RNA–Protein interactions for RNA: ENST00000585876.1

LRFN3-202, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

TSL 4

Gene LRFN3, Length 558 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-202ENST00000585876 FRMPD1Q5SYB0 1578 aa18.43■□□□□ 0.54
LRFN3-202ENST00000585876 LRRC9Q6ZRR7 1453 aa18.43■□□□□ 0.54
LRFN3-202ENST00000585876 ARHGAP5Q13017 1502 aa18.4■□□□□ 0.54
LRFN3-202ENST00000585876 AKNAQ7Z591 1439 aa18.4■□□□□ 0.54
LRFN3-202ENST00000585876 GPATCH8Q9UKJ3 1502 aaKnown RBP18.39■□□□□ 0.53
LRFN3-202ENST00000585876 NCOA2Q15596 1464 aa18.37■□□□□ 0.53
LRFN3-202ENST00000585876 ABCC1P33527 1531 aa18.37■□□□□ 0.53
LRFN3-202ENST00000585876 ZMYM4Q5VZL5 1548 aa18.37■□□□□ 0.53
LRFN3-202ENST00000585876 ADGRL1O94910 1474 aa18.36■□□□□ 0.53
LRFN3-202ENST00000585876 SAMD9LQ8IVG5 1584 aa18.35■□□□□ 0.53
LRFN3-202ENST00000585876 DENND4BO75064 1496 aaPredicted RBP18.33■□□□□ 0.53
LRFN3-202ENST00000585876 KDM5CP41229 1560 aa18.33■□□□□ 0.52
LRFN3-202ENST00000585876 POGZQ7Z3K3 1410 aa18.32■□□□□ 0.52
LRFN3-202ENST00000585876 EFCAB2Q5VUJ9 269 aa18.32■□□□□ 0.52
LRFN3-202ENST00000585876 CCNB3Q8WWL7 1395 aa18.31■□□□□ 0.52
LRFN3-202ENST00000585876 ARHGEF40Q8TER5 1519 aa18.3■□□□□ 0.52
LRFN3-202ENST00000585876 ZNF518AQ6AHZ1 1483 aa18.29■□□□□ 0.52
LRFN3-202ENST00000585876 SCAPERQ9BY12 1400 aa18.29■□□□□ 0.52
LRFN3-202ENST00000585876 PLEKHH2Q8IVE3 1493 aa18.28■□□□□ 0.52
LRFN3-202ENST00000585876 KANK4Q5T7N3 995 aaPredicted RBP18.28■□□□□ 0.52
LRFN3-202ENST00000585876 SYCP2Q9BX26 1530 aa18.27■□□□□ 0.51
LRFN3-202ENST00000585876 ARHGEF12Q9NZN5 1544 aa18.27■□□□□ 0.51
LRFN3-202ENST00000585876 MAGI2Q86UL8 1455 aa18.26■□□□□ 0.51
LRFN3-202ENST00000585876 KIAA1107Q9UPP5 1409 aa18.26■□□□□ 0.51
LRFN3-202ENST00000585876 HECW2Q9P2P5 1572 aa18.25■□□□□ 0.51
LRFN3-202ENST00000585876 APLP2Q06481 763 aa18.24■□□□□ 0.51
LRFN3-202ENST00000585876 MYOM3Q5VTT5 1437 aa18.23■□□□□ 0.51
LRFN3-202ENST00000585876 RAPGEF3O95398 923 aa18.23■□□□□ 0.51
LRFN3-202ENST00000585876 ZFYVE16Q7Z3T8 1539 aa18.23■□□□□ 0.51
LRFN3-202ENST00000585876 MIA2Q96PC5 1412 aa18.22■□□□□ 0.51
LRFN3-202ENST00000585876 INO80Q9ULG1 1556 aaPredicted RBP18.21■□□□□ 0.51
LRFN3-202ENST00000585876 CAMSAP2Q08AD1 1489 aa18.21■□□□□ 0.51
LRFN3-202ENST00000585876 CFDP1Q9UEE9 299 aaPredicted RBP18.21■□□□□ 0.51
LRFN3-202ENST00000585876 ARHGEF5Q12774 1597 aa18.21■□□□□ 0.51
LRFN3-202ENST00000585876 MLH3Q9UHC1 1453 aa18.2■□□□□ 0.5
LRFN3-202ENST00000585876 KIDINS220Q9ULH0 1771 aa18.2■□□□□ 0.5
LRFN3-202ENST00000585876 TRAPPC8Q9Y2L5 1435 aa18.2■□□□□ 0.5
LRFN3-202ENST00000585876 ABCA6Q8N139 1617 aa18.19■□□□□ 0.5
LRFN3-202ENST00000585876 MBD5Q9P267 1494 aa18.19■□□□□ 0.5
LRFN3-202ENST00000585876 REREQ9P2R6 1566 aa18.18■□□□□ 0.5
LRFN3-202ENST00000585876 DIP2CQ9Y2E4 1556 aa18.17■□□□□ 0.5
LRFN3-202ENST00000585876 SIGLEC1Q9BZZ2 1709 aa18.17■□□□□ 0.5
LRFN3-202ENST00000585876 PTPN23Q9H3S7 1636 aa18.16■□□□□ 0.5
LRFN3-202ENST00000585876 YEATS2Q9ULM3 1422 aa18.15■□□□□ 0.5
LRFN3-202ENST00000585876 CROCC2H7BZ55 1655 aa18.15■□□□□ 0.5
LRFN3-202ENST00000585876 ATP7AQ04656 1500 aa18.14■□□□□ 0.49
LRFN3-202ENST00000585876 FGD6Q6ZV73 1430 aa18.14■□□□□ 0.49
LRFN3-202ENST00000585876 TCOF1Q13428 1488 aaKnown RBP18.14■□□□□ 0.49
LRFN3-202ENST00000585876 CCDC141Q6ZP82 1450 aa18.14■□□□□ 0.49
LRFN3-202ENST00000585876 AFAP1Q8N556 730 aa18.12■□□□□ 0.49
LRFN3-202ENST00000585876 ZNF777Q9ULD5 760 aaPredicted RBP18.12■□□□□ 0.49
LRFN3-202ENST00000585876 ZNF644Q9H582 1327 aaPredicted RBP18.12■□□□□ 0.49
LRFN3-202ENST00000585876 MAST1Q9Y2H9 1570 aa18.12■□□□□ 0.49
LRFN3-202ENST00000585876 ADGBQ8N7X0 1667 aa18.12■□□□□ 0.49
LRFN3-202ENST00000585876 BCORL1Q5H9F3 1711 aa18.12■□□□□ 0.49
LRFN3-202ENST00000585876 ATP10AO60312 1499 aa18.1■□□□□ 0.49
LRFN3-202ENST00000585876 C9orf84Q5VXU9 1444 aa18.1■□□□□ 0.49
LRFN3-202ENST00000585876 DNMT1P26358 1616 aaKnown RBP18.09■□□□□ 0.49
LRFN3-202ENST00000585876 PLXNC1O60486 1568 aa18.09■□□□□ 0.49
LRFN3-202ENST00000585876 ADAMTSL3P82987 1691 aa18.09■□□□□ 0.49
LRFN3-202ENST00000585876 RTEL1-TNFRSF6BF6WH68 1400 aa18.08■□□□□ 0.49
LRFN3-202ENST00000585876 HNRNPMP52272 730 aaKnown RBP eCLIP18.08■□□□□ 0.48
LRFN3-202ENST00000585876 AGLP35573 1532 aa18.07■□□□□ 0.48
LRFN3-202ENST00000585876 SHANK2Q9UPX8 1470 aa18.07■□□□□ 0.48
LRFN3-202ENST00000585876 RSPH4AQ5TD94 716 aa18.06■□□□□ 0.48
LRFN3-202ENST00000585876 SPAG9O60271 1321 aaKnown RBP18.04■□□□□ 0.48
LRFN3-202ENST00000585876 FER1L4A9Z1Z3 1794 aa18.01■□□□□ 0.47
LRFN3-202ENST00000585876 MADDQ8WXG6 1647 aa18.01■□□□□ 0.47
LRFN3-202ENST00000585876 KDM4FA0A1W2PPD8 638 aa17.99■□□□□ 0.47
LRFN3-202ENST00000585876 A2MP01023 1474 aa17.99■□□□□ 0.47
LRFN3-202ENST00000585876 ABCC5O15440 1437 aa17.98■□□□□ 0.47
LRFN3-202ENST00000585876 DAPK1P53355 1430 aa17.98■□□□□ 0.47
LRFN3-202ENST00000585876 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.98■□□□□ 0.47
LRFN3-202ENST00000585876 EIF2AK4Q9P2K8 1649 aaKnown RBP17.97■□□□□ 0.47
LRFN3-202ENST00000585876 RRBP1Q9P2E9 1410 aaKnown RBP17.96■□□□□ 0.47
LRFN3-202ENST00000585876 RIMS1Q86UR5 1692 aaKnown RBP17.95■□□□□ 0.46
LRFN3-202ENST00000585876 ADGRL2O95490 1459 aa17.95■□□□□ 0.46
LRFN3-202ENST00000585876 RNF17Q9BXT8 1623 aaKnown RBP17.93■□□□□ 0.46
LRFN3-202ENST00000585876 TSPY4P0CV99 314 aa17.92■□□□□ 0.46
LRFN3-202ENST00000585876 TSPY10P0CW01 314 aa17.92■□□□□ 0.46
LRFN3-202ENST00000585876 MYT1LQ9UL68 1186 aa17.92■□□□□ 0.46
LRFN3-202ENST00000585876 MROH2AA6NES4 1674 aa17.92■□□□□ 0.46
LRFN3-202ENST00000585876 DUOX2Q9NRD8 1548 aa17.92■□□□□ 0.46
LRFN3-202ENST00000585876 DHX29Q7Z478 1369 aaKnown RBP17.91■□□□□ 0.46
LRFN3-202ENST00000585876 FAM135AQ9P2D6 1515 aa17.91■□□□□ 0.46
LRFN3-202ENST00000585876 ARID4BQ4LE39 1312 aaPredicted RBP17.9■□□□□ 0.46
LRFN3-202ENST00000585876 PTPRMP28827 1452 aa17.88■□□□□ 0.45
LRFN3-202ENST00000585876 PPARGC1BQ86YN6 1023 aaKnown RBP17.88■□□□□ 0.45
LRFN3-202ENST00000585876 DEPDC5O75140 1603 aa17.87■□□□□ 0.45
LRFN3-202ENST00000585876 NCOA1Q15788 1441 aa17.87■□□□□ 0.45
LRFN3-202ENST00000585876 KIF15Q9NS87 1388 aa17.86■□□□□ 0.45
LRFN3-202ENST00000585876 ERBINQ96RT1 1412 aa17.86■□□□□ 0.45
LRFN3-202ENST00000585876 MROH1Q8NDA8 1641 aa17.86■□□□□ 0.45
LRFN3-202ENST00000585876 C3P01024 1663 aa17.85■□□□□ 0.45
LRFN3-202ENST00000585876 ZC3H13Q5T200 1668 aaKnown RBP17.85■□□□□ 0.45
LRFN3-202ENST00000585876 CLTCQ00610 1675 aaKnown RBP17.84■□□□□ 0.45
LRFN3-202ENST00000585876 PTPRKQ15262 1439 aa17.84■□□□□ 0.45
LRFN3-202ENST00000585876 CNTLNQ9NXG0 1405 aa17.84■□□□□ 0.45
LRFN3-202ENST00000585876 ANKRD30AQ9BXX3 1397 aa17.84■□□□□ 0.45
LRFN3-202ENST00000585876 FAM50AQ14320 339 aaKnown RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms