RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 PCF11O94913 1555 aaKnown RBP40.21■■■■■ 4.03
TSEN54-209ENST00000583454 MAGI2Q86UL8 1455 aa40.19■■■■■ 4.02
TSEN54-209ENST00000583454 SCAPERQ9BY12 1400 aa40.18■■■■■ 4.02
TSEN54-209ENST00000583454 CDK11AQ9UQ88 783 aaPredicted RBP40.16■■■■■ 4.02
TSEN54-209ENST00000583454 ARID4BQ4LE39 1312 aaPredicted RBP40.15■■■■■ 4.02
TSEN54-209ENST00000583454 LOC105371045A0A1W2PR82 267 aa40.14■■■■■ 4.02
TSEN54-209ENST00000583454 CASKIN1Q8WXD9 1431 aa40.14■■■■■ 4.02
TSEN54-209ENST00000583454 RIMS1Q86UR5 1692 aaKnown RBP40.13■■■■■ 4.01
TSEN54-209ENST00000583454 CLIP1P30622 1438 aa40.12■■■■■ 4.01
TSEN54-209ENST00000583454 CDC42BPBQ9Y5S2 1711 aa40.09■■■■■ 4.01
TSEN54-209ENST00000583454 EFCAB2Q5VUJ9 269 aa40.07■■■■■ 4.01
TSEN54-209ENST00000583454 CCDC18Q5T9S5 1454 aa40.07■■■■■ 4
TSEN54-209ENST00000583454 ARHGAP5Q13017 1502 aa40.04■■■■■ 4
TSEN54-209ENST00000583454 PREX2Q70Z35 1606 aa40.01■■■■■ 4
TSEN54-209ENST00000583454 KDM5CP41229 1560 aa40.01■■■■□ 3.99
TSEN54-209ENST00000583454 FYCO1Q9BQS8 1478 aa39.99■■■■□ 3.99
TSEN54-209ENST00000583454 CEP162Q5TB80 1403 aa39.97■■■■□ 3.99
TSEN54-209ENST00000583454 ZNF518AQ6AHZ1 1483 aa39.96■■■■□ 3.99
TSEN54-209ENST00000583454 ATP10AO60312 1499 aa39.95■■■■□ 3.99
TSEN54-209ENST00000583454 FER1L4A9Z1Z3 1794 aa39.95■■■■□ 3.99
TSEN54-209ENST00000583454 ILDR1Q86SU0 546 aaPredicted RBP39.95■■■■□ 3.99
TSEN54-209ENST00000583454 LMTK3Q96Q04 1460 aa39.94■■■■□ 3.98
TSEN54-209ENST00000583454 CDC42BPAQ5VT25 1732 aa39.93■■■■□ 3.98
TSEN54-209ENST00000583454 C9orf84Q5VXU9 1444 aa39.91■■■■□ 3.98
TSEN54-209ENST00000583454 ABCC1P33527 1531 aa39.89■■■■□ 3.98
TSEN54-209ENST00000583454 ARHGEF12Q9NZN5 1544 aa39.88■■■■□ 3.97
TSEN54-209ENST00000583454 ITSN2Q9NZM3 1697 aa39.86■■■■□ 3.97
TSEN54-209ENST00000583454 AFAP1Q8N556 730 aa39.86■■■■□ 3.97
TSEN54-209ENST00000583454 DIP2CQ9Y2E4 1556 aa39.85■■■■□ 3.97
TSEN54-209ENST00000583454 ABCA6Q8N139 1617 aa39.81■■■■□ 3.96
TSEN54-209ENST00000583454 MLECQ14165 292 aa39.8■■■■□ 3.96
TSEN54-209ENST00000583454 REREQ9P2R6 1566 aa39.8■■■■□ 3.96
TSEN54-209ENST00000583454 MLH3Q9UHC1 1453 aa39.78■■■■□ 3.96
TSEN54-209ENST00000583454 TRAPPC8Q9Y2L5 1435 aa39.78■■■■□ 3.96
TSEN54-209ENST00000583454 KIDINS220Q9ULH0 1771 aa39.72■■■■□ 3.95
TSEN54-209ENST00000583454 SAMD9LQ8IVG5 1584 aa39.71■■■■□ 3.95
TSEN54-209ENST00000583454 GPATCH8Q9UKJ3 1502 aaKnown RBP39.69■■■■□ 3.94
TSEN54-209ENST00000583454 PLPPR3Q6T4P5 718 aa39.67■■■■□ 3.94
TSEN54-209ENST00000583454 AGLP35573 1532 aa39.63■■■■□ 3.93
TSEN54-209ENST00000583454 SYCP2Q9BX26 1530 aa39.6■■■■□ 3.93
TSEN54-209ENST00000583454 HSPA2P54652 639 aa39.6■■■■□ 3.93
TSEN54-209ENST00000583454 PREX1Q8TCU6 1659 aa39.6■■■■□ 3.93
TSEN54-209ENST00000583454 MYT1LQ9UL68 1186 aa39.56■■■■□ 3.92
TSEN54-209ENST00000583454 CEBPAP49715 358 aaPredicted RBP39.52■■■■□ 3.92
TSEN54-209ENST00000583454 C3P01024 1663 aa39.51■■■■□ 3.92
TSEN54-209ENST00000583454 ZNF777Q9ULD5 760 aaPredicted RBP39.5■■■■□ 3.91
TSEN54-209ENST00000583454 VPS8Q8N3P4 1428 aa39.48■■■■□ 3.91
TSEN54-209ENST00000583454 MTUS2Q5JR59 1369 aa39.48■■■■□ 3.91
TSEN54-209ENST00000583454 TIAM1Q13009 1591 aa39.48■■■■□ 3.91
TSEN54-209ENST00000583454 KIAA1107Q9UPP5 1409 aa39.48■■■■□ 3.91
TSEN54-209ENST00000583454 EHBP1L1Q8N3D4 1523 aa39.47■■■■□ 3.91
TSEN54-209ENST00000583454 INO80Q9ULG1 1556 aaPredicted RBP39.46■■■■□ 3.91
TSEN54-209ENST00000583454 SETD1BQ9UPS6 1966 aaKnown RBP39.46■■■■□ 3.91
TSEN54-209ENST00000583454 CCNB3Q8WWL7 1395 aa39.46■■■■□ 3.91
TSEN54-209ENST00000583454 PLEKHH2Q8IVE3 1493 aa39.44■■■■□ 3.9
TSEN54-209ENST00000583454 HNRNPMP52272 730 aaKnown RBP eCLIP39.43■■■■□ 3.9
TSEN54-209ENST00000583454 ATP7AQ04656 1500 aa39.43■■■■□ 3.9
TSEN54-209ENST00000583454 CFDP1Q9UEE9 299 aaPredicted RBP39.41■■■■□ 3.9
TSEN54-209ENST00000583454 PLXNC1O60486 1568 aa39.38■■■■□ 3.9
TSEN54-209ENST00000583454 FBXO41Q8TF61 875 aa39.38■■■■□ 3.89
TSEN54-209ENST00000583454 SPAG9O60271 1321 aaKnown RBP39.38■■■■□ 3.89
TSEN54-209ENST00000583454 SUPT6HQ7KZ85 1726 aaKnown RBP39.37■■■■□ 3.89
TSEN54-209ENST00000583454 STRCQ7RTU9 1775 aa39.36■■■■□ 3.89
TSEN54-209ENST00000583454 MROH2AA6NES4 1674 aa39.32■■■■□ 3.89
TSEN54-209ENST00000583454 UHRF1BP1Q6BDS2 1440 aa39.31■■■■□ 3.88
TSEN54-209ENST00000583454 CNTLNQ9NXG0 1405 aa39.3■■■■□ 3.88
TSEN54-209ENST00000583454 MBD5Q9P267 1494 aa39.3■■■■□ 3.88
TSEN54-209ENST00000583454 ZNF644Q9H582 1327 aaPredicted RBP39.29■■■■□ 3.88
TSEN54-209ENST00000583454 A2MP01023 1474 aa39.26■■■■□ 3.88
TSEN54-209ENST00000583454 ADGBQ8N7X0 1667 aa39.25■■■■□ 3.87
TSEN54-209ENST00000583454 ESF1Q9H501 851 aaKnown RBP39.21■■■■□ 3.87
TSEN54-209ENST00000583454 NCOA2Q15596 1464 aa39.21■■■■□ 3.87
TSEN54-209ENST00000583454 CLTCQ00610 1675 aaKnown RBP39.2■■■■□ 3.87
TSEN54-209ENST00000583454 MAP3K1Q13233 1512 aa39.18■■■■□ 3.86
TSEN54-209ENST00000583454 NPATQ14207 1427 aa39.13■■■■□ 3.85
TSEN54-209ENST00000583454 RTEL1-TNFRSF6BF6WH68 1400 aa39.12■■■■□ 3.85
TSEN54-209ENST00000583454 CAMSAP2Q08AD1 1489 aa39.11■■■■□ 3.85
TSEN54-209ENST00000583454 ZMYM3Q14202 1370 aa39.11■■■■□ 3.85
TSEN54-209ENST00000583454 CCDC141Q6ZP82 1450 aa39.06■■■■□ 3.84
TSEN54-209ENST00000583454 LRRC9Q6ZRR7 1453 aa39.06■■■■□ 3.84
TSEN54-209ENST00000583454 CERKQ8TCT0 537 aa39.06■■■■□ 3.84
TSEN54-209ENST00000583454 MYO3AQ8NEV4 1616 aa39.02■■■■□ 3.84
TSEN54-209ENST00000583454 ZNF142P52746 1687 aaPredicted RBP39.01■■■■□ 3.84
TSEN54-209ENST00000583454 PTPRTO14522 1441 aa39.01■■■■□ 3.84
TSEN54-209ENST00000583454 NCOA1Q15788 1441 aa39.01■■■■□ 3.84
TSEN54-209ENST00000583454 DMRT2Q9Y5R5 561 aa39.01■■■■□ 3.84
TSEN54-209ENST00000583454 ARHGEF5Q12774 1597 aa39■■■■□ 3.83
TSEN54-209ENST00000583454 PTPRKQ15262 1439 aa39■■■■□ 3.83
TSEN54-209ENST00000583454 KANK4Q5T7N3 995 aaPredicted RBP39■■■■□ 3.83
TSEN54-209ENST00000583454 DHX29Q7Z478 1369 aaKnown RBP38.99■■■■□ 3.83
TSEN54-209ENST00000583454 GGT6Q6P531 493 aa38.99■■■■□ 3.83
TSEN54-209ENST00000583454 APLP2Q06481 763 aa38.98■■■■□ 3.83
TSEN54-209ENST00000583454 CAMSAP1Q5T5Y3 1602 aa38.96■■■■□ 3.83
TSEN54-209ENST00000583454 PPP6R1Q9UPN7 881 aa38.93■■■■□ 3.82
TSEN54-209ENST00000583454 CEP170BQ9Y4F5 1589 aaPredicted RBP38.9■■■■□ 3.82
TSEN54-209ENST00000583454 RSPH4AQ5TD94 716 aa38.89■■■■□ 3.82
TSEN54-209ENST00000583454 LTBP4Q8N2S1 1624 aa38.85■■■■□ 3.81
TSEN54-209ENST00000583454 FAM135AQ9P2D6 1515 aa38.84■■■■□ 3.81
TSEN54-209ENST00000583454 MAST1Q9Y2H9 1570 aa38.84■■■■□ 3.81
TSEN54-209ENST00000583454 KDM5DQ9BY66 1539 aa38.81■■■■□ 3.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms