RNA–Protein interactions for RNA: ENST00000584310.1

SCN4A-203, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

TSL 4

Gene SCN4A, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-203ENST00000584310 MAGI2Q86UL8 1455 aa23.53■■□□□ 1.36
SCN4A-203ENST00000584310 LRRIQ1Q96JM4 1722 aa23.52■■□□□ 1.36
SCN4A-203ENST00000584310 POGZQ7Z3K3 1410 aa23.5■■□□□ 1.35
SCN4A-203ENST00000584310 CCNB3Q8WWL7 1395 aa23.5■■□□□ 1.35
SCN4A-203ENST00000584310 ZNF518AQ6AHZ1 1483 aa23.49■■□□□ 1.35
SCN4A-203ENST00000584310 APLP2Q06481 763 aa23.48■■□□□ 1.35
SCN4A-203ENST00000584310 ZNF777Q9ULD5 760 aaPredicted RBP23.48■■□□□ 1.35
SCN4A-203ENST00000584310 CFDP1Q9UEE9 299 aaPredicted RBP23.47■■□□□ 1.35
SCN4A-203ENST00000584310 FRMPD1Q5SYB0 1578 aa23.47■■□□□ 1.35
SCN4A-203ENST00000584310 ZMYM4Q5VZL5 1548 aa23.46■■□□□ 1.35
SCN4A-203ENST00000584310 ZFYVE16Q7Z3T8 1539 aa23.46■■□□□ 1.35
SCN4A-203ENST00000584310 VPS8Q8N3P4 1428 aa23.46■■□□□ 1.35
SCN4A-203ENST00000584310 RICTORQ6R327 1708 aa23.45■■□□□ 1.34
SCN4A-203ENST00000584310 ARHGEF40Q8TER5 1519 aa23.45■■□□□ 1.34
SCN4A-203ENST00000584310 EHBP1L1Q8N3D4 1523 aa23.43■■□□□ 1.34
SCN4A-203ENST00000584310 PREX2Q70Z35 1606 aa23.43■■□□□ 1.34
SCN4A-203ENST00000584310 AFAP1Q8N556 730 aa23.4■■□□□ 1.34
SCN4A-203ENST00000584310 PLEKHH2Q8IVE3 1493 aa23.4■■□□□ 1.34
SCN4A-203ENST00000584310 GPATCH8Q9UKJ3 1502 aaKnown RBP23.38■■□□□ 1.33
SCN4A-203ENST00000584310 ATP10AO60312 1499 aa23.36■■□□□ 1.33
SCN4A-203ENST00000584310 CDC42BPBQ9Y5S2 1711 aa23.36■■□□□ 1.33
SCN4A-203ENST00000584310 C9orf84Q5VXU9 1444 aa23.35■■□□□ 1.33
SCN4A-203ENST00000584310 YEATS2Q9ULM3 1422 aa23.35■■□□□ 1.33
SCN4A-203ENST00000584310 ABCC1P33527 1531 aa23.34■■□□□ 1.33
SCN4A-203ENST00000584310 CDC42BPAQ5VT25 1732 aa23.33■■□□□ 1.32
SCN4A-203ENST00000584310 MLECQ14165 292 aa23.31■■□□□ 1.32
SCN4A-203ENST00000584310 KIAA1107Q9UPP5 1409 aa23.31■■□□□ 1.32
SCN4A-203ENST00000584310 KDM5CP41229 1560 aa23.31■■□□□ 1.32
SCN4A-203ENST00000584310 TIAM1Q13009 1591 aa23.31■■□□□ 1.32
SCN4A-203ENST00000584310 HECW2Q9P2P5 1572 aa23.31■■□□□ 1.32
SCN4A-203ENST00000584310 SPAG9O60271 1321 aaKnown RBP23.31■■□□□ 1.32
SCN4A-203ENST00000584310 MLH3Q9UHC1 1453 aa23.3■■□□□ 1.32
SCN4A-203ENST00000584310 ESF1Q9H501 851 aaKnown RBP23.3■■□□□ 1.32
SCN4A-203ENST00000584310 ITSN2Q9NZM3 1697 aa23.29■■□□□ 1.32
SCN4A-203ENST00000584310 HNRNPMP52272 730 aaKnown RBP eCLIP23.29■■□□□ 1.32
SCN4A-203ENST00000584310 SUPT6HQ7KZ85 1726 aaKnown RBP23.29■■□□□ 1.32
SCN4A-203ENST00000584310 TRAPPC8Q9Y2L5 1435 aa23.29■■□□□ 1.32
SCN4A-203ENST00000584310 BCORL1Q5H9F3 1711 aa23.27■■□□□ 1.32
SCN4A-203ENST00000584310 MAP3K1Q13233 1512 aa23.27■■□□□ 1.32
SCN4A-203ENST00000584310 NCOA2Q15596 1464 aa23.26■■□□□ 1.31
SCN4A-203ENST00000584310 RSPH4AQ5TD94 716 aa23.26■■□□□ 1.31
SCN4A-203ENST00000584310 LRRC9Q6ZRR7 1453 aa23.25■■□□□ 1.31
SCN4A-203ENST00000584310 SYCP2Q9BX26 1530 aa23.25■■□□□ 1.31
SCN4A-203ENST00000584310 PTPRMP28827 1452 aa23.24■■□□□ 1.31
SCN4A-203ENST00000584310 SAMD9LQ8IVG5 1584 aa23.24■■□□□ 1.31
SCN4A-203ENST00000584310 ADAMTSL3P82987 1691 aa23.24■■□□□ 1.31
SCN4A-203ENST00000584310 ARHGEF12Q9NZN5 1544 aa23.23■■□□□ 1.31
SCN4A-203ENST00000584310 PLPPR3Q6T4P5 718 aa23.19■■□□□ 1.3
SCN4A-203ENST00000584310 MADDQ8WXG6 1647 aa23.19■■□□□ 1.3
SCN4A-203ENST00000584310 TSPY4P0CV99 314 aa23.18■■□□□ 1.3
SCN4A-203ENST00000584310 TSPY10P0CW01 314 aa23.18■■□□□ 1.3
SCN4A-203ENST00000584310 DIP2CQ9Y2E4 1556 aa23.18■■□□□ 1.3
SCN4A-203ENST00000584310 REREQ9P2R6 1566 aa23.17■■□□□ 1.3
SCN4A-203ENST00000584310 ZNF644Q9H582 1327 aaPredicted RBP23.16■■□□□ 1.3
SCN4A-203ENST00000584310 KANK4Q5T7N3 995 aaPredicted RBP23.14■■□□□ 1.29
SCN4A-203ENST00000584310 ATP7AQ04656 1500 aa23.13■■□□□ 1.29
SCN4A-203ENST00000584310 ABCA6Q8N139 1617 aa23.13■■□□□ 1.29
SCN4A-203ENST00000584310 RIMS1Q86UR5 1692 aaKnown RBP23.13■■□□□ 1.29
SCN4A-203ENST00000584310 AGLP35573 1532 aa23.12■■□□□ 1.29
SCN4A-203ENST00000584310 CAMSAP2Q08AD1 1489 aa23.11■■□□□ 1.29
SCN4A-203ENST00000584310 CCDC141Q6ZP82 1450 aa23.11■■□□□ 1.29
SCN4A-203ENST00000584310 RTEL1-TNFRSF6BF6WH68 1400 aa23.1■■□□□ 1.29
SCN4A-203ENST00000584310 KIDINS220Q9ULH0 1771 aa23.09■■□□□ 1.29
SCN4A-203ENST00000584310 MIA2Q96PC5 1412 aa23.09■■□□□ 1.29
SCN4A-203ENST00000584310 FER1L4A9Z1Z3 1794 aa23.09■■□□□ 1.29
SCN4A-203ENST00000584310 MYOM3Q5VTT5 1437 aa23.08■■□□□ 1.29
SCN4A-203ENST00000584310 A2MP01023 1474 aa23.08■■□□□ 1.29
SCN4A-203ENST00000584310 MBD5Q9P267 1494 aa23.08■■□□□ 1.29
SCN4A-203ENST00000584310 CNTLNQ9NXG0 1405 aa23.08■■□□□ 1.28
SCN4A-203ENST00000584310 INO80Q9ULG1 1556 aaPredicted RBP23.05■■□□□ 1.28
SCN4A-203ENST00000584310 SIGLEC1Q9BZZ2 1709 aa23.03■■□□□ 1.28
SCN4A-203ENST00000584310 PPP6R1Q9UPN7 881 aa23.03■■□□□ 1.28
SCN4A-203ENST00000584310 GGT6Q6P531 493 aa23.02■■□□□ 1.28
SCN4A-203ENST00000584310 ARHGEF5Q12774 1597 aa23■■□□□ 1.27
SCN4A-203ENST00000584310 DHX29Q7Z478 1369 aaKnown RBP23■■□□□ 1.27
SCN4A-203ENST00000584310 ADGBQ8N7X0 1667 aa23■■□□□ 1.27
SCN4A-203ENST00000584310 CEBPAP49715 358 aaPredicted RBP22.97■■□□□ 1.27
SCN4A-203ENST00000584310 KIF3BO15066 747 aa22.95■■□□□ 1.26
SCN4A-203ENST00000584310 PLXNC1O60486 1568 aa22.94■■□□□ 1.26
SCN4A-203ENST00000584310 UHRF1BP1Q6BDS2 1440 aa22.93■■□□□ 1.26
SCN4A-203ENST00000584310 LMTK3Q96Q04 1460 aa22.92■■□□□ 1.26
SCN4A-203ENST00000584310 FGD6Q6ZV73 1430 aa22.91■■□□□ 1.26
SCN4A-203ENST00000584310 ZMYM3Q14202 1370 aa22.89■■□□□ 1.26
SCN4A-203ENST00000584310 WASHC2CQ9Y4E1 1318 aa22.88■■□□□ 1.25
SCN4A-203ENST00000584310 FAM50AQ14320 339 aaKnown RBP22.88■■□□□ 1.25
SCN4A-203ENST00000584310 PTPN23Q9H3S7 1636 aa22.88■■□□□ 1.25
SCN4A-203ENST00000584310 MAST1Q9Y2H9 1570 aa22.86■■□□□ 1.25
SCN4A-203ENST00000584310 NPATQ14207 1427 aa22.86■■□□□ 1.25
SCN4A-203ENST00000584310 HSPA2P54652 639 aa22.86■■□□□ 1.25
SCN4A-203ENST00000584310 PREX1Q8TCU6 1659 aa22.84■■□□□ 1.25
SCN4A-203ENST00000584310 DMRT2Q9Y5R5 561 aa22.84■■□□□ 1.25
SCN4A-203ENST00000584310 SHANK2Q9UPX8 1470 aa22.84■■□□□ 1.25
SCN4A-203ENST00000584310 MROH2AA6NES4 1674 aa22.84■■□□□ 1.25
SCN4A-203ENST00000584310 FAM135AQ9P2D6 1515 aa22.83■■□□□ 1.25
SCN4A-203ENST00000584310 SETD1BQ9UPS6 1966 aaKnown RBP22.82■■□□□ 1.24
SCN4A-203ENST00000584310 C3P01024 1663 aa22.82■■□□□ 1.24
SCN4A-203ENST00000584310 TCOF1Q13428 1488 aaKnown RBP22.82■■□□□ 1.24
SCN4A-203ENST00000584310 ANKRD30AQ9BXX3 1397 aa22.82■■□□□ 1.24
SCN4A-203ENST00000584310 DAPK1P53355 1430 aa22.82■■□□□ 1.24
SCN4A-203ENST00000584310 KIF15Q9NS87 1388 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms