ 1.97
MBD3-204ENST00000585967 CEP162Q5TB80 1403 aa27.35■■□□□ 1.97
MBD3-204ENST00000585967 SYCP2Q9BX26 1530 aa27.35■■□□□ 1.97
MBD3-204ENST00000585967 TRAPPC8Q9Y2L5 1435 aa27.34■■□□□ 1.97
MBD3-204ENST00000585967 SETD1BQ9UPS6 1966 aaKnown RBP27.34■■□□□ 1.97
MBD3-204ENST00000585967 AGLP35573 1532 aa27.34■■□□□ 1.97
MBD3-204ENST00000585967 GPATCH8Q9UKJ3 1502 aaKnown RBP27.34■■□□□ 1.97
MBD3-204ENST00000585967 CCNB3Q8WWL7 1395 aa27.34■■□□□ 1.97
MBD3-204ENST00000585967 PLPPR3Q6T4P5 718 aa27.33■■□□□ 1.97
MBD3-204ENST00000585967 ZNF777Q9ULD5 760 aaPredicted RBP27.3■■□□□ 1.96
MBD3-204ENST00000585967 ILDR1Q86SU0 546 aaPredicted RBP27.29■■□□□ 1.96
MBD3-204ENST00000585967 ESF1Q9H501 851 aaKnown RBP27.28■■□□□ 1.96
MBD3-204ENST00000585967 KIAA1107Q9UPP5 1409 aa27.27■■□□□ 1.96
MBD3-204ENST00000585967 CFDP1Q9UEE9 299 aaPredicted RBP27.27■■□□□ 1.96
MBD3-204ENST00000585967 SUPT6HQ7KZ85 1726 aaKnown RBP27.27■■□□□ 1.96
MBD3-204ENST00000585967 C3P01024 1663 aa27.26■■□□□ 1.95
MBD3-204ENST00000585967 TIAM1Q13009 1591 aa27.26■■□□□ 1.95
MBD3-204ENST00000585967 ATP7AQ04656 1500 aa27.26■■□□□ 1.95
MBD3-204ENST00000585967 INO80Q9ULG1 1556 aaPredicted RBP27.25■■□□□ 1.95
MBD3-204ENST00000585967 ADGBQ8N7X0 1667 aa27.24■■□□□ 1.95
MBD3-204ENST00000585967 SPAG9O60271 1321 aaKnown RBP27.22■■□□□ 1.95
MBD3-204ENST00000585967 MROH2AA6NES4 1674 aa27.22■■□□□ 1.95
MBD3-204ENST00000585967 CNTLNQ9NXG0 1405 aa27.22■■□□□ 1.95
MBD3-204ENST00000585967 UHRF1BP1Q6BDS2 1440 aa27.18■■□□□ 1.94
MBD3-204ENST00000585967 PLXNC1O60486 1568 aa27.15■■□□□ 1.94
MBD3-204ENST00000585967 HNRNPMP52272 730 aaKnown RBP eCLIP27.15■■□□□ 1.943e-6■■■■□ 22.1
MBD3-204ENST00000585967 HSPA2P54652 639 aa27.15■■□□□ 1.94
MBD3-204ENST00000585967 A2MP01023 1474 aa27.12■■□□□ 1.93
MBD3-204ENST00000585967 CEBPAP49715 358 aaPredicted RBP27.1■■□□□ 1.93
MBD3-204ENST00000585967 VPS8Q8N3P4 1428 aa27.09■■□□□ 1.93
MBD3-204ENST00000585967 CLTCQ00610 1675 aaKnown RBP27.09■■□□□ 1.93
MBD3-204ENST00000585967 NCOA2Q15596 1464 aa27.09■■□□□ 1.93
MBD3-204ENST00000585967 FBXO41Q8TF61 875 aa27.08■■□□□ 1.93
MBD3-204ENST00000585967 RTEL1-TNFRSF6BF6WH68 1400 aa27.05■■□□□ 1.92
MBD3-204ENST00000585967 DMRT2Q9Y5R5 561 aa27.04■■□□□ 1.92
MBD3-204ENST00000585967 CAMSAP2Q08AD1 1489 aa27.04■■□□□ 1.92
MBD3-204ENST00000585967 CCDC141Q6ZP82 1450 aa27.04■■□□□ 1.92
MBD3-204ENST00000585967 STRCQ7RTU9 1775 aa27.04■■□□□ 1.92
MBD3-204ENST00000585967 MBD5Q9P267 1494 aa27.02■■□□□ 1.92
MBD3-204ENST00000585967 NPATQ14207 1427 aa27.02■■□□□ 1.92
MBD3-204ENST00000585967 MAP3K1Q13233 1512 aa27■■□□□ 1.91
MBD3-204ENST00000585967 RSPH4AQ5TD94 716 aa26.99■■□□□ 1.91
MBD3-204ENST00000585967 ARHGEF5Q12774 1597 aa26.99■■□□□ 1.91
MBD3-204ENST00000585967 LRRC9Q6ZRR7 1453 aa26.99■■□□□ 1.91
MBD3-204ENST00000585967 ZNF644Q9H582 1327 aaPredicted RBP26.97■■□□□ 1.91
MBD3-204ENST00000585967 PPP6R1Q9UPN7 881 aa26.97■■□□□ 1.91
MBD3-204ENST00000585967 ZNF142P52746 1687 aaPredicted RBP26.97■■□□□ 1.91
MBD3-204ENST00000585967 FAM135AQ9P2D6 1515 aa26.96■■□□□ 1.91
MBD3-204ENST00000585967 MYO3AQ8NEV4 1616 aa26.95■■□□□ 1.91
MBD3-204ENST00000585967 ZMYM3Q14202 1370 aa26.94■■□□□ 1.9
MBD3-204ENST00000585967 LOC105371045A0A1W2PR82 267 aa26.91■■□□□ 1.9
MBD3-204ENST00000585967 GGT6Q6P531 493 aa26.91■■□□□ 1.9
MBD3-204ENST00000585967 DHX29Q7Z478 1369 aaKnown RBP26.9■■□□□ 1.9
MBD3-204ENST00000585967 PTPRTO14522 1441 aa26.88■■□□□ 1.89
MBD3-204ENST00000585967 TSPY4P0CV99 314 aa26.87■■□□□ 1.89
MBD3-204ENST00000585967 TSPY10P0CW01 314 aa26.87■■□□□ 1.89
MBD3-204ENST00000585967 MAST1Q9Y2H9 1570 aa26.86■■□□□ 1.89
MBD3-204ENST00000585967 CEP170BQ9Y4F5 1589 aaPredicted RBP26.86■■□□□ 1.89
MBD3-204ENST00000585967 CAMSAP1Q5T5Y3 1602 aa26.86■■□□□ 1.89
MBD3-204ENST00000585967 KDM5DQ9BY66 1539 aa26.85■■□□□ 1.89
MBD3-204ENST00000585967 NCOA1Q15788 1441 aa26.85■■□□□ 1.89
MBD3-204ENST00000585967 APLP2Q06481 763 aa26.85■■□□□ 1.89
MBD3-204ENST00000585967 CERKQ8TCT0 537 aa26.85■■□□□ 1.89
MBD3-204ENST00000585967 MIA2Q96PC5 1412 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms