RNA–Protein interactions for RNA: ENST00000582951.5

CUEDC1-211, Transcript of CUE domain containing 1, humanhuman

TSL 2

Gene CUEDC1, Length 756 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-211ENST00000582951 PTPRKQ15262 1439 aa23.47■■□□□ 1.35
CUEDC1-211ENST00000582951 CROCC2H7BZ55 1655 aa23.46■■□□□ 1.35
CUEDC1-211ENST00000582951 GCC2Q8IWJ2 1684 aa23.46■■□□□ 1.35
CUEDC1-211ENST00000582951 WDR7Q9Y4E6 1490 aa23.45■■□□□ 1.34
CUEDC1-211ENST00000582951 AKNAQ7Z591 1439 aa23.45■■□□□ 1.34
CUEDC1-211ENST00000582951 RAB3GAP2Q9H2M9 1393 aa23.45■■□□□ 1.34
CUEDC1-211ENST00000582951 CYB5RLQ6IPT4 315 aa23.45■■□□□ 1.34
CUEDC1-211ENST00000582951 HFM1A2PYH4 1435 aa23.44■■□□□ 1.34
CUEDC1-211ENST00000582951 DAPK1P53355 1430 aa23.44■■□□□ 1.34
CUEDC1-211ENST00000582951 ADGBQ8N7X0 1667 aa23.41■■□□□ 1.34
CUEDC1-211ENST00000582951 ABCC5O15440 1437 aa23.39■■□□□ 1.33
CUEDC1-211ENST00000582951 ARHGEF5Q12774 1597 aa23.38■■□□□ 1.33
CUEDC1-211ENST00000582951 SAMD9LQ8IVG5 1584 aa23.38■■□□□ 1.33
CUEDC1-211ENST00000582951 ARHGAP5Q13017 1502 aa23.38■■□□□ 1.33
CUEDC1-211ENST00000582951 ZNF644Q9H582 1327 aaPredicted RBP23.37■■□□□ 1.33
CUEDC1-211ENST00000582951 DHX57Q6P158 1386 aaKnown RBP23.37■■□□□ 1.33
CUEDC1-211ENST00000582951 NAIPQ13075 1403 aa23.36■■□□□ 1.33
CUEDC1-211ENST00000582951 ARAP3Q8WWN8 1544 aa23.36■■□□□ 1.33
CUEDC1-211ENST00000582951 ROCK1Q13464 1354 aa23.36■■□□□ 1.33
CUEDC1-211ENST00000582951 ABCA9Q8IUA7 1624 aa23.36■■□□□ 1.33
CUEDC1-211ENST00000582951 ASXL2Q76L83 1435 aa23.35■■□□□ 1.33
CUEDC1-211ENST00000582951 SHANK2Q9UPX8 1470 aa23.35■■□□□ 1.33
CUEDC1-211ENST00000582951 NPM1P06748 294 aaKnown RBP eCLIP23.34■■□□□ 1.33
CUEDC1-211ENST00000582951 ZNF777Q9ULD5 760 aaPredicted RBP23.34■■□□□ 1.33
CUEDC1-211ENST00000582951 CLSPNQ9HAW4 1339 aa23.33■■□□□ 1.33
CUEDC1-211ENST00000582951 KCNH8Q96L42 1107 aa23.33■■□□□ 1.33
CUEDC1-211ENST00000582951 PLEKHH2Q8IVE3 1493 aa23.32■■□□□ 1.32
CUEDC1-211ENST00000582951 PLCH2O75038 1416 aa23.32■■□□□ 1.32
CUEDC1-211ENST00000582951 ADGRL2O95490 1459 aa23.3■■□□□ 1.32
CUEDC1-211ENST00000582951 CHIC2Q9UKJ5 165 aa23.27■■□□□ 1.32
CUEDC1-211ENST00000582951 CCDC141Q6ZP82 1450 aa23.27■■□□□ 1.32
CUEDC1-211ENST00000582951 MBD5Q9P267 1494 aa23.26■■□□□ 1.31
CUEDC1-211ENST00000582951 SYCP2Q9BX26 1530 aa23.26■■□□□ 1.31
CUEDC1-211ENST00000582951 MAPKBP1O60336 1514 aa23.25■■□□□ 1.31
CUEDC1-211ENST00000582951 TRHP20396 242 aaPredicted RBP23.25■■□□□ 1.31
CUEDC1-211ENST00000582951 KIAA1107Q9UPP5 1409 aa23.25■■□□□ 1.31
CUEDC1-211ENST00000582951 ABCC1P33527 1531 aa23.23■■□□□ 1.31
CUEDC1-211ENST00000582951 MAST1Q9Y2H9 1570 aa23.23■■□□□ 1.31
CUEDC1-211ENST00000582951 RRP7BPQ9NSQ0 103 aa23.23■■□□□ 1.31
CUEDC1-211ENST00000582951 C9orf84Q5VXU9 1444 aa23.23■■□□□ 1.31
CUEDC1-211ENST00000582951 RSPH4AQ5TD94 716 aa23.22■■□□□ 1.31
CUEDC1-211ENST00000582951 ACIN1Q9UKV3 1341 aaKnown RBP23.22■■□□□ 1.31
CUEDC1-211ENST00000582951 EFCAB2Q5VUJ9 269 aa23.21■■□□□ 1.31
CUEDC1-211ENST00000582951 NCOA1Q15788 1441 aa23.21■■□□□ 1.31
CUEDC1-211ENST00000582951 KDM6BO15054 1643 aa23.2■■□□□ 1.3
CUEDC1-211ENST00000582951 ANKRD30AQ9BXX3 1397 aa23.2■■□□□ 1.3
CUEDC1-211ENST00000582951 AEBP2Q6ZN18 517 aaPredicted RBP23.19■■□□□ 1.3
CUEDC1-211ENST00000582951 CFAP74Q9C0B2 1584 aa23.18■■□□□ 1.3
CUEDC1-211ENST00000582951 HNRNPMP52272 730 aaKnown RBP eCLIP23.16■■□□□ 1.3
CUEDC1-211ENST00000582951 TSPY4P0CV99 314 aa23.15■■□□□ 1.3
CUEDC1-211ENST00000582951 TSPY10P0CW01 314 aa23.15■■□□□ 1.3
CUEDC1-211ENST00000582951 FANCAO15360 1455 aa23.15■■□□□ 1.3
CUEDC1-211ENST00000582951 PLXNC1O60486 1568 aa23.14■■□□□ 1.29
CUEDC1-211ENST00000582951 ARHGEF12Q9NZN5 1544 aa23.13■■□□□ 1.29
CUEDC1-211ENST00000582951 GLI2P10070 1586 aa23.1■■□□□ 1.29
CUEDC1-211ENST00000582951 CD109Q6YHK3 1445 aa23.08■■□□□ 1.28
CUEDC1-211ENST00000582951 KIF15Q9NS87 1388 aa23.07■■□□□ 1.28
CUEDC1-211ENST00000582951 MAP3K4Q9Y6R4 1608 aa23.07■■□□□ 1.28
CUEDC1-211ENST00000582951 ANKRD50Q9ULJ7 1429 aa23.07■■□□□ 1.28
CUEDC1-211ENST00000582951 ADGRL1O94910 1474 aa23.06■■□□□ 1.28
CUEDC1-211ENST00000582951 TRAPPC8Q9Y2L5 1435 aa23.04■■□□□ 1.28
CUEDC1-211ENST00000582951 DIP2BQ9P265 1576 aa23.02■■□□□ 1.28
CUEDC1-211ENST00000582951 TRIM52Q96A61 297 aa23.02■■□□□ 1.28
CUEDC1-211ENST00000582951 ZFYVE16Q7Z3T8 1539 aa23.02■■□□□ 1.28
CUEDC1-211ENST00000582951 INO80Q9ULG1 1556 aaPredicted RBP23.01■■□□□ 1.27
CUEDC1-211ENST00000582951 RTEL1-TNFRSF6BF6WH68 1400 aa23.01■■□□□ 1.27
CUEDC1-211ENST00000582951 NEO1Q92859 1461 aa23■■□□□ 1.27
CUEDC1-211ENST00000582951 DUOX2Q9NRD8 1548 aa23■■□□□ 1.27
CUEDC1-211ENST00000582951 KDM5DQ9BY66 1539 aa22.99■■□□□ 1.27
CUEDC1-211ENST00000582951 SCAPERQ9BY12 1400 aa22.99■■□□□ 1.27
CUEDC1-211ENST00000582951 DENND4BO75064 1496 aaPredicted RBP22.97■■□□□ 1.27
CUEDC1-211ENST00000582951 ATP7AQ04656 1500 aa22.97■■□□□ 1.27
CUEDC1-211ENST00000582951 UNC13BO14795 1591 aa22.96■■□□□ 1.27
CUEDC1-211ENST00000582951 PZPP20742 1482 aa22.95■■□□□ 1.26
CUEDC1-211ENST00000582951 ZNF518AQ6AHZ1 1483 aa22.95■■□□□ 1.26
CUEDC1-211ENST00000582951 ERBINQ96RT1 1412 aa22.94■■□□□ 1.26
CUEDC1-211ENST00000582951 SPAG9O60271 1321 aaKnown RBP22.94■■□□□ 1.26
CUEDC1-211ENST00000582951 MPHOSPH9Q99550 1183 aa22.93■■□□□ 1.26
CUEDC1-211ENST00000582951 KDM5CP41229 1560 aa22.93■■□□□ 1.26
CUEDC1-211ENST00000582951 POGZQ7Z3K3 1410 aa22.91■■□□□ 1.26
CUEDC1-211ENST00000582951 KIDINS220Q9ULH0 1771 aa22.89■■□□□ 1.25
CUEDC1-211ENST00000582951 AFAP1Q8N556 730 aa22.88■■□□□ 1.25
CUEDC1-211ENST00000582951 TIMELESSQ9UNS1 1208 aa22.88■■□□□ 1.25
CUEDC1-211ENST00000582951 HECW2Q9P2P5 1572 aa22.88■■□□□ 1.25
CUEDC1-211ENST00000582951 KIF13AQ9H1H9 1805 aa22.87■■□□□ 1.25
CUEDC1-211ENST00000582951 EIF2AK4Q9P2K8 1649 aaKnown RBP22.86■■□□□ 1.25
CUEDC1-211ENST00000582951 SLC4A1APQ9BWU0 796 aaKnown RBP22.86■■□□□ 1.25
CUEDC1-211ENST00000582951 PPRC1Q5VV67 1664 aaKnown RBP22.86■■□□□ 1.25
CUEDC1-211ENST00000582951 IQGAP3Q86VI3 1631 aa22.86■■□□□ 1.25
CUEDC1-211ENST00000582951 MAGI2Q86UL8 1455 aa22.85■■□□□ 1.25
CUEDC1-211ENST00000582951 SIN3AQ96ST3 1273 aa22.85■■□□□ 1.25
CUEDC1-211ENST00000582951 NUP155O75694 1391 aa22.85■■□□□ 1.25
CUEDC1-211ENST00000582951 RICTORQ6R327 1708 aa22.84■■□□□ 1.25
CUEDC1-211ENST00000582951 FAM69CQ0P6D2 419 aa22.83■■□□□ 1.25
CUEDC1-211ENST00000582951 TEX14Q8IWB6 1497 aa22.83■■□□□ 1.25
CUEDC1-211ENST00000582951 MLH3Q9UHC1 1453 aa22.83■■□□□ 1.25
CUEDC1-211ENST00000582951 TSPOAP1O95153 1857 aa22.83■■□□□ 1.24
CUEDC1-211ENST00000582951 FAM135AQ9P2D6 1515 aa22.82■■□□□ 1.24
CUEDC1-211ENST00000582951 NEUROD1Q13562 356 aa22.82■■□□□ 1.24
CUEDC1-211ENST00000582951 DEPDC5O75140 1603 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms