RNA–Protein interactions for RNA: ENST00000584424.1

TTC39C-210, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2

Gene TTC39C, Length 739 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-210ENST00000584424 BCL11BQ9C0K0 894 aaPredicted RBP12.16□□□□□ -0.46
TTC39C-210ENST00000584424 ZSWIM6Q9HCJ5 1215 aa12.16□□□□□ -0.46
TTC39C-210ENST00000584424 GPR153Q6NV75 609 aa12.15□□□□□ -0.46
TTC39C-210ENST00000584424 STK24Q9Y6E0 443 aa12.15□□□□□ -0.46
TTC39C-210ENST00000584424 NLRP6P59044 892 aa12.14□□□□□ -0.47
TTC39C-210ENST00000584424 ARSIQ5FYB1 569 aa12.13□□□□□ -0.47
TTC39C-210ENST00000584424 RNF166Q96A37 237 aaPredicted RBP12.12□□□□□ -0.47
TTC39C-210ENST00000584424 ZNF687Q8N1G0 1237 aa12.11□□□□□ -0.47
TTC39C-210ENST00000584424 TAOK2Q9UL54 1235 aa12.11□□□□□ -0.47
TTC39C-210ENST00000584424 KHSRPQ92945 711 aaKnown RBP eCLIP12.1□□□□□ -0.47
TTC39C-210ENST00000584424 FBXO22Q8NEZ5 403 aa12.08□□□□□ -0.48
TTC39C-210ENST00000584424 MYT1LQ9UL68 1186 aa12.08□□□□□ -0.48
TTC39C-210ENST00000584424 STK25O00506 426 aa12.07□□□□□ -0.48
TTC39C-210ENST00000584424 MFRPQ9BY79 579 aa12.05□□□□□ -0.48
TTC39C-210ENST00000584424 ANKRD13DQ6ZTN6 518 aa12.04□□□□□ -0.48
TTC39C-210ENST00000584424 ECM2O94769 699 aaPredicted RBP12.03□□□□□ -0.48
TTC39C-210ENST00000584424 ZNF316A6NFI3 1004 aaPredicted RBP12.01□□□□□ -0.49
TTC39C-210ENST00000584424 C2orf72A6NCS6 295 aa12□□□□□ -0.49
TTC39C-210ENST00000584424 NUDT7P0C024 238 aa11.97□□□□□ -0.49
TTC39C-210ENST00000584424 KIF3CO14782 793 aa11.95□□□□□ -0.5
TTC39C-210ENST00000584424 RGL2O15211 777 aa11.93□□□□□ -0.5
TTC39C-210ENST00000584424 PTGER2P43116 358 aa11.93□□□□□ -0.5
TTC39C-210ENST00000584424 LSM11P83369 360 aaKnown RBP eCLIP11.92□□□□□ -0.5
TTC39C-210ENST00000584424 TMC2Q8TDI7 906 aa11.92□□□□□ -0.5
TTC39C-210ENST00000584424 LHX6Q9UPM6 363 aa11.9□□□□□ -0.5
TTC39C-210ENST00000584424 AXIN2Q9Y2T1 843 aa11.89□□□□□ -0.51
TTC39C-210ENST00000584424 PCDHGA4Q9Y5G9 962 aa11.89□□□□□ -0.51
TTC39C-210ENST00000584424 PKD2Q13563 968 aa11.88□□□□□ -0.51
TTC39C-210ENST00000584424 PPP1R37O75864 691 aa11.85□□□□□ -0.51
TTC39C-210ENST00000584424 SLC34A2O95436 690 aa11.83□□□□□ -0.52
TTC39C-210ENST00000584424 PBX2P40425 430 aa11.83□□□□□ -0.52
TTC39C-210ENST00000584424 POTEEQ6S8J3 1075 aa11.82□□□□□ -0.52
TTC39C-210ENST00000584424 ARHGAP33O14559 1287 aa11.73□□□□□ -0.53
TTC39C-210ENST00000584424 ADGRD1Q6QNK2 874 aa11.72□□□□□ -0.53
TTC39C-210ENST00000584424 PSDA5PKW4 1024 aaPredicted RBP11.71□□□□□ -0.53
TTC39C-210ENST00000584424 PLPP6Q8IY26 295 aa11.71□□□□□ -0.53
TTC39C-210ENST00000584424 PSEN2P49810 448 aa11.69□□□□□ -0.54
TTC39C-210ENST00000584424 PTCD2Q8WV60 388 aaKnown RBP11.69□□□□□ -0.54
TTC39C-210ENST00000584424 FOXK1P85037 733 aa11.68□□□□□ -0.54
TTC39C-210ENST00000584424 PLA2G2EQ9NZK7 142 aa11.68□□□□□ -0.54
TTC39C-210ENST00000584424 HCSTQ9UBK5 93 aa11.68□□□□□ -0.54
TTC39C-210ENST00000584424 DMRTA1Q5VZB9 504 aa11.67□□□□□ -0.54
TTC39C-210ENST00000584424 DSG2Q14126 1118 aa11.66□□□□□ -0.54
TTC39C-210ENST00000584424 KDM4FA0A1W2PPD8 638 aa11.65□□□□□ -0.54
TTC39C-210ENST00000584424 GPHNQ9NQX3 736 aaPredicted RBP11.65□□□□□ -0.54
TTC39C-210ENST00000584424 TBC1D12O60347 775 aa11.64□□□□□ -0.55
TTC39C-210ENST00000584424 PPP4R3BQ5MIZ7 849 aa11.64□□□□□ -0.55
TTC39C-210ENST00000584424 CHGAP10645 457 aaKnown RBP11.63□□□□□ -0.55
TTC39C-210ENST00000584424 HS6ST3Q8IZP7 471 aa11.63□□□□□ -0.55
TTC39C-210ENST00000584424 STAC3Q96MF2 364 aa11.62□□□□□ -0.55
TTC39C-210ENST00000584424 TK2O00142 265 aa11.6□□□□□ -0.55
TTC39C-210ENST00000584424 UPF1Q92900 1129 aaKnown RBP eCLIP11.59□□□□□ -0.55
TTC39C-210ENST00000584424 KCTD12Q96CX2 325 aaKnown RBP11.59□□□□□ -0.55
TTC39C-210ENST00000584424 KCNK17Q96T54 332 aa11.59□□□□□ -0.55
TTC39C-210ENST00000584424 HRO43593 1189 aa11.58□□□□□ -0.56
TTC39C-210ENST00000584424 KCNH8Q96L42 1107 aa11.57□□□□□ -0.56
TTC39C-210ENST00000584424 ZNF454Q8N9F8 522 aa11.52□□□□□ -0.57
TTC39C-210ENST00000584424 NKX1-1Q15270 411 aaPredicted RBP11.51□□□□□ -0.57
TTC39C-210ENST00000584424 PTPN5P54829 565 aa11.5□□□□□ -0.57
TTC39C-210ENST00000584424 OXER1Q8TDS5 423 aa11.5□□□□□ -0.57
TTC39C-210ENST00000584424 VPS9D1Q9Y2B5 631 aa11.48□□□□□ -0.57
TTC39C-210ENST00000584424 PPP1R15BQ5SWA1 713 aa11.47□□□□□ -0.57
TTC39C-210ENST00000584424 CRISPLD2Q9H0B8 497 aa11.45□□□□□ -0.58
TTC39C-210ENST00000584424 RYDENQ9NUL5 291 aaKnown RBP11.45□□□□□ -0.58
TTC39C-210ENST00000584424 BCL2L12Q9HB09 334 aa11.43□□□□□ -0.58
TTC39C-210ENST00000584424 GOLGA8CPA6NN73 597 aa11.41□□□□□ -0.58
TTC39C-210ENST00000584424 PTPREP23469 700 aa11.41□□□□□ -0.58
TTC39C-210ENST00000584424 PDE4AP27815 886 aa11.4□□□□□ -0.58
TTC39C-210ENST00000584424 FOSBP53539 338 aa11.4□□□□□ -0.58
TTC39C-210ENST00000584424 NCKAP5LQ9HCH0 1330 aa11.39□□□□□ -0.59
TTC39C-210ENST00000584424 DNAJC5Q9H3Z4 198 aa11.39□□□□□ -0.59
TTC39C-210ENST00000584424 EVI5O60447 810 aa11.38□□□□□ -0.59
TTC39C-210ENST00000584424 LARP6Q9BRS8 491 aaKnown RBP11.37□□□□□ -0.59
TTC39C-210ENST00000584424 MRPL50Q8N5N7 158 aaKnown RBP11.36□□□□□ -0.59
TTC39C-210ENST00000584424 WNT2BQ93097 391 aa11.36□□□□□ -0.59
TTC39C-210ENST00000584424 ZBED2Q9BTP6 218 aa11.36□□□□□ -0.59
TTC39C-210ENST00000584424 SLC4A5Q9BY07 1137 aa11.36□□□□□ -0.59
TTC39C-210ENST00000584424 BHMG1C9JSJ3 638 aaPredicted RBP11.35□□□□□ -0.59
TTC39C-210ENST00000584424 THSD4Q6ZMP0 1018 aa11.35□□□□□ -0.59
TTC39C-210ENST00000584424 MAP3K9P80192 1104 aa11.34□□□□□ -0.59
TTC39C-210ENST00000584424 ZDHHC16Q969W1 377 aa11.34□□□□□ -0.59
TTC39C-210ENST00000584424 JPH4Q96JJ6 628 aa11.34□□□□□ -0.59
TTC39C-210ENST00000584424 ADAM33Q9BZ11 813 aa11.34□□□□□ -0.59
TTC39C-210ENST00000584424 ANO8Q9HCE9 1232 aaPredicted RBP11.34□□□□□ -0.59
TTC39C-210ENST00000584424 DDX27Q96GQ7 796 aaKnown RBP11.33□□□□□ -0.6
TTC39C-210ENST00000584424 GTPBP6O43824 516 aaPredicted RBP11.3□□□□□ -0.6
TTC39C-210ENST00000584424 DCAF8L2P0C7V8 631 aa11.29□□□□□ -0.6
TTC39C-210ENST00000584424 NBPF3Q9H094 633 aa11.29□□□□□ -0.6
TTC39C-210ENST00000584424 PROX2Q3B8N5 592 aa11.24□□□□□ -0.61
TTC39C-210ENST00000584424 EMILIN3Q9NT22 766 aa11.24□□□□□ -0.61
TTC39C-210ENST00000584424 PCDHGA10Q9Y5H3 936 aa11.23□□□□□ -0.61
TTC39C-210ENST00000584424 PPP1R3GB7ZBB8 358 aa11.22□□□□□ -0.61
TTC39C-210ENST00000584424 MFSD10Q14728 455 aa11.22□□□□□ -0.61
TTC39C-210ENST00000584424 IFFO2Q5TF58 517 aa11.22□□□□□ -0.61
TTC39C-210ENST00000584424 A0A0G2JS52 829 aa11.21□□□□□ -0.61
TTC39C-210ENST00000584424 COL9A1P20849 921 aa11.21□□□□□ -0.61
TTC39C-210ENST00000584424 ANKK1Q8NFD2 765 aa11.2□□□□□ -0.62
TTC39C-210ENST00000584424 IRX2Q9BZI1 471 aaPredicted RBP11.2□□□□□ -0.62
TTC39C-210ENST00000584424 RABGEF1Q9UJ41 708 aa11.19□□□□□ -0.62
TTC39C-210ENST00000584424 RGS20O76081 388 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms