RNA–Protein interactions for RNA: ENST00000583391.1

ERBB2-215, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-215ENST00000583391 FANCAO15360 1455 aa20.33■□□□□ 0.85
ERBB2-215ENST00000583391 GPATCH8Q9UKJ3 1502 aaKnown RBP20.32■□□□□ 0.84
ERBB2-215ENST00000583391 KDM6BO15054 1643 aa20.31■□□□□ 0.84
ERBB2-215ENST00000583391 NEO1Q92859 1461 aa20.3■□□□□ 0.84
ERBB2-215ENST00000583391 SAMD9LQ8IVG5 1584 aa20.29■□□□□ 0.84
ERBB2-215ENST00000583391 PPARGC1BQ86YN6 1023 aaKnown RBP20.29■□□□□ 0.84
ERBB2-215ENST00000583391 ABCC1P33527 1531 aa20.26■□□□□ 0.83
ERBB2-215ENST00000583391 MYOM3Q5VTT5 1437 aa20.26■□□□□ 0.83
ERBB2-215ENST00000583391 PHLDB1Q86UU1 1377 aa20.25■□□□□ 0.83
ERBB2-215ENST00000583391 AKNAQ7Z591 1439 aa20.25■□□□□ 0.83
ERBB2-215ENST00000583391 RICTORQ6R327 1708 aa20.24■□□□□ 0.83
ERBB2-215ENST00000583391 ADGRL1O94910 1474 aa20.24■□□□□ 0.83
ERBB2-215ENST00000583391 SYCP2Q9BX26 1530 aa20.22■□□□□ 0.83
ERBB2-215ENST00000583391 FRMPD1Q5SYB0 1578 aa20.22■□□□□ 0.83
ERBB2-215ENST00000583391 PTPN23Q9H3S7 1636 aa20.22■□□□□ 0.83
ERBB2-215ENST00000583391 EFCAB2Q5VUJ9 269 aa20.21■□□□□ 0.83
ERBB2-215ENST00000583391 CFDP1Q9UEE9 299 aaPredicted RBP20.21■□□□□ 0.83
ERBB2-215ENST00000583391 CAMSAP2Q08AD1 1489 aa20.21■□□□□ 0.83
ERBB2-215ENST00000583391 COL17A1Q9UMD9 1497 aaPredicted RBP20.19■□□□□ 0.82
ERBB2-215ENST00000583391 ZNF777Q9ULD5 760 aaPredicted RBP20.19■□□□□ 0.82
ERBB2-215ENST00000583391 FGD6Q6ZV73 1430 aa20.18■□□□□ 0.82
ERBB2-215ENST00000583391 MIA2Q96PC5 1412 aa20.17■□□□□ 0.82
ERBB2-215ENST00000583391 ARHGEF12Q9NZN5 1544 aa20.17■□□□□ 0.82
ERBB2-215ENST00000583391 SCAPERQ9BY12 1400 aa20.16■□□□□ 0.82
ERBB2-215ENST00000583391 DENND4BO75064 1496 aaPredicted RBP20.16■□□□□ 0.82
ERBB2-215ENST00000583391 PLEKHH2Q8IVE3 1493 aa20.16■□□□□ 0.82
ERBB2-215ENST00000583391 POGZQ7Z3K3 1410 aa20.15■□□□□ 0.82
ERBB2-215ENST00000583391 CROCC2H7BZ55 1655 aa20.14■□□□□ 0.81
ERBB2-215ENST00000583391 ZNF644Q9H582 1327 aaPredicted RBP20.13■□□□□ 0.81
ERBB2-215ENST00000583391 KDM5CP41229 1560 aa20.12■□□□□ 0.81
ERBB2-215ENST00000583391 ZMYM4Q5VZL5 1548 aa20.12■□□□□ 0.81
ERBB2-215ENST00000583391 TCOF1Q13428 1488 aaKnown RBP20.11■□□□□ 0.81
ERBB2-215ENST00000583391 ZNF518AQ6AHZ1 1483 aa20.11■□□□□ 0.81
ERBB2-215ENST00000583391 ARHGEF5Q12774 1597 aa20.11■□□□□ 0.81
ERBB2-215ENST00000583391 HECW2Q9P2P5 1572 aa20.11■□□□□ 0.81
ERBB2-215ENST00000583391 KIAA1107Q9UPP5 1409 aa20.1■□□□□ 0.81
ERBB2-215ENST00000583391 TRAPPC8Q9Y2L5 1435 aa20.1■□□□□ 0.81
ERBB2-215ENST00000583391 RAPGEF3O95398 923 aa20.09■□□□□ 0.81
ERBB2-215ENST00000583391 DNMT1P26358 1616 aaKnown RBP20.09■□□□□ 0.81
ERBB2-215ENST00000583391 CCDC141Q6ZP82 1450 aa20.07■□□□□ 0.8
ERBB2-215ENST00000583391 MBD5Q9P267 1494 aa20.07■□□□□ 0.8
ERBB2-215ENST00000583391 INO80Q9ULG1 1556 aaPredicted RBP20.07■□□□□ 0.8
ERBB2-215ENST00000583391 ARHGEF40Q8TER5 1519 aa20.07■□□□□ 0.8
ERBB2-215ENST00000583391 KIDINS220Q9ULH0 1771 aa20.06■□□□□ 0.8
ERBB2-215ENST00000583391 HNRNPMP52272 730 aaKnown RBP eCLIP20.06■□□□□ 0.8
ERBB2-215ENST00000583391 ZFYVE16Q7Z3T8 1539 aa20.04■□□□□ 0.8
ERBB2-215ENST00000583391 ABCA6Q8N139 1617 aa20.04■□□□□ 0.8
ERBB2-215ENST00000583391 ADGBQ8N7X0 1667 aa20.03■□□□□ 0.8
ERBB2-215ENST00000583391 RRBP1Q9P2E9 1410 aaKnown RBP20.02■□□□□ 0.8
ERBB2-215ENST00000583391 ATP7AQ04656 1500 aa20.02■□□□□ 0.8
ERBB2-215ENST00000583391 FAM50AQ14320 339 aaKnown RBP20.01■□□□□ 0.79
ERBB2-215ENST00000583391 AFAP1Q8N556 730 aa20.01■□□□□ 0.79
ERBB2-215ENST00000583391 DIP2CQ9Y2E4 1556 aa20■□□□□ 0.79
ERBB2-215ENST00000583391 MAST1Q9Y2H9 1570 aa20■□□□□ 0.79
ERBB2-215ENST00000583391 DAPK1P53355 1430 aa19.99■□□□□ 0.79
ERBB2-215ENST00000583391 MAGI2Q86UL8 1455 aa19.99■□□□□ 0.79
ERBB2-215ENST00000583391 MLH3Q9UHC1 1453 aa19.99■□□□□ 0.79
ERBB2-215ENST00000583391 YEATS2Q9ULM3 1422 aa19.98■□□□□ 0.79
ERBB2-215ENST00000583391 SHANK2Q9UPX8 1470 aa19.98■□□□□ 0.79
ERBB2-215ENST00000583391 ABCC5O15440 1437 aa19.96■□□□□ 0.79
ERBB2-215ENST00000583391 SPAG9O60271 1321 aaKnown RBP19.96■□□□□ 0.79
ERBB2-215ENST00000583391 SIGLEC1Q9BZZ2 1709 aa19.96■□□□□ 0.79
ERBB2-215ENST00000583391 PLXNC1O60486 1568 aa19.95■□□□□ 0.78
ERBB2-215ENST00000583391 C9orf84Q5VXU9 1444 aa19.95■□□□□ 0.78
ERBB2-215ENST00000583391 MYT1LQ9UL68 1186 aa19.95■□□□□ 0.78
ERBB2-215ENST00000583391 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.94■□□□□ 0.78
ERBB2-215ENST00000583391 RSPH4AQ5TD94 716 aa19.92■□□□□ 0.78
ERBB2-215ENST00000583391 RTEL1-TNFRSF6BF6WH68 1400 aa19.91■□□□□ 0.78
ERBB2-215ENST00000583391 TSPY4P0CV99 314 aa19.89■□□□□ 0.77
ERBB2-215ENST00000583391 TSPY10P0CW01 314 aa19.89■□□□□ 0.77
ERBB2-215ENST00000583391 REREQ9P2R6 1566 aa19.89■□□□□ 0.77
ERBB2-215ENST00000583391 ATP10AO60312 1499 aa19.87■□□□□ 0.77
ERBB2-215ENST00000583391 PTPRKQ15262 1439 aa19.87■□□□□ 0.77
ERBB2-215ENST00000583391 ITGAEP38570 1179 aa19.87■□□□□ 0.77
ERBB2-215ENST00000583391 ADGRL2O95490 1459 aa19.86■□□□□ 0.77
ERBB2-215ENST00000583391 CHIC2Q9UKJ5 165 aa19.85■□□□□ 0.77
ERBB2-215ENST00000583391 A2MP01023 1474 aa19.84■□□□□ 0.77
ERBB2-215ENST00000583391 GCC2Q8IWJ2 1684 aa19.84■□□□□ 0.77
ERBB2-215ENST00000583391 BCORL1Q5H9F3 1711 aa19.82■□□□□ 0.76
ERBB2-215ENST00000583391 EIF2AK4Q9P2K8 1649 aaKnown RBP19.82■□□□□ 0.76
ERBB2-215ENST00000583391 KIF15Q9NS87 1388 aa19.82■□□□□ 0.76
ERBB2-215ENST00000583391 DUOX2Q9NRD8 1548 aa19.81■□□□□ 0.76
ERBB2-215ENST00000583391 ANKRD30AQ9BXX3 1397 aa19.81■□□□□ 0.76
ERBB2-215ENST00000583391 NCOA1Q15788 1441 aa19.79■□□□□ 0.76
ERBB2-215ENST00000583391 AGLP35573 1532 aa19.79■□□□□ 0.76
ERBB2-215ENST00000583391 FER1L4A9Z1Z3 1794 aa19.78■□□□□ 0.76
ERBB2-215ENST00000583391 ROCK1Q13464 1354 aa19.77■□□□□ 0.76
ERBB2-215ENST00000583391 RRP7BPQ9NSQ0 103 aa19.76■□□□□ 0.75
ERBB2-215ENST00000583391 RNF17Q9BXT8 1623 aaKnown RBP19.76■□□□□ 0.75
ERBB2-215ENST00000583391 ARID4BQ4LE39 1312 aaPredicted RBP19.76■□□□□ 0.75
ERBB2-215ENST00000583391 DHX29Q7Z478 1369 aaKnown RBP19.75■□□□□ 0.75
ERBB2-215ENST00000583391 ERBINQ96RT1 1412 aa19.74■□□□□ 0.75
ERBB2-215ENST00000583391 ADAMTSL3P82987 1691 aa19.74■□□□□ 0.75
ERBB2-215ENST00000583391 MADDQ8WXG6 1647 aa19.73■□□□□ 0.75
ERBB2-215ENST00000583391 DEPDC5O75140 1603 aa19.73■□□□□ 0.75
ERBB2-215ENST00000583391 RIMS1Q86UR5 1692 aaKnown RBP19.71■□□□□ 0.75
ERBB2-215ENST00000583391 MROH1Q8NDA8 1641 aa19.7■□□□□ 0.74
ERBB2-215ENST00000583391 CEP152O94986 1710 aa19.7■□□□□ 0.74
ERBB2-215ENST00000583391 ANKRD50Q9ULJ7 1429 aa19.69■□□□□ 0.74
ERBB2-215ENST00000583391 CLTCQ00610 1675 aaKnown RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms