RNA–Protein interactions for RNA: ENST00000582681.1

NUP85-218, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-218ENST00000582681 AKNAQ7Z591 1439 aa12.4□□□□□ -0.42
NUP85-218ENST00000582681 ATP1B4Q9UN42 357 aaPredicted RBP12.4□□□□□ -0.42
NUP85-218ENST00000582681 GPATCH8Q9UKJ3 1502 aaKnown RBP12.4□□□□□ -0.42
NUP85-218ENST00000582681 SUPT6HQ7KZ85 1726 aaKnown RBP12.39□□□□□ -0.43
NUP85-218ENST00000582681 ABCC1P33527 1531 aa12.37□□□□□ -0.43
NUP85-218ENST00000582681 KDM5CP41229 1560 aa12.37□□□□□ -0.43
NUP85-218ENST00000582681 ITSN2Q9NZM3 1697 aa12.37□□□□□ -0.43
NUP85-218ENST00000582681 POGZQ7Z3K3 1410 aa12.37□□□□□ -0.43
NUP85-218ENST00000582681 DENND4BO75064 1496 aaPredicted RBP12.36□□□□□ -0.43
NUP85-218ENST00000582681 ADGRL1O94910 1474 aa12.36□□□□□ -0.43
NUP85-218ENST00000582681 NCOA2Q15596 1464 aa12.36□□□□□ -0.43
NUP85-218ENST00000582681 ARHGAP5Q13017 1502 aa12.36□□□□□ -0.43
NUP85-218ENST00000582681 MAGI2Q86UL8 1455 aa12.35□□□□□ -0.43
NUP85-218ENST00000582681 EFCAB2Q5VUJ9 269 aa12.35□□□□□ -0.43
NUP85-218ENST00000582681 KIAA1107Q9UPP5 1409 aa12.35□□□□□ -0.43
NUP85-218ENST00000582681 SAMD9LQ8IVG5 1584 aa12.35□□□□□ -0.43
NUP85-218ENST00000582681 ZNF518AQ6AHZ1 1483 aa12.34□□□□□ -0.43
NUP85-218ENST00000582681 ARHGEF40Q8TER5 1519 aa12.33□□□□□ -0.44
NUP85-218ENST00000582681 PLEKHH2Q8IVE3 1493 aa12.33□□□□□ -0.44
NUP85-218ENST00000582681 ARHGEF12Q9NZN5 1544 aa12.32□□□□□ -0.44
NUP85-218ENST00000582681 CCNB3Q8WWL7 1395 aa12.32□□□□□ -0.44
NUP85-218ENST00000582681 SCAPERQ9BY12 1400 aa12.32□□□□□ -0.44
NUP85-218ENST00000582681 KANK4Q5T7N3 995 aaPredicted RBP12.31□□□□□ -0.44
NUP85-218ENST00000582681 MIA2Q96PC5 1412 aa12.3□□□□□ -0.44
NUP85-218ENST00000582681 MLH3Q9UHC1 1453 aa12.3□□□□□ -0.44
NUP85-218ENST00000582681 MBD5Q9P267 1494 aa12.29□□□□□ -0.44
NUP85-218ENST00000582681 REREQ9P2R6 1566 aa12.29□□□□□ -0.44
NUP85-218ENST00000582681 MYOM3Q5VTT5 1437 aa12.28□□□□□ -0.44
NUP85-218ENST00000582681 SYCP2Q9BX26 1530 aa12.28□□□□□ -0.44
NUP85-218ENST00000582681 RAPGEF3O95398 923 aa12.28□□□□□ -0.44
NUP85-218ENST00000582681 TRAPPC8Q9Y2L5 1435 aa12.28□□□□□ -0.44
NUP85-218ENST00000582681 HECW2Q9P2P5 1572 aa12.27□□□□□ -0.44
NUP85-218ENST00000582681 ZFYVE16Q7Z3T8 1539 aa12.27□□□□□ -0.45
NUP85-218ENST00000582681 ARHGEF5Q12774 1597 aa12.26□□□□□ -0.45
NUP85-218ENST00000582681 INO80Q9ULG1 1556 aaPredicted RBP12.26□□□□□ -0.45
NUP85-218ENST00000582681 CFDP1Q9UEE9 299 aaPredicted RBP12.26□□□□□ -0.45
NUP85-218ENST00000582681 CAMSAP2Q08AD1 1489 aa12.26□□□□□ -0.45
NUP85-218ENST00000582681 TCOF1Q13428 1488 aaKnown RBP12.25□□□□□ -0.45
NUP85-218ENST00000582681 KIDINS220Q9ULH0 1771 aa12.25□□□□□ -0.45
NUP85-218ENST00000582681 YEATS2Q9ULM3 1422 aa12.24□□□□□ -0.45
NUP85-218ENST00000582681 DIP2CQ9Y2E4 1556 aa12.23□□□□□ -0.45
NUP85-218ENST00000582681 RTEL1-TNFRSF6BF6WH68 1400 aa12.23□□□□□ -0.45
NUP85-218ENST00000582681 FGD6Q6ZV73 1430 aa12.22□□□□□ -0.45
NUP85-218ENST00000582681 APLP2Q06481 763 aa12.22□□□□□ -0.45
NUP85-218ENST00000582681 SIGLEC1Q9BZZ2 1709 aa12.22□□□□□ -0.45
NUP85-218ENST00000582681 ABCA6Q8N139 1617 aa12.22□□□□□ -0.45
NUP85-218ENST00000582681 MAST1Q9Y2H9 1570 aa12.22□□□□□ -0.45
NUP85-218ENST00000582681 AGLP35573 1532 aa12.21□□□□□ -0.45
NUP85-218ENST00000582681 ATP10AO60312 1499 aa12.21□□□□□ -0.45
NUP85-218ENST00000582681 CCDC141Q6ZP82 1450 aa12.21□□□□□ -0.45
NUP85-218ENST00000582681 RSPH4AQ5TD94 716 aa12.21□□□□□ -0.45
NUP85-218ENST00000582681 PLXNC1O60486 1568 aa12.21□□□□□ -0.46
NUP85-218ENST00000582681 ATP7AQ04656 1500 aa12.21□□□□□ -0.46
NUP85-218ENST00000582681 ZNF644Q9H582 1327 aaPredicted RBP12.2□□□□□ -0.46
NUP85-218ENST00000582681 AFAP1Q8N556 730 aa12.2□□□□□ -0.46
NUP85-218ENST00000582681 C9orf84Q5VXU9 1444 aa12.2□□□□□ -0.46
NUP85-218ENST00000582681 ADAMTSL3P82987 1691 aa12.19□□□□□ -0.46
NUP85-218ENST00000582681 PTPN23Q9H3S7 1636 aa12.19□□□□□ -0.46
NUP85-218ENST00000582681 SHANK2Q9UPX8 1470 aa12.19□□□□□ -0.46
NUP85-218ENST00000582681 BCORL1Q5H9F3 1711 aa12.18□□□□□ -0.46
NUP85-218ENST00000582681 AEBP2Q6ZN18 517 aaPredicted RBP12.18□□□□□ -0.46
NUP85-218ENST00000582681 CROCC2H7BZ55 1655 aa12.17□□□□□ -0.46
NUP85-218ENST00000582681 DNMT1P26358 1616 aaKnown RBP12.17□□□□□ -0.46
NUP85-218ENST00000582681 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.17□□□□□ -0.46
NUP85-218ENST00000582681 ADGBQ8N7X0 1667 aa12.16□□□□□ -0.46
NUP85-218ENST00000582681 HNRNPMP52272 730 aaKnown RBP eCLIP12.16□□□□□ -0.46
NUP85-218ENST00000582681 SPAG9O60271 1321 aaKnown RBP12.15□□□□□ -0.46
NUP85-218ENST00000582681 KDM4FA0A1W2PPD8 638 aa12.15□□□□□ -0.46
NUP85-218ENST00000582681 ZNF777Q9ULD5 760 aaPredicted RBP12.15□□□□□ -0.46
NUP85-218ENST00000582681 ABCC5O15440 1437 aa12.13□□□□□ -0.47
NUP85-218ENST00000582681 ADGRL2O95490 1459 aa12.12□□□□□ -0.47
NUP85-218ENST00000582681 A2MP01023 1474 aa12.12□□□□□ -0.47
NUP85-218ENST00000582681 DAPK1P53355 1430 aa12.11□□□□□ -0.47
NUP85-218ENST00000582681 RRBP1Q9P2E9 1410 aaKnown RBP12.11□□□□□ -0.47
NUP85-218ENST00000582681 FAM135AQ9P2D6 1515 aa12.11□□□□□ -0.47
NUP85-218ENST00000582681 DHX29Q7Z478 1369 aaKnown RBP12.09□□□□□ -0.47
NUP85-218ENST00000582681 EIF2AK4Q9P2K8 1649 aaKnown RBP12.09□□□□□ -0.47
NUP85-218ENST00000582681 MADDQ8WXG6 1647 aa12.08□□□□□ -0.48
NUP85-218ENST00000582681 RNF17Q9BXT8 1623 aaKnown RBP12.08□□□□□ -0.48
NUP85-218ENST00000582681 DUOX2Q9NRD8 1548 aa12.06□□□□□ -0.48
NUP85-218ENST00000582681 NCOA1Q15788 1441 aa12.06□□□□□ -0.48
NUP85-218ENST00000582681 FER1L4A9Z1Z3 1794 aa12.06□□□□□ -0.48
NUP85-218ENST00000582681 TSPY4P0CV99 314 aa12.06□□□□□ -0.48
NUP85-218ENST00000582681 TSPY10P0CW01 314 aa12.06□□□□□ -0.48
NUP85-218ENST00000582681 PTPRMP28827 1452 aa12.06□□□□□ -0.48
NUP85-218ENST00000582681 MROH2AA6NES4 1674 aa12.06□□□□□ -0.48
NUP85-218ENST00000582681 ERBINQ96RT1 1412 aa12.05□□□□□ -0.48
NUP85-218ENST00000582681 PPP6R1Q9UPN7 881 aa12.05□□□□□ -0.48
NUP85-218ENST00000582681 ROCK1Q13464 1354 aa12.05□□□□□ -0.48
NUP85-218ENST00000582681 CNTLNQ9NXG0 1405 aa12.04□□□□□ -0.48
NUP85-218ENST00000582681 KDM5DQ9BY66 1539 aa12.04□□□□□ -0.48
NUP85-218ENST00000582681 DEPDC5O75140 1603 aa12.04□□□□□ -0.48
NUP85-218ENST00000582681 MROH1Q8NDA8 1641 aa12.04□□□□□ -0.48
NUP85-218ENST00000582681 PTPRKQ15262 1439 aa12.03□□□□□ -0.48
NUP85-218ENST00000582681 RIMS1Q86UR5 1692 aaKnown RBP12.03□□□□□ -0.48
NUP85-218ENST00000582681 KIF15Q9NS87 1388 aa12.03□□□□□ -0.48
NUP85-218ENST00000582681 PRDM15P57071 1507 aaPredicted RBP12.02□□□□□ -0.48
NUP85-218ENST00000582681 ANKRD30AQ9BXX3 1397 aa12.02□□□□□ -0.49
NUP85-218ENST00000582681 ARID4BQ4LE39 1312 aaPredicted RBP12.01□□□□□ -0.49
NUP85-218ENST00000582681 VWDEQ8N2E2 1590 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms