RNA–Protein interactions for RNA: ENST00000585867.2

RBFOX1-222, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-222ENST00000585867 TEX14Q8IWB6 1497 aa27.29■■□□□ 1.96
RBFOX1-222ENST00000585867 ARHGAP5Q13017 1502 aa27.29■■□□□ 1.96
RBFOX1-222ENST00000585867 EFCAB2Q5VUJ9 269 aa27.29■■□□□ 1.96
RBFOX1-222ENST00000585867 CFDP1Q9UEE9 299 aaPredicted RBP27.29■■□□□ 1.96
RBFOX1-222ENST00000585867 ARAP3Q8WWN8 1544 aa27.28■■□□□ 1.96
RBFOX1-222ENST00000585867 ITSN2Q9NZM3 1697 aa27.28■■□□□ 1.96
RBFOX1-222ENST00000585867 FANCAO15360 1455 aa27.27■■□□□ 1.96
RBFOX1-222ENST00000585867 MYOM3Q5VTT5 1437 aa27.26■■□□□ 1.95
RBFOX1-222ENST00000585867 ZNF777Q9ULD5 760 aaPredicted RBP27.25■■□□□ 1.95
RBFOX1-222ENST00000585867 NEO1Q92859 1461 aa27.21■■□□□ 1.95
RBFOX1-222ENST00000585867 CFAP74Q9C0B2 1584 aa27.2■■□□□ 1.95
RBFOX1-222ENST00000585867 AKNAQ7Z591 1439 aa27.2■■□□□ 1.94
RBFOX1-222ENST00000585867 MIA2Q96PC5 1412 aa27.19■■□□□ 1.94
RBFOX1-222ENST00000585867 ZNF644Q9H582 1327 aaPredicted RBP27.17■■□□□ 1.94
RBFOX1-222ENST00000585867 FGD6Q6ZV73 1430 aa27.16■■□□□ 1.94
RBFOX1-222ENST00000585867 SAMD9LQ8IVG5 1584 aa27.14■■□□□ 1.94
RBFOX1-222ENST00000585867 ADGRL1O94910 1474 aa27.13■■□□□ 1.93
RBFOX1-222ENST00000585867 SCAPERQ9BY12 1400 aa27.11■■□□□ 1.93
RBFOX1-222ENST00000585867 RRBP1Q9P2E9 1410 aaKnown RBP27.1■■□□□ 1.93
RBFOX1-222ENST00000585867 PTPN23Q9H3S7 1636 aa27.1■■□□□ 1.93
RBFOX1-222ENST00000585867 CAMSAP2Q08AD1 1489 aa27.1■■□□□ 1.93
RBFOX1-222ENST00000585867 PLEKHH2Q8IVE3 1493 aa27.09■■□□□ 1.93
RBFOX1-222ENST00000585867 HNRNPMP52272 730 aaKnown RBP eCLIP27.09■■□□□ 1.93
RBFOX1-222ENST00000585867 ABCC1P33527 1531 aa27.08■■□□□ 1.93
RBFOX1-222ENST00000585867 KIAA1107Q9UPP5 1409 aa27.07■■□□□ 1.92
RBFOX1-222ENST00000585867 COL17A1Q9UMD9 1497 aaPredicted RBP27.07■■□□□ 1.92
RBFOX1-222ENST00000585867 ARHGEF12Q9NZN5 1544 aa27.07■■□□□ 1.92
RBFOX1-222ENST00000585867 FAM50AQ14320 339 aaKnown RBP27.06■■□□□ 1.92
RBFOX1-222ENST00000585867 TCOF1Q13428 1488 aaKnown RBP27.06■■□□□ 1.92
RBFOX1-222ENST00000585867 DENND4BO75064 1496 aaPredicted RBP27.05■■□□□ 1.92
RBFOX1-222ENST00000585867 SYCP2Q9BX26 1530 aa27.05■■□□□ 1.92
RBFOX1-222ENST00000585867 RAPGEF3O95398 923 aa27.04■■□□□ 1.92
RBFOX1-222ENST00000585867 KDM6BO15054 1643 aa27.03■■□□□ 1.92
RBFOX1-222ENST00000585867 MBD5Q9P267 1494 aa27.01■■□□□ 1.91
RBFOX1-222ENST00000585867 TRAPPC8Q9Y2L5 1435 aa27.01■■□□□ 1.91
RBFOX1-222ENST00000585867 AFAP1Q8N556 730 aa27.01■■□□□ 1.91
RBFOX1-222ENST00000585867 POGZQ7Z3K3 1410 aa26.99■■□□□ 1.91
RBFOX1-222ENST00000585867 RSPH4AQ5TD94 716 aa26.98■■□□□ 1.91
RBFOX1-222ENST00000585867 ZNF518AQ6AHZ1 1483 aa26.96■■□□□ 1.91
RBFOX1-222ENST00000585867 RICTORQ6R327 1708 aa26.96■■□□□ 1.91
RBFOX1-222ENST00000585867 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.96■■□□□ 1.91
RBFOX1-222ENST00000585867 ARHGEF5Q12774 1597 aa26.95■■□□□ 1.91
RBFOX1-222ENST00000585867 FRMPD1Q5SYB0 1578 aa26.94■■□□□ 1.9
RBFOX1-222ENST00000585867 CCDC141Q6ZP82 1450 aa26.93■■□□□ 1.9
RBFOX1-222ENST00000585867 TSPY4P0CV99 314 aa26.91■■□□□ 1.9
RBFOX1-222ENST00000585867 TSPY10P0CW01 314 aa26.91■■□□□ 1.9
RBFOX1-222ENST00000585867 ABCC5O15440 1437 aa26.9■■□□□ 1.9
RBFOX1-222ENST00000585867 MYT1LQ9UL68 1186 aa26.9■■□□□ 1.9
RBFOX1-222ENST00000585867 DNMT1P26358 1616 aaKnown RBP26.9■■□□□ 1.9
RBFOX1-222ENST00000585867 DAPK1P53355 1430 aa26.89■■□□□ 1.9
RBFOX1-222ENST00000585867 SPAG9O60271 1321 aaKnown RBP26.89■■□□□ 1.9
RBFOX1-222ENST00000585867 KDM5CP41229 1560 aa26.89■■□□□ 1.89
RBFOX1-222ENST00000585867 ITGAEP38570 1179 aa26.88■■□□□ 1.89
RBFOX1-222ENST00000585867 ZMYM4Q5VZL5 1548 aa26.86■■□□□ 1.89
RBFOX1-222ENST00000585867 MLH3Q9UHC1 1453 aa26.84■■□□□ 1.89
RBFOX1-222ENST00000585867 CHIC2Q9UKJ5 165 aa26.83■■□□□ 1.89
RBFOX1-222ENST00000585867 CROCC2H7BZ55 1655 aa26.82■■□□□ 1.88
RBFOX1-222ENST00000585867 HECW2Q9P2P5 1572 aa26.82■■□□□ 1.88
RBFOX1-222ENST00000585867 MAGI2Q86UL8 1455 aa26.81■■□□□ 1.88
RBFOX1-222ENST00000585867 C9orf84Q5VXU9 1444 aa26.81■■□□□ 1.88
RBFOX1-222ENST00000585867 RTEL1-TNFRSF6BF6WH68 1400 aa26.81■■□□□ 1.88
RBFOX1-222ENST00000585867 SHANK2Q9UPX8 1470 aa26.8■■□□□ 1.88
RBFOX1-222ENST00000585867 PTPRKQ15262 1439 aa26.8■■□□□ 1.88
RBFOX1-222ENST00000585867 ATP7AQ04656 1500 aa26.8■■□□□ 1.88
RBFOX1-222ENST00000585867 KIDINS220Q9ULH0 1771 aa26.8■■□□□ 1.88
RBFOX1-222ENST00000585867 INO80Q9ULG1 1556 aaPredicted RBP26.79■■□□□ 1.88
RBFOX1-222ENST00000585867 MAST1Q9Y2H9 1570 aa26.79■■□□□ 1.88
RBFOX1-222ENST00000585867 YEATS2Q9ULM3 1422 aa26.79■■□□□ 1.88
RBFOX1-222ENST00000585867 ZFYVE16Q7Z3T8 1539 aa26.78■■□□□ 1.88
RBFOX1-222ENST00000585867 ANKRD30AQ9BXX3 1397 aa26.72■■□□□ 1.87
RBFOX1-222ENST00000585867 ABCA6Q8N139 1617 aa26.72■■□□□ 1.87
RBFOX1-222ENST00000585867 RRP7BPQ9NSQ0 103 aa26.71■■□□□ 1.87
RBFOX1-222ENST00000585867 DIP2CQ9Y2E4 1556 aa26.7■■□□□ 1.87
RBFOX1-222ENST00000585867 ARHGEF40Q8TER5 1519 aa26.7■■□□□ 1.86
RBFOX1-222ENST00000585867 NCOA1Q15788 1441 aa26.7■■□□□ 1.86
RBFOX1-222ENST00000585867 ATP10AO60312 1499 aa26.7■■□□□ 1.86
RBFOX1-222ENST00000585867 ADGRL2O95490 1459 aa26.7■■□□□ 1.86
RBFOX1-222ENST00000585867 ADGBQ8N7X0 1667 aa26.69■■□□□ 1.86
RBFOX1-222ENST00000585867 PLXNC1O60486 1568 aa26.68■■□□□ 1.86
RBFOX1-222ENST00000585867 ROCK1Q13464 1354 aa26.67■■□□□ 1.86
RBFOX1-222ENST00000585867 KIF15Q9NS87 1388 aa26.65■■□□□ 1.86
RBFOX1-222ENST00000585867 A2MP01023 1474 aa26.63■■□□□ 1.85
RBFOX1-222ENST00000585867 DHX29Q7Z478 1369 aaKnown RBP26.63■■□□□ 1.85
RBFOX1-222ENST00000585867 DUOX2Q9NRD8 1548 aa26.6■■□□□ 1.85
RBFOX1-222ENST00000585867 REREQ9P2R6 1566 aa26.59■■□□□ 1.85
RBFOX1-222ENST00000585867 ARID4BQ4LE39 1312 aaPredicted RBP26.56■■□□□ 1.84
RBFOX1-222ENST00000585867 SIGLEC1Q9BZZ2 1709 aa26.55■■□□□ 1.84
RBFOX1-222ENST00000585867 HFM1A2PYH4 1435 aa26.54■■□□□ 1.84
RBFOX1-222ENST00000585867 NAIPQ13075 1403 aa26.54■■□□□ 1.84
RBFOX1-222ENST00000585867 ANKRD50Q9ULJ7 1429 aa26.54■■□□□ 1.84
RBFOX1-222ENST00000585867 ERBINQ96RT1 1412 aa26.52■■□□□ 1.84
RBFOX1-222ENST00000585867 KIF3BO15066 747 aa26.52■■□□□ 1.84
RBFOX1-222ENST00000585867 AGLP35573 1532 aa26.52■■□□□ 1.84
RBFOX1-222ENST00000585867 SETD5Q9C0A6 1442 aa26.52■■□□□ 1.84
RBFOX1-222ENST00000585867 GCC2Q8IWJ2 1684 aa26.5■■□□□ 1.83
RBFOX1-222ENST00000585867 EIF2AK4Q9P2K8 1649 aaKnown RBP26.47■■□□□ 1.83
RBFOX1-222ENST00000585867 MLECQ14165 292 aa26.47■■□□□ 1.83
RBFOX1-222ENST00000585867 GGT6Q6P531 493 aa26.46■■□□□ 1.83
RBFOX1-222ENST00000585867 HRCP23327 699 aa26.44■■□□□ 1.82
RBFOX1-222ENST00000585867 CCER1Q8TC90 406 aaPredicted RBP26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms