RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 YEATS2Q9ULM3 1422 aa28.84■■■□□ 2.21
ERBB2-221ENST00000584888 PCF11O94913 1555 aaKnown RBP28.84■■■□□ 2.21
ERBB2-221ENST00000584888 POGZQ7Z3K3 1410 aa28.83■■■□□ 2.21
ERBB2-221ENST00000584888 MAGI2Q86UL8 1455 aa28.83■■■□□ 2.21
ERBB2-221ENST00000584888 MYO5CQ9NQX4 1742 aa28.82■■■□□ 2.2
ERBB2-221ENST00000584888 ZFYVE16Q7Z3T8 1539 aa28.81■■■□□ 2.2
ERBB2-221ENST00000584888 MADDQ8WXG6 1647 aa28.77■■■□□ 2.2
ERBB2-221ENST00000584888 CCDC18Q5T9S5 1454 aa28.77■■■□□ 2.2
ERBB2-221ENST00000584888 FYCO1Q9BQS8 1478 aa28.77■■■□□ 2.2
ERBB2-221ENST00000584888 LOC105371045A0A1W2PR82 267 aa28.76■■■□□ 2.19
ERBB2-221ENST00000584888 CEP162Q5TB80 1403 aa28.76■■■□□ 2.19
ERBB2-221ENST00000584888 ARHGAP5Q13017 1502 aa28.75■■■□□ 2.19
ERBB2-221ENST00000584888 SIGLEC1Q9BZZ2 1709 aa28.7■■■□□ 2.19
ERBB2-221ENST00000584888 AFAP1Q8N556 730 aa28.7■■■□□ 2.18
ERBB2-221ENST00000584888 ATP10AO60312 1499 aa28.68■■■□□ 2.18
ERBB2-221ENST00000584888 MLECQ14165 292 aa28.68■■■□□ 2.18
ERBB2-221ENST00000584888 ZNF518AQ6AHZ1 1483 aa28.67■■■□□ 2.18
ERBB2-221ENST00000584888 RIMS1Q86UR5 1692 aaKnown RBP28.67■■■□□ 2.18
ERBB2-221ENST00000584888 CDC42BPBQ9Y5S2 1711 aa28.64■■■□□ 2.18
ERBB2-221ENST00000584888 ILDR1Q86SU0 546 aaPredicted RBP28.64■■■□□ 2.18
ERBB2-221ENST00000584888 C9orf84Q5VXU9 1444 aa28.63■■■□□ 2.17
ERBB2-221ENST00000584888 MYT1LQ9UL68 1186 aa28.62■■■□□ 2.17
ERBB2-221ENST00000584888 PLPPR3Q6T4P5 718 aa28.61■■■□□ 2.17
ERBB2-221ENST00000584888 KDM5CP41229 1560 aa28.61■■■□□ 2.17
ERBB2-221ENST00000584888 PREX2Q70Z35 1606 aa28.6■■■□□ 2.17
ERBB2-221ENST00000584888 TRAPPC8Q9Y2L5 1435 aa28.57■■■□□ 2.16
ERBB2-221ENST00000584888 LMTK3Q96Q04 1460 aa28.57■■■□□ 2.16
ERBB2-221ENST00000584888 ARHGEF12Q9NZN5 1544 aa28.57■■■□□ 2.16
ERBB2-221ENST00000584888 ABCC1P33527 1531 aa28.54■■■□□ 2.16
ERBB2-221ENST00000584888 MLH3Q9UHC1 1453 aa28.53■■■□□ 2.16
ERBB2-221ENST00000584888 CDC42BPAQ5VT25 1732 aa28.52■■■□□ 2.16
ERBB2-221ENST00000584888 ZNF777Q9ULD5 760 aaPredicted RBP28.51■■■□□ 2.15
ERBB2-221ENST00000584888 FER1L4A9Z1Z3 1794 aa28.51■■■□□ 2.15
ERBB2-221ENST00000584888 GPATCH8Q9UKJ3 1502 aaKnown RBP28.5■■■□□ 2.15
ERBB2-221ENST00000584888 DIP2CQ9Y2E4 1556 aa28.5■■■□□ 2.15
ERBB2-221ENST00000584888 ITSN2Q9NZM3 1697 aa28.48■■■□□ 2.15
ERBB2-221ENST00000584888 HSPA2P54652 639 aa28.47■■■□□ 2.15
ERBB2-221ENST00000584888 MTUS2Q5JR59 1369 aa28.46■■■□□ 2.15
ERBB2-221ENST00000584888 ABCA6Q8N139 1617 aa28.45■■■□□ 2.14
ERBB2-221ENST00000584888 REREQ9P2R6 1566 aa28.45■■■□□ 2.14
ERBB2-221ENST00000584888 CEBPAP49715 358 aaPredicted RBP28.44■■■□□ 2.14
ERBB2-221ENST00000584888 VPS8Q8N3P4 1428 aa28.43■■■□□ 2.14
ERBB2-221ENST00000584888 HNRNPMP52272 730 aaKnown RBP eCLIP28.43■■■□□ 2.14
ERBB2-221ENST00000584888 CFDP1Q9UEE9 299 aaPredicted RBP28.43■■■□□ 2.14
ERBB2-221ENST00000584888 SAMD9LQ8IVG5 1584 aa28.42■■■□□ 2.14
ERBB2-221ENST00000584888 CCNB3Q8WWL7 1395 aa28.42■■■□□ 2.14
ERBB2-221ENST00000584888 KIDINS220Q9ULH0 1771 aa28.39■■■□□ 2.14
ERBB2-221ENST00000584888 AGLP35573 1532 aa28.38■■■□□ 2.13
ERBB2-221ENST00000584888 SYCP2Q9BX26 1530 aa28.38■■■□□ 2.13
ERBB2-221ENST00000584888 KIAA1107Q9UPP5 1409 aa28.37■■■□□ 2.13
ERBB2-221ENST00000584888 SPAG9O60271 1321 aaKnown RBP28.37■■■□□ 2.13
ERBB2-221ENST00000584888 EHBP1L1Q8N3D4 1523 aa28.36■■■□□ 2.13
ERBB2-221ENST00000584888 PLEKHH2Q8IVE3 1493 aa28.34■■■□□ 2.13
ERBB2-221ENST00000584888 TIAM1Q13009 1591 aa28.33■■■□□ 2.12
ERBB2-221ENST00000584888 ESF1Q9H501 851 aaKnown RBP28.32■■■□□ 2.12
ERBB2-221ENST00000584888 ZNF644Q9H582 1327 aaPredicted RBP28.29■■■□□ 2.12
ERBB2-221ENST00000584888 MAP3K1Q13233 1512 aa28.28■■■□□ 2.12
ERBB2-221ENST00000584888 PREX1Q8TCU6 1659 aa28.26■■■□□ 2.12
ERBB2-221ENST00000584888 FBXO41Q8TF61 875 aa28.26■■■□□ 2.11
ERBB2-221ENST00000584888 ATP7AQ04656 1500 aa28.25■■■□□ 2.11
ERBB2-221ENST00000584888 SETD1BQ9UPS6 1966 aaKnown RBP28.24■■■□□ 2.11
ERBB2-221ENST00000584888 UHRF1BP1Q6BDS2 1440 aa28.23■■■□□ 2.11
ERBB2-221ENST00000584888 LRRC9Q6ZRR7 1453 aa28.22■■■□□ 2.11
ERBB2-221ENST00000584888 SUPT6HQ7KZ85 1726 aaKnown RBP28.22■■■□□ 2.11
ERBB2-221ENST00000584888 CNTLNQ9NXG0 1405 aa28.22■■■□□ 2.11
ERBB2-221ENST00000584888 NCOA2Q15596 1464 aa28.21■■■□□ 2.11
ERBB2-221ENST00000584888 C3P01024 1663 aa28.21■■■□□ 2.11
ERBB2-221ENST00000584888 INO80Q9ULG1 1556 aaPredicted RBP28.2■■■□□ 2.11
ERBB2-221ENST00000584888 A2MP01023 1474 aa28.2■■■□□ 2.1
ERBB2-221ENST00000584888 MBD5Q9P267 1494 aa28.2■■■□□ 2.1
ERBB2-221ENST00000584888 KANK4Q5T7N3 995 aaPredicted RBP28.16■■■□□ 2.1
ERBB2-221ENST00000584888 PLXNC1O60486 1568 aa28.15■■■□□ 2.1
ERBB2-221ENST00000584888 ZMYM3Q14202 1370 aa28.13■■■□□ 2.09
ERBB2-221ENST00000584888 GGT6Q6P531 493 aa28.12■■■□□ 2.09
ERBB2-221ENST00000584888 RTEL1-TNFRSF6BF6WH68 1400 aa28.11■■■□□ 2.09
ERBB2-221ENST00000584888 DMRT2Q9Y5R5 561 aa28.11■■■□□ 2.09
ERBB2-221ENST00000584888 RSPH4AQ5TD94 716 aa28.08■■■□□ 2.09
ERBB2-221ENST00000584888 MROH2AA6NES4 1674 aa28.07■■■□□ 2.08
ERBB2-221ENST00000584888 ADGBQ8N7X0 1667 aa28.07■■■□□ 2.08
ERBB2-221ENST00000584888 STRCQ7RTU9 1775 aa28.07■■■□□ 2.08
ERBB2-221ENST00000584888 CERKQ8TCT0 537 aa28.07■■■□□ 2.08
ERBB2-221ENST00000584888 NPATQ14207 1427 aa28.07■■■□□ 2.08
ERBB2-221ENST00000584888 CAMSAP2Q08AD1 1489 aa28.07■■■□□ 2.08
ERBB2-221ENST00000584888 PPP6R1Q9UPN7 881 aa28.06■■■□□ 2.08
ERBB2-221ENST00000584888 CCDC141Q6ZP82 1450 aa28.05■■■□□ 2.08
ERBB2-221ENST00000584888 DHX29Q7Z478 1369 aaKnown RBP28.05■■■□□ 2.08
ERBB2-221ENST00000584888 CLTCQ00610 1675 aaKnown RBP28.02■■■□□ 2.08
ERBB2-221ENST00000584888 APLP2Q06481 763 aa27.99■■■□□ 2.07
ERBB2-221ENST00000584888 KIF3BO15066 747 aa27.98■■■□□ 2.07
ERBB2-221ENST00000584888 TSPY4P0CV99 314 aa27.97■■■□□ 2.07
ERBB2-221ENST00000584888 TSPY10P0CW01 314 aa27.97■■■□□ 2.07
ERBB2-221ENST00000584888 PTPRTO14522 1441 aa27.97■■■□□ 2.07
ERBB2-221ENST00000584888 PTPRKQ15262 1439 aa27.97■■■□□ 2.07
ERBB2-221ENST00000584888 MYOM3Q5VTT5 1437 aa27.96■■■□□ 2.07
ERBB2-221ENST00000584888 NCOA1Q15788 1441 aa27.95■■■□□ 2.07
ERBB2-221ENST00000584888 MIA2Q96PC5 1412 aa27.95■■■□□ 2.07
ERBB2-221ENST00000584888 ARHGEF5Q12774 1597 aa27.94■■■□□ 2.06
ERBB2-221ENST00000584888 CAMSAP1Q5T5Y3 1602 aa27.9■■■□□ 2.06
ERBB2-221ENST00000584888 NCKAP5LQ9HCH0 1330 aa27.86■■■□□ 2.05
ERBB2-221ENST00000584888 WASHC2CQ9Y4E1 1318 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms