RNA–Protein interactions for RNA: ENST00000585098.5

NDEL1-219, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3 BASIC

Gene NDEL1, Length 454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-219ENST00000585098 KDM4FA0A1W2PPD8 638 aa37.57■■■■□ 3.6
NDEL1-219ENST00000585098 RICTORQ6R327 1708 aa37.56■■■■□ 3.6
NDEL1-219ENST00000585098 PREX2Q70Z35 1606 aa37.54■■■■□ 3.6
NDEL1-219ENST00000585098 CDC42BPBQ9Y5S2 1711 aa37.53■■■■□ 3.6
NDEL1-219ENST00000585098 EHBP1L1Q8N3D4 1523 aa37.51■■■■□ 3.6
NDEL1-219ENST00000585098 POGZQ7Z3K3 1410 aa37.5■■■■□ 3.59
NDEL1-219ENST00000585098 CDC42BPAQ5VT25 1732 aa37.48■■■■□ 3.59
NDEL1-219ENST00000585098 GPATCH8Q9UKJ3 1502 aaKnown RBP37.48■■■■□ 3.59
NDEL1-219ENST00000585098 TIAM1Q13009 1591 aa37.46■■■■□ 3.59
NDEL1-219ENST00000585098 CCNB3Q8WWL7 1395 aa37.45■■■■□ 3.59
NDEL1-219ENST00000585098 ZMYM4Q5VZL5 1548 aa37.45■■■■□ 3.59
NDEL1-219ENST00000585098 ZNF777Q9ULD5 760 aaPredicted RBP37.4■■■■□ 3.58
NDEL1-219ENST00000585098 ARHGEF40Q8TER5 1519 aa37.38■■■■□ 3.57
NDEL1-219ENST00000585098 CFDP1Q9UEE9 299 aaPredicted RBP37.38■■■■□ 3.57
NDEL1-219ENST00000585098 ZNF518AQ6AHZ1 1483 aa37.38■■■■□ 3.57
NDEL1-219ENST00000585098 MAGI2Q86UL8 1455 aa37.38■■■■□ 3.57
NDEL1-219ENST00000585098 ABCC1P33527 1531 aa37.37■■■■□ 3.57
NDEL1-219ENST00000585098 AFAP1Q8N556 730 aa37.37■■■■□ 3.57
NDEL1-219ENST00000585098 YEATS2Q9ULM3 1422 aa37.36■■■■□ 3.57
NDEL1-219ENST00000585098 ZFYVE16Q7Z3T8 1539 aa37.36■■■■□ 3.57
NDEL1-219ENST00000585098 MAP3K1Q13233 1512 aa37.34■■■■□ 3.57
NDEL1-219ENST00000585098 ARHGEF12Q9NZN5 1544 aa37.34■■■■□ 3.57
NDEL1-219ENST00000585098 LRRC9Q6ZRR7 1453 aa37.33■■■■□ 3.57
NDEL1-219ENST00000585098 SAMD9LQ8IVG5 1584 aa37.31■■■■□ 3.56
NDEL1-219ENST00000585098 NCOA2Q15596 1464 aa37.31■■■■□ 3.56
NDEL1-219ENST00000585098 TRAPPC8Q9Y2L5 1435 aa37.3■■■■□ 3.56
NDEL1-219ENST00000585098 SUPT6HQ7KZ85 1726 aaKnown RBP37.3■■■■□ 3.56
NDEL1-219ENST00000585098 KANK4Q5T7N3 995 aaPredicted RBP37.29■■■■□ 3.56
NDEL1-219ENST00000585098 ARID4BQ4LE39 1312 aaPredicted RBP37.29■■■■□ 3.56
NDEL1-219ENST00000585098 KDM5CP41229 1560 aa37.29■■■■□ 3.56
NDEL1-219ENST00000585098 ITSN2Q9NZM3 1697 aa37.28■■■■□ 3.56
NDEL1-219ENST00000585098 APLP2Q06481 763 aa37.25■■■■□ 3.55
NDEL1-219ENST00000585098 MYT1LQ9UL68 1186 aa37.25■■■■□ 3.55
NDEL1-219ENST00000585098 HNRNPMP52272 730 aaKnown RBP eCLIP37.23■■■■□ 3.556e-7■■■■□ 23.7
NDEL1-219ENST00000585098 SYCP2Q9BX26 1530 aa37.23■■■■□ 3.55
NDEL1-219ENST00000585098 PLEKHH2Q8IVE3 1493 aa37.21■■■■□ 3.55
NDEL1-219ENST00000585098 KIAA1107Q9UPP5 1409 aa37.2■■■■□ 3.55
NDEL1-219ENST00000585098 HECW2Q9P2P5 1572 aa37.2■■■■□ 3.55
NDEL1-219ENST00000585098 ZNF644Q9H582 1327 aaPredicted RBP37.19■■■■□ 3.54
NDEL1-219ENST00000585098 ATP10AO60312 1499 aa37.19■■■■□ 3.54
NDEL1-219ENST00000585098 MLH3Q9UHC1 1453 aa37.19■■■■□ 3.54
NDEL1-219ENST00000585098 C9orf84Q5VXU9 1444 aa37.14■■■■□ 3.54
NDEL1-219ENST00000585098 BCORL1Q5H9F3 1711 aa37.12■■■■□ 3.53
NDEL1-219ENST00000585098 SIGLEC1Q9BZZ2 1709 aa37.1■■■■□ 3.53
NDEL1-219ENST00000585098 ADAMTSL3P82987 1691 aa37.09■■■■□ 3.53
NDEL1-219ENST00000585098 DIP2CQ9Y2E4 1556 aa37.09■■■■□ 3.53
NDEL1-219ENST00000585098 SPAG9O60271 1321 aaKnown RBP37.09■■■■□ 3.53
NDEL1-219ENST00000585098 ABCA6Q8N139 1617 aa37.07■■■■□ 3.52
NDEL1-219ENST00000585098 MBD5Q9P267 1494 aa37.05■■■■□ 3.52
NDEL1-219ENST00000585098 KIDINS220Q9ULH0 1771 aa37.04■■■■□ 3.52
NDEL1-219ENST00000585098 CAMSAP2Q08AD1 1489 aa37.04■■■■□ 3.52
NDEL1-219ENST00000585098 MLECQ14165 292 aa37.03■■■■□ 3.52
NDEL1-219ENST00000585098 MADDQ8WXG6 1647 aa36.99■■■■□ 3.51
NDEL1-219ENST00000585098 MYOM3Q5VTT5 1437 aa36.99■■■■□ 3.51
NDEL1-219ENST00000585098 REREQ9P2R6 1566 aa36.98■■■■□ 3.51
NDEL1-219ENST00000585098 ATP7AQ04656 1500 aa36.97■■■■□ 3.51
NDEL1-219ENST00000585098 PTPRMP28827 1452 aa36.95■■■■□ 3.51
NDEL1-219ENST00000585098 INO80Q9ULG1 1556 aaPredicted RBP36.95■■■■□ 3.51
NDEL1-219ENST00000585098 MIA2Q96PC5 1412 aa36.93■■■■□ 3.5
NDEL1-219ENST00000585098 CCDC141Q6ZP82 1450 aa36.92■■■■□ 3.5
NDEL1-219ENST00000585098 RSPH4AQ5TD94 716 aa36.91■■■■□ 3.5
NDEL1-219ENST00000585098 AGLP35573 1532 aa36.88■■■■□ 3.49
NDEL1-219ENST00000585098 RIMS1Q86UR5 1692 aaKnown RBP36.87■■■■□ 3.49
NDEL1-219ENST00000585098 RTEL1-TNFRSF6BF6WH68 1400 aa36.85■■■■□ 3.49
NDEL1-219ENST00000585098 ARHGEF5Q12774 1597 aa36.85■■■■□ 3.49
NDEL1-219ENST00000585098 A2MP01023 1474 aa36.82■■■■□ 3.48
NDEL1-219ENST00000585098 FER1L4A9Z1Z3 1794 aa36.8■■■■□ 3.48
NDEL1-219ENST00000585098 TSPY4P0CV99 314 aa36.79■■■■□ 3.48
NDEL1-219ENST00000585098 TSPY10P0CW01 314 aa36.79■■■■□ 3.48
NDEL1-219ENST00000585098 PLPPR3Q6T4P5 718 aa36.77■■■■□ 3.48
NDEL1-219ENST00000585098 FGD6Q6ZV73 1430 aa36.76■■■■□ 3.47
NDEL1-219ENST00000585098 PLXNC1O60486 1568 aa36.75■■■■□ 3.47
NDEL1-219ENST00000585098 PTPN23Q9H3S7 1636 aa36.74■■■■□ 3.47
NDEL1-219ENST00000585098 ADGBQ8N7X0 1667 aa36.74■■■■□ 3.47
NDEL1-219ENST00000585098 ESF1Q9H501 851 aaKnown RBP36.69■■■■□ 3.46
NDEL1-219ENST00000585098 DHX29Q7Z478 1369 aaKnown RBP36.68■■■■□ 3.46
NDEL1-219ENST00000585098 TCOF1Q13428 1488 aaKnown RBP36.67■■■■□ 3.46
NDEL1-219ENST00000585098 MAST1Q9Y2H9 1570 aa36.65■■■■□ 3.46
NDEL1-219ENST00000585098 CEBPAP49715 358 aaPredicted RBP36.63■■■■□ 3.45
NDEL1-219ENST00000585098 GGT6Q6P531 493 aa36.62■■■■□ 3.45
NDEL1-219ENST00000585098 PPARGC1BQ86YN6 1023 aaKnown RBP36.62■■■■□ 3.45
NDEL1-219ENST00000585098 ABCC5O15440 1437 aa36.61■■■■□ 3.45
NDEL1-219ENST00000585098 CNTLNQ9NXG0 1405 aa36.58■■■■□ 3.45
NDEL1-219ENST00000585098 DAPK1P53355 1430 aa36.57■■■■□ 3.44
NDEL1-219ENST00000585098 KIF3BO15066 747 aa36.56■■■■□ 3.44
NDEL1-219ENST00000585098 FAM50AQ14320 339 aaKnown RBP36.55■■■■□ 3.44
NDEL1-219ENST00000585098 SHANK2Q9UPX8 1470 aa36.55■■■■□ 3.44
NDEL1-219ENST00000585098 DNMT1P26358 1616 aaKnown RBP36.54■■■■□ 3.44
NDEL1-219ENST00000585098 CROCC2H7BZ55 1655 aa36.51■■■■□ 3.44
NDEL1-219ENST00000585098 PPP6R1Q9UPN7 881 aa36.5■■■■□ 3.43
NDEL1-219ENST00000585098 LMTK3Q96Q04 1460 aa36.49■■■■□ 3.43
NDEL1-219ENST00000585098 C3P01024 1663 aa36.48■■■■□ 3.43
NDEL1-219ENST00000585098 ZMYM3Q14202 1370 aa36.45■■■■□ 3.43
NDEL1-219ENST00000585098 CHIC2Q9UKJ5 165 aa36.45■■■■□ 3.43
NDEL1-219ENST00000585098 KIF15Q9NS87 1388 aa36.44■■■■□ 3.42
NDEL1-219ENST00000585098 RRP7BPQ9NSQ0 103 aa36.44■■■■□ 3.42
NDEL1-219ENST00000585098 CLTCQ00610 1675 aaKnown RBP36.44■■■■□ 3.42
NDEL1-219ENST00000585098 MROH2AA6NES4 1674 aa36.43■■■■□ 3.42
NDEL1-219ENST00000585098 DUOX2Q9NRD8 1548 aa36.42■■■■□ 3.42
NDEL1-219ENST00000585098 ANKRD30AQ9BXX3 1397 aa36.38■■■■□ 3.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms