RNA–Protein interactions for RNA: ENST00000585741.1

HMG20B-215, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-215ENST00000585741 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.09■■□□□ 1.77
HMG20B-215ENST00000585741 BCORL1Q5H9F3 1711 aa26.07■■□□□ 1.76
HMG20B-215ENST00000585741 AKNAQ7Z591 1439 aa26.06■■□□□ 1.76
HMG20B-215ENST00000585741 RICTORQ6R327 1708 aa26.05■■□□□ 1.76
HMG20B-215ENST00000585741 DENND4BO75064 1496 aaPredicted RBP26.04■■□□□ 1.76
HMG20B-215ENST00000585741 TTC37Q6PGP7 1564 aa26.03■■□□□ 1.76
HMG20B-215ENST00000585741 FANCAO15360 1455 aa26.03■■□□□ 1.76
HMG20B-215ENST00000585741 ARHGEF40Q8TER5 1519 aa26.03■■□□□ 1.76
HMG20B-215ENST00000585741 MADDQ8WXG6 1647 aa26.01■■□□□ 1.75
HMG20B-215ENST00000585741 SUPT6HQ7KZ85 1726 aaKnown RBP26■■□□□ 1.75
HMG20B-215ENST00000585741 KIF14Q15058 1648 aa26■■□□□ 1.75
HMG20B-215ENST00000585741 ZMYM4Q5VZL5 1548 aa25.97■■□□□ 1.75
HMG20B-215ENST00000585741 ARID4BQ4LE39 1312 aaPredicted RBP25.96■■□□□ 1.75
HMG20B-215ENST00000585741 CFAP74Q9C0B2 1584 aa25.96■■□□□ 1.75
HMG20B-215ENST00000585741 NCOA2Q15596 1464 aa25.96■■□□□ 1.75
HMG20B-215ENST00000585741 CCNB3Q8WWL7 1395 aa25.95■■□□□ 1.74
HMG20B-215ENST00000585741 SIGLEC1Q9BZZ2 1709 aa25.94■■□□□ 1.74
HMG20B-215ENST00000585741 YEATS2Q9ULM3 1422 aa25.93■■□□□ 1.74
HMG20B-215ENST00000585741 PLCH2O75038 1416 aa25.92■■□□□ 1.74
HMG20B-215ENST00000585741 LMTK3Q96Q04 1460 aa25.91■■□□□ 1.74
HMG20B-215ENST00000585741 ZFYVE16Q7Z3T8 1539 aa25.88■■□□□ 1.73
HMG20B-215ENST00000585741 RIMS1Q86UR5 1692 aaKnown RBP25.88■■□□□ 1.73
HMG20B-215ENST00000585741 MAGI2Q86UL8 1455 aa25.88■■□□□ 1.73
HMG20B-215ENST00000585741 POGZQ7Z3K3 1410 aa25.87■■□□□ 1.73
HMG20B-215ENST00000585741 SCAPERQ9BY12 1400 aa25.86■■□□□ 1.73
HMG20B-215ENST00000585741 MYOM3Q5VTT5 1437 aa25.83■■□□□ 1.73
HMG20B-215ENST00000585741 CFDP1Q9UEE9 299 aaPredicted RBP25.83■■□□□ 1.73
HMG20B-215ENST00000585741 FBXO41Q8TF61 875 aa25.79■■□□□ 1.72
HMG20B-215ENST00000585741 ZNF777Q9ULD5 760 aaPredicted RBP25.79■■□□□ 1.72
HMG20B-215ENST00000585741 ITSN2Q9NZM3 1697 aa25.79■■□□□ 1.72
HMG20B-215ENST00000585741 GPATCH8Q9UKJ3 1502 aaKnown RBP25.78■■□□□ 1.72
HMG20B-215ENST00000585741 FAM50AQ14320 339 aaKnown RBP25.76■■□□□ 1.71
HMG20B-215ENST00000585741 EFCAB2Q5VUJ9 269 aa25.76■■□□□ 1.71
HMG20B-215ENST00000585741 MYO5CQ9NQX4 1742 aa25.76■■□□□ 1.71
HMG20B-215ENST00000585741 ARHGAP5Q13017 1502 aa25.75■■□□□ 1.71
HMG20B-215ENST00000585741 FGD6Q6ZV73 1430 aa25.75■■□□□ 1.71
HMG20B-215ENST00000585741 MIA2Q96PC5 1412 aa25.75■■□□□ 1.71
HMG20B-215ENST00000585741 ATP10AO60312 1499 aa25.74■■□□□ 1.71
HMG20B-215ENST00000585741 MLECQ14165 292 aa25.73■■□□□ 1.71
HMG20B-215ENST00000585741 HSPA2P54652 639 aa25.72■■□□□ 1.71
HMG20B-215ENST00000585741 ARHGEF12Q9NZN5 1544 aa25.72■■□□□ 1.71
HMG20B-215ENST00000585741 CDC42BPAQ5VT25 1732 aa25.71■■□□□ 1.71
HMG20B-215ENST00000585741 PREX2Q70Z35 1606 aa25.71■■□□□ 1.71
HMG20B-215ENST00000585741 TRIM26Q12899 539 aaPredicted RBP25.71■■□□□ 1.71
HMG20B-215ENST00000585741 C9orf84Q5VXU9 1444 aa25.71■■□□□ 1.71
HMG20B-215ENST00000585741 PLPPR3Q6T4P5 718 aa25.69■■□□□ 1.7
HMG20B-215ENST00000585741 FER1L4A9Z1Z3 1794 aa25.69■■□□□ 1.7
HMG20B-215ENST00000585741 KDM5CP41229 1560 aa25.69■■□□□ 1.7
HMG20B-215ENST00000585741 AFAP1Q8N556 730 aa25.68■■□□□ 1.7
HMG20B-215ENST00000585741 RRBP1Q9P2E9 1410 aaKnown RBP25.68■■□□□ 1.7
HMG20B-215ENST00000585741 ZNF518AQ6AHZ1 1483 aa25.66■■□□□ 1.7
HMG20B-215ENST00000585741 PTPN23Q9H3S7 1636 aa25.66■■□□□ 1.7
HMG20B-215ENST00000585741 CDC42BPBQ9Y5S2 1711 aa25.64■■□□□ 1.7
HMG20B-215ENST00000585741 CAMSAP2Q08AD1 1489 aa25.62■■□□□ 1.69
HMG20B-215ENST00000585741 ZNF644Q9H582 1327 aaPredicted RBP25.62■■□□□ 1.69
HMG20B-215ENST00000585741 PLEKHH2Q8IVE3 1493 aa25.61■■□□□ 1.69
HMG20B-215ENST00000585741 TCOF1Q13428 1488 aaKnown RBP25.6■■□□□ 1.69
HMG20B-215ENST00000585741 ITGAEP38570 1179 aa25.6■■□□□ 1.69
HMG20B-215ENST00000585741 DIP2CQ9Y2E4 1556 aa25.6■■□□□ 1.69
HMG20B-215ENST00000585741 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.59■■□□□ 1.693e-6■□□□□ 10.4
HMG20B-215ENST00000585741 CEBPAP49715 358 aaPredicted RBP25.58■■□□□ 1.69
HMG20B-215ENST00000585741 MLH3Q9UHC1 1453 aa25.58■■□□□ 1.69
HMG20B-215ENST00000585741 REREQ9P2R6 1566 aa25.57■■□□□ 1.68
HMG20B-215ENST00000585741 TRAPPC8Q9Y2L5 1435 aa25.56■■□□□ 1.68
HMG20B-215ENST00000585741 ABCA6Q8N139 1617 aa25.55■■□□□ 1.68
HMG20B-215ENST00000585741 ABCC1P33527 1531 aa25.55■■□□□ 1.68
HMG20B-215ENST00000585741 HNRNPMP52272 730 aaKnown RBP eCLIP25.55■■□□□ 1.68
HMG20B-215ENST00000585741 RSPH4AQ5TD94 716 aa25.55■■□□□ 1.68
HMG20B-215ENST00000585741 SAMD9LQ8IVG5 1584 aa25.55■■□□□ 1.68
HMG20B-215ENST00000585741 KIAA1107Q9UPP5 1409 aa25.53■■□□□ 1.68
HMG20B-215ENST00000585741 PREX1Q8TCU6 1659 aa25.52■■□□□ 1.68
HMG20B-215ENST00000585741 TSPY4P0CV99 314 aa25.51■■□□□ 1.67
HMG20B-215ENST00000585741 TSPY10P0CW01 314 aa25.51■■□□□ 1.67
HMG20B-215ENST00000585741 SYCP2Q9BX26 1530 aa25.5■■□□□ 1.67
HMG20B-215ENST00000585741 AGLP35573 1532 aa25.49■■□□□ 1.67
HMG20B-215ENST00000585741 PCGF6Q9BYE7 350 aa25.49■■□□□ 1.67
HMG20B-215ENST00000585741 MYT1LQ9UL68 1186 aa25.48■■□□□ 1.67
HMG20B-215ENST00000585741 CERKQ8TCT0 537 aa25.47■■□□□ 1.67
HMG20B-215ENST00000585741 KIDINS220Q9ULH0 1771 aa25.46■■□□□ 1.67
HMG20B-215ENST00000585741 CCDC141Q6ZP82 1450 aa25.46■■□□□ 1.67
HMG20B-215ENST00000585741 DAPK1P53355 1430 aa25.46■■□□□ 1.67
HMG20B-215ENST00000585741 STRCQ7RTU9 1775 aa25.44■■□□□ 1.66
HMG20B-215ENST00000585741 ARHGEF5Q12774 1597 aa25.44■■□□□ 1.66
HMG20B-215ENST00000585741 CHIC2Q9UKJ5 165 aa25.43■■□□□ 1.66
HMG20B-215ENST00000585741 DNMT1P26358 1616 aaKnown RBP25.43■■□□□ 1.66
HMG20B-215ENST00000585741 MBD5Q9P267 1494 aa25.42■■□□□ 1.66
HMG20B-215ENST00000585741 ABCC5O15440 1437 aa25.42■■□□□ 1.66
HMG20B-215ENST00000585741 C3P01024 1663 aa25.42■■□□□ 1.66
HMG20B-215ENST00000585741 UHRF1BP1Q6BDS2 1440 aa25.41■■□□□ 1.66
HMG20B-215ENST00000585741 SETD1BQ9UPS6 1966 aaKnown RBP25.41■■□□□ 1.66
HMG20B-215ENST00000585741 SPAG9O60271 1321 aaKnown RBP25.39■■□□□ 1.66
HMG20B-215ENST00000585741 SHANK2Q9UPX8 1470 aa25.35■■□□□ 1.65
HMG20B-215ENST00000585741 ANKRD30AQ9BXX3 1397 aa25.34■■□□□ 1.65
HMG20B-215ENST00000585741 PTPRKQ15262 1439 aa25.32■■□□□ 1.64
HMG20B-215ENST00000585741 DMRT2Q9Y5R5 561 aa25.32■■□□□ 1.64
HMG20B-215ENST00000585741 CROCC2H7BZ55 1655 aa25.32■■□□□ 1.64
HMG20B-215ENST00000585741 CNTLNQ9NXG0 1405 aa25.31■■□□□ 1.64
HMG20B-215ENST00000585741 RRP7BPQ9NSQ0 103 aa25.31■■□□□ 1.64
HMG20B-215ENST00000585741 PTPRTO14522 1441 aa25.29■■□□□ 1.64
HMG20B-215ENST00000585741 ROCK1Q13464 1354 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms