RNA–Protein interactions for RNA: ENST00000584527.1

SPECC1-223, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 3 BASIC

Gene SPECC1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-223ENST00000584527 PCF11O94913 1555 aaKnown RBP24.8■■□□□ 1.56
SPECC1-223ENST00000584527 TROQ12816 1431 aaPredicted RBP24.79■■□□□ 1.56
SPECC1-223ENST00000584527 RIMS1Q86UR5 1692 aaKnown RBP24.79■■□□□ 1.56
SPECC1-223ENST00000584527 SIGLEC1Q9BZZ2 1709 aa24.79■■□□□ 1.56
SPECC1-223ENST00000584527 LMTK3Q96Q04 1460 aa24.77■■□□□ 1.56
SPECC1-223ENST00000584527 CLIP1P30622 1438 aa24.76■■□□□ 1.55
SPECC1-223ENST00000584527 LRRIQ1Q96JM4 1722 aa24.75■■□□□ 1.55
SPECC1-223ENST00000584527 EFCAB2Q5VUJ9 269 aa24.75■■□□□ 1.55
SPECC1-223ENST00000584527 EHMT2Q96KQ7 1210 aa24.73■■□□□ 1.55
SPECC1-223ENST00000584527 KDM5CP41229 1560 aa24.72■■□□□ 1.55
SPECC1-223ENST00000584527 ZNF518AQ6AHZ1 1483 aa24.72■■□□□ 1.55
SPECC1-223ENST00000584527 ATP1B4Q9UN42 357 aaPredicted RBP24.72■■□□□ 1.55
SPECC1-223ENST00000584527 ATP10AO60312 1499 aa24.7■■□□□ 1.55
SPECC1-223ENST00000584527 CCDC18Q5T9S5 1454 aa24.7■■□□□ 1.55
SPECC1-223ENST00000584527 C9orf84Q5VXU9 1444 aa24.7■■□□□ 1.55
SPECC1-223ENST00000584527 CASKIN1Q8WXD9 1431 aa24.69■■□□□ 1.54
SPECC1-223ENST00000584527 ARHGAP5Q13017 1502 aa24.69■■□□□ 1.54
SPECC1-223ENST00000584527 ARHGEF12Q9NZN5 1544 aa24.68■■□□□ 1.54
SPECC1-223ENST00000584527 FER1L4A9Z1Z3 1794 aa24.67■■□□□ 1.54
SPECC1-223ENST00000584527 PREX2Q70Z35 1606 aa24.65■■□□□ 1.54
SPECC1-223ENST00000584527 CDC42BPBQ9Y5S2 1711 aa24.64■■□□□ 1.53
SPECC1-223ENST00000584527 REREQ9P2R6 1566 aa24.63■■□□□ 1.53
SPECC1-223ENST00000584527 FYCO1Q9BQS8 1478 aa24.62■■□□□ 1.53
SPECC1-223ENST00000584527 ABCC1P33527 1531 aa24.6■■□□□ 1.53
SPECC1-223ENST00000584527 DIP2CQ9Y2E4 1556 aa24.59■■□□□ 1.53
SPECC1-223ENST00000584527 MLH3Q9UHC1 1453 aa24.59■■□□□ 1.53
SPECC1-223ENST00000584527 FBXO41Q8TF61 875 aa24.57■■□□□ 1.52
SPECC1-223ENST00000584527 MLECQ14165 292 aa24.55■■□□□ 1.52
SPECC1-223ENST00000584527 AFAP1Q8N556 730 aa24.55■■□□□ 1.52
SPECC1-223ENST00000584527 ITSN2Q9NZM3 1697 aa24.55■■□□□ 1.52
SPECC1-223ENST00000584527 ABCA6Q8N139 1617 aa24.53■■□□□ 1.52
SPECC1-223ENST00000584527 PREX1Q8TCU6 1659 aa24.53■■□□□ 1.52
SPECC1-223ENST00000584527 CDC42BPAQ5VT25 1732 aa24.52■■□□□ 1.52
SPECC1-223ENST00000584527 AGLP35573 1532 aa24.52■■□□□ 1.52
SPECC1-223ENST00000584527 TRAPPC8Q9Y2L5 1435 aa24.5■■□□□ 1.51
SPECC1-223ENST00000584527 HSPA2P54652 639 aa24.49■■□□□ 1.51
SPECC1-223ENST00000584527 KIDINS220Q9ULH0 1771 aa24.46■■□□□ 1.51
SPECC1-223ENST00000584527 PLPPR3Q6T4P5 718 aa24.45■■□□□ 1.5
SPECC1-223ENST00000584527 SAMD9LQ8IVG5 1584 aa24.43■■□□□ 1.5
SPECC1-223ENST00000584527 GPATCH8Q9UKJ3 1502 aaKnown RBP24.43■■□□□ 1.5
SPECC1-223ENST00000584527 MYT1LQ9UL68 1186 aa24.41■■□□□ 1.5
SPECC1-223ENST00000584527 UHRF1BP1Q6BDS2 1440 aa24.39■■□□□ 1.5
SPECC1-223ENST00000584527 SETD1BQ9UPS6 1966 aaKnown RBP24.39■■□□□ 1.49
SPECC1-223ENST00000584527 SYCP2Q9BX26 1530 aa24.39■■□□□ 1.49
SPECC1-223ENST00000584527 KIAA1107Q9UPP5 1409 aa24.38■■□□□ 1.49
SPECC1-223ENST00000584527 C3P01024 1663 aa24.38■■□□□ 1.49
SPECC1-223ENST00000584527 CEBPAP49715 358 aaPredicted RBP24.38■■□□□ 1.49
SPECC1-223ENST00000584527 PLEKHH2Q8IVE3 1493 aa24.38■■□□□ 1.49
SPECC1-223ENST00000584527 CNTLNQ9NXG0 1405 aa24.37■■□□□ 1.49
SPECC1-223ENST00000584527 INO80Q9ULG1 1556 aaPredicted RBP24.33■■□□□ 1.49
SPECC1-223ENST00000584527 ATP7AQ04656 1500 aa24.32■■□□□ 1.48
SPECC1-223ENST00000584527 MROH2AA6NES4 1674 aa24.32■■□□□ 1.48
SPECC1-223ENST00000584527 STRCQ7RTU9 1775 aa24.31■■□□□ 1.48
SPECC1-223ENST00000584527 PLXNC1O60486 1568 aa24.31■■□□□ 1.48
SPECC1-223ENST00000584527 MTUS2Q5JR59 1369 aa24.3■■□□□ 1.48
SPECC1-223ENST00000584527 CCNB3Q8WWL7 1395 aa24.3■■□□□ 1.48
SPECC1-223ENST00000584527 SPAG9O60271 1321 aaKnown RBP24.3■■□□□ 1.48
SPECC1-223ENST00000584527 EHBP1L1Q8N3D4 1523 aa24.3■■□□□ 1.48
SPECC1-223ENST00000584527 ESF1Q9H501 851 aaKnown RBP24.29■■□□□ 1.48
SPECC1-223ENST00000584527 ZNF777Q9ULD5 760 aaPredicted RBP24.29■■□□□ 1.48
SPECC1-223ENST00000584527 DMRT2Q9Y5R5 561 aa24.29■■□□□ 1.48
SPECC1-223ENST00000584527 CFDP1Q9UEE9 299 aaPredicted RBP24.28■■□□□ 1.48
SPECC1-223ENST00000584527 CERKQ8TCT0 537 aa24.27■■□□□ 1.48
SPECC1-223ENST00000584527 TIAM1Q13009 1591 aa24.27■■□□□ 1.48
SPECC1-223ENST00000584527 NPATQ14207 1427 aa24.27■■□□□ 1.48
SPECC1-223ENST00000584527 HNRNPMP52272 730 aaKnown RBP eCLIP24.25■■□□□ 1.47
SPECC1-223ENST00000584527 CEP162Q5TB80 1403 aa24.24■■□□□ 1.47
SPECC1-223ENST00000584527 LOC105371045A0A1W2PR82 267 aa24.23■■□□□ 1.47
SPECC1-223ENST00000584527 PTPRTO14522 1441 aa24.23■■□□□ 1.47
SPECC1-223ENST00000584527 A2MP01023 1474 aa24.23■■□□□ 1.47
SPECC1-223ENST00000584527 SUPT6HQ7KZ85 1726 aaKnown RBP24.22■■□□□ 1.47
SPECC1-223ENST00000584527 ADGBQ8N7X0 1667 aa24.21■■□□□ 1.47
SPECC1-223ENST00000584527 MBD5Q9P267 1494 aa24.19■■□□□ 1.46
SPECC1-223ENST00000584527 RTEL1-TNFRSF6BF6WH68 1400 aa24.18■■□□□ 1.46
SPECC1-223ENST00000584527 NCOA1Q15788 1441 aa24.18■■□□□ 1.46
SPECC1-223ENST00000584527 ZMYM3Q14202 1370 aa24.17■■□□□ 1.46
SPECC1-223ENST00000584527 CLTCQ00610 1675 aaKnown RBP24.15■■□□□ 1.46
SPECC1-223ENST00000584527 PPP6R1Q9UPN7 881 aa24.14■■□□□ 1.45
SPECC1-223ENST00000584527 ZNF142P52746 1687 aaPredicted RBP24.14■■□□□ 1.45
SPECC1-223ENST00000584527 ZNF644Q9H582 1327 aaPredicted RBP24.1■■□□□ 1.45
SPECC1-223ENST00000584527 MYO3AQ8NEV4 1616 aa24.1■■□□□ 1.45
SPECC1-223ENST00000584527 CAMSAP1Q5T5Y3 1602 aa24.1■■□□□ 1.45
SPECC1-223ENST00000584527 PTPRKQ15262 1439 aa24.1■■□□□ 1.45
SPECC1-223ENST00000584527 NCOA2Q15596 1464 aa24.09■■□□□ 1.45
SPECC1-223ENST00000584527 FAM135AQ9P2D6 1515 aa24.09■■□□□ 1.45
SPECC1-223ENST00000584527 PLA2R1Q13018 1463 aa24.08■■□□□ 1.45
SPECC1-223ENST00000584527 CCDC141Q6ZP82 1450 aa24.08■■□□□ 1.45
SPECC1-223ENST00000584527 LTBP4Q8N2S1 1624 aa24.08■■□□□ 1.45
SPECC1-223ENST00000584527 IQSEC2Q5JU85 1478 aa24.07■■□□□ 1.44
SPECC1-223ENST00000584527 CAMSAP2Q08AD1 1489 aa24.07■■□□□ 1.44
SPECC1-223ENST00000584527 DHX29Q7Z478 1369 aaKnown RBP24.06■■□□□ 1.44
SPECC1-223ENST00000584527 CEP170BQ9Y4F5 1589 aaPredicted RBP24.06■■□□□ 1.44
SPECC1-223ENST00000584527 RSPH4AQ5TD94 716 aa24.04■■□□□ 1.44
SPECC1-223ENST00000584527 GGT6Q6P531 493 aa24.04■■□□□ 1.44
SPECC1-223ENST00000584527 ARHGEF5Q12774 1597 aa24.03■■□□□ 1.44
SPECC1-223ENST00000584527 TCOF1Q13428 1488 aaKnown RBP24.01■■□□□ 1.43
SPECC1-223ENST00000584527 VPS8Q8N3P4 1428 aa24.01■■□□□ 1.43
SPECC1-223ENST00000584527 KDM5DQ9BY66 1539 aa23.99■■□□□ 1.43
SPECC1-223ENST00000584527 PKD2Q13563 968 aa23.98■■□□□ 1.43
SPECC1-223ENST00000584527 A2ML1A8K2U0 1454 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms