RNA–Protein interactions for RNA: ENST00000583683.1

NDEL1-217, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 1,802 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-217ENST00000583683 PLCH2O75038 1416 aa27.59■■■□□ 2.01
NDEL1-217ENST00000583683 ARHGAP5Q13017 1502 aa27.56■■■□□ 2
NDEL1-217ENST00000583683 ZNF644Q9H582 1327 aaPredicted RBP27.56■■■□□ 2
NDEL1-217ENST00000583683 ARAP3Q8WWN8 1544 aa27.55■■■□□ 2
NDEL1-217ENST00000583683 CAMSAP2Q08AD1 1489 aa27.54■■■□□ 2
NDEL1-217ENST00000583683 DIP2BQ9P265 1576 aa27.54■■■□□ 2
NDEL1-217ENST00000583683 GLI2P10070 1586 aa27.54■■■□□ 2
NDEL1-217ENST00000583683 ZNF777Q9ULD5 760 aaPredicted RBP27.52■■■□□ 2
NDEL1-217ENST00000583683 SAMD9LQ8IVG5 1584 aa27.51■■■□□ 2
NDEL1-217ENST00000583683 CD109Q6YHK3 1445 aa27.49■■□□□ 1.99
NDEL1-217ENST00000583683 MAP3K4Q9Y6R4 1608 aa27.49■■□□□ 1.99
NDEL1-217ENST00000583683 ITGAEP38570 1179 aa27.48■■□□□ 1.99
NDEL1-217ENST00000583683 EFCAB2Q5VUJ9 269 aa27.46■■□□□ 1.99
NDEL1-217ENST00000583683 KIF13AQ9H1H9 1805 aa27.45■■□□□ 1.99
NDEL1-217ENST00000583683 DNMT1P26358 1616 aaKnown RBP27.45■■□□□ 1.99
NDEL1-217ENST00000583683 FAM69CQ0P6D2 419 aa27.44■■□□□ 1.98
NDEL1-217ENST00000583683 FANCAO15360 1455 aa27.44■■□□□ 1.98
NDEL1-217ENST00000583683 PTPRKQ15262 1439 aa27.42■■□□□ 1.98
NDEL1-217ENST00000583683 DAPK1P53355 1430 aa27.4■■□□□ 1.98
NDEL1-217ENST00000583683 PLEKHH2Q8IVE3 1493 aa27.39■■□□□ 1.98
NDEL1-217ENST00000583683 MBD5Q9P267 1494 aa27.39■■□□□ 1.98
NDEL1-217ENST00000583683 ABCC5O15440 1437 aa27.39■■□□□ 1.98
NDEL1-217ENST00000583683 ABCC1P33527 1531 aa27.39■■□□□ 1.97
NDEL1-217ENST00000583683 SYCP2Q9BX26 1530 aa27.39■■□□□ 1.97
NDEL1-217ENST00000583683 KIAA1107Q9UPP5 1409 aa27.39■■□□□ 1.97
NDEL1-217ENST00000583683 ARHGEF5Q12774 1597 aa27.38■■□□□ 1.97
NDEL1-217ENST00000583683 CROCC2H7BZ55 1655 aa27.37■■□□□ 1.97
NDEL1-217ENST00000583683 CFAP74Q9C0B2 1584 aa27.37■■□□□ 1.97
NDEL1-217ENST00000583683 HNRNPMP52272 730 aaKnown RBP eCLIP27.37■■□□□ 1.973e-7■■■■□ 24.3
NDEL1-217ENST00000583683 ARHGEF12Q9NZN5 1544 aa27.36■■□□□ 1.97
NDEL1-217ENST00000583683 TSPOAP1O95153 1857 aa27.33■■□□□ 1.97
NDEL1-217ENST00000583683 PPRC1Q5VV67 1664 aaKnown RBP27.33■■□□□ 1.97
NDEL1-217ENST00000583683 AKNAQ7Z591 1439 aa27.32■■□□□ 1.96
NDEL1-217ENST00000583683 CCDC141Q6ZP82 1450 aa27.31■■□□□ 1.96
NDEL1-217ENST00000583683 ADGRL1O94910 1474 aa27.3■■□□□ 1.96
NDEL1-217ENST00000583683 NEO1Q92859 1461 aa27.3■■□□□ 1.96
NDEL1-217ENST00000583683 RSPH4AQ5TD94 716 aa27.3■■□□□ 1.96
NDEL1-217ENST00000583683 CHIC2Q9UKJ5 165 aa27.28■■□□□ 1.96
NDEL1-217ENST00000583683 SHANK2Q9UPX8 1470 aa27.28■■□□□ 1.96
NDEL1-217ENST00000583683 ADGBQ8N7X0 1667 aa27.26■■□□□ 1.95
NDEL1-217ENST00000583683 SCAPERQ9BY12 1400 aa27.25■■□□□ 1.95
NDEL1-217ENST00000583683 TRAPPC8Q9Y2L5 1435 aa27.25■■□□□ 1.95
NDEL1-217ENST00000583683 C9orf84Q5VXU9 1444 aa27.24■■□□□ 1.95
NDEL1-217ENST00000583683 ROCK1Q13464 1354 aa27.23■■□□□ 1.95
NDEL1-217ENST00000583683 TEX14Q8IWB6 1497 aa27.23■■□□□ 1.95
NDEL1-217ENST00000583683 TSPY4P0CV99 314 aa27.23■■□□□ 1.95
NDEL1-217ENST00000583683 TSPY10P0CW01 314 aa27.23■■□□□ 1.95
NDEL1-217ENST00000583683 HFM1A2PYH4 1435 aa27.22■■□□□ 1.95
NDEL1-217ENST00000583683 ADGRL2O95490 1459 aa27.22■■□□□ 1.95
NDEL1-217ENST00000583683 MAST1Q9Y2H9 1570 aa27.21■■□□□ 1.95
NDEL1-217ENST00000583683 NAIPQ13075 1403 aa27.19■■□□□ 1.94
NDEL1-217ENST00000583683 NCOA1Q15788 1441 aa27.19■■□□□ 1.94
NDEL1-217ENST00000583683 SETD5Q9C0A6 1442 aa27.19■■□□□ 1.94
NDEL1-217ENST00000583683 GCC2Q8IWJ2 1684 aa27.19■■□□□ 1.94
NDEL1-217ENST00000583683 AFAP1Q8N556 730 aa27.18■■□□□ 1.94
NDEL1-217ENST00000583683 RRP7BPQ9NSQ0 103 aa27.18■■□□□ 1.94
NDEL1-217ENST00000583683 ZNF518AQ6AHZ1 1483 aa27.16■■□□□ 1.94
NDEL1-217ENST00000583683 POGZQ7Z3K3 1410 aa27.15■■□□□ 1.94
NDEL1-217ENST00000583683 ANKRD30AQ9BXX3 1397 aa27.15■■□□□ 1.94
NDEL1-217ENST00000583683 RAB3GAP2Q9H2M9 1393 aa27.14■■□□□ 1.94
NDEL1-217ENST00000583683 TRHP20396 242 aaPredicted RBP27.14■■□□□ 1.94
NDEL1-217ENST00000583683 DENND4BO75064 1496 aaPredicted RBP27.13■■□□□ 1.93
NDEL1-217ENST00000583683 RICTORQ6R327 1708 aa27.12■■□□□ 1.93
NDEL1-217ENST00000583683 KDM5CP41229 1560 aa27.12■■□□□ 1.93
NDEL1-217ENST00000583683 ZFYVE16Q7Z3T8 1539 aa27.11■■□□□ 1.93
NDEL1-217ENST00000583683 PLXNC1O60486 1568 aa27.11■■□□□ 1.93
NDEL1-217ENST00000583683 INO80Q9ULG1 1556 aaPredicted RBP27.11■■□□□ 1.93
NDEL1-217ENST00000583683 SPAG9O60271 1321 aaKnown RBP27.1■■□□□ 1.93
NDEL1-217ENST00000583683 RTEL1-TNFRSF6BF6WH68 1400 aa27.1■■□□□ 1.93
NDEL1-217ENST00000583683 KDM6BO15054 1643 aa27.07■■□□□ 1.92
NDEL1-217ENST00000583683 ATP7AQ04656 1500 aa27.07■■□□□ 1.92
NDEL1-217ENST00000583683 RAPGEF3O95398 923 aa27.07■■□□□ 1.92
NDEL1-217ENST00000583683 KIF15Q9NS87 1388 aa27.07■■□□□ 1.92
NDEL1-217ENST00000583683 FRMPD1Q5SYB0 1578 aa27.06■■□□□ 1.92
NDEL1-217ENST00000583683 KIDINS220Q9ULH0 1771 aa27.06■■□□□ 1.92
NDEL1-217ENST00000583683 HRCP23327 699 aa27.05■■□□□ 1.92
NDEL1-217ENST00000583683 HECW2Q9P2P5 1572 aa27.03■■□□□ 1.92
NDEL1-217ENST00000583683 MLH3Q9UHC1 1453 aa27.02■■□□□ 1.92
NDEL1-217ENST00000583683 COL17A1Q9UMD9 1497 aaPredicted RBP27.01■■□□□ 1.91
NDEL1-217ENST00000583683 ANKRD50Q9ULJ7 1429 aa27■■□□□ 1.91
NDEL1-217ENST00000583683 DUOX2Q9NRD8 1548 aa26.99■■□□□ 1.91
NDEL1-217ENST00000583683 ZMYM4Q5VZL5 1548 aa26.98■■□□□ 1.91
NDEL1-217ENST00000583683 MYT1LQ9UL68 1186 aa26.97■■□□□ 1.91
NDEL1-217ENST00000583683 ABCA6Q8N139 1617 aa26.94■■□□□ 1.9
NDEL1-217ENST00000583683 ERBINQ96RT1 1412 aa26.92■■□□□ 1.9
NDEL1-217ENST00000583683 DHX57Q6P158 1386 aaKnown RBP26.9■■□□□ 1.9
NDEL1-217ENST00000583683 MAGI2Q86UL8 1455 aa26.89■■□□□ 1.9
NDEL1-217ENST00000583683 DIP2CQ9Y2E4 1556 aa26.89■■□□□ 1.89
NDEL1-217ENST00000583683 YEATS2Q9ULM3 1422 aa26.88■■□□□ 1.89
NDEL1-217ENST00000583683 CCER1Q8TC90 406 aaPredicted RBP26.88■■□□□ 1.89
NDEL1-217ENST00000583683 ACIN1Q9UKV3 1341 aaKnown RBP26.87■■□□□ 1.89
NDEL1-217ENST00000583683 DHX29Q7Z478 1369 aaKnown RBP26.87■■□□□ 1.89
NDEL1-217ENST00000583683 A2MP01023 1474 aa26.86■■□□□ 1.89
NDEL1-217ENST00000583683 TRIM52Q96A61 297 aa26.83■■□□□ 1.89
NDEL1-217ENST00000583683 EIF2AK4Q9P2K8 1649 aaKnown RBP26.83■■□□□ 1.89
NDEL1-217ENST00000583683 UNC13BO14795 1591 aa26.82■■□□□ 1.88
NDEL1-217ENST00000583683 KDM5DQ9BY66 1539 aa26.78■■□□□ 1.88
NDEL1-217ENST00000583683 DEPDC5O75140 1603 aa26.78■■□□□ 1.88
NDEL1-217ENST00000583683 ARHGEF40Q8TER5 1519 aa26.78■■□□□ 1.88
NDEL1-217ENST00000583683 BCORL1Q5H9F3 1711 aa26.76■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms