RNA–Protein interactions for RNA: ENST00000582583.4

CCDC144NL-AS1-216, CCDC144NL antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene CCDC144NL-AS1, Length 1,670 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-AS1-216ENST00000582583 FANCAO15360 1455 aa19.29■□□□□ 0.68
CCDC144NL-AS1-216ENST00000582583 NEO1Q92859 1461 aa19.29■□□□□ 0.68
CCDC144NL-AS1-216ENST00000582583 CFAP74Q9C0B2 1584 aa19.28■□□□□ 0.68
CCDC144NL-AS1-216ENST00000582583 KDM6BO15054 1643 aa19.28■□□□□ 0.68
CCDC144NL-AS1-216ENST00000582583 PREX2Q70Z35 1606 aa19.28■□□□□ 0.68
CCDC144NL-AS1-216ENST00000582583 NCOA2Q15596 1464 aa19.28■□□□□ 0.68
CCDC144NL-AS1-216ENST00000582583 CCNB3Q8WWL7 1395 aa19.28■□□□□ 0.68
CCDC144NL-AS1-216ENST00000582583 ARHGAP5Q13017 1502 aa19.27■□□□□ 0.68
CCDC144NL-AS1-216ENST00000582583 CDC42BPAQ5VT25 1732 aa19.27■□□□□ 0.68
CCDC144NL-AS1-216ENST00000582583 PHLDB1Q86UU1 1377 aa19.27■□□□□ 0.68
CCDC144NL-AS1-216ENST00000582583 CDC42BPBQ9Y5S2 1711 aa19.26■□□□□ 0.67
CCDC144NL-AS1-216ENST00000582583 EFCAB2Q5VUJ9 269 aa19.26■□□□□ 0.67
CCDC144NL-AS1-216ENST00000582583 GPATCH8Q9UKJ3 1502 aaKnown RBP19.26■□□□□ 0.67
CCDC144NL-AS1-216ENST00000582583 AKNAQ7Z591 1439 aa19.24■□□□□ 0.67
CCDC144NL-AS1-216ENST00000582583 COL17A1Q9UMD9 1497 aaPredicted RBP19.23■□□□□ 0.67
CCDC144NL-AS1-216ENST00000582583 ITSN2Q9NZM3 1697 aa19.22■□□□□ 0.67
CCDC144NL-AS1-216ENST00000582583 CFDP1Q9UEE9 299 aaPredicted RBP19.2■□□□□ 0.66
CCDC144NL-AS1-216ENST00000582583 ADGRL1O94910 1474 aa19.2■□□□□ 0.66
CCDC144NL-AS1-216ENST00000582583 ZNF777Q9ULD5 760 aaPredicted RBP19.17■□□□□ 0.66
CCDC144NL-AS1-216ENST00000582583 SCAPERQ9BY12 1400 aa19.17■□□□□ 0.66
CCDC144NL-AS1-216ENST00000582583 DENND4BO75064 1496 aaPredicted RBP19.16■□□□□ 0.66
CCDC144NL-AS1-216ENST00000582583 SAMD9LQ8IVG5 1584 aa19.15■□□□□ 0.66
CCDC144NL-AS1-216ENST00000582583 MYOM3Q5VTT5 1437 aa19.14■□□□□ 0.66
CCDC144NL-AS1-216ENST00000582583 RAPGEF3O95398 923 aa19.14■□□□□ 0.66
CCDC144NL-AS1-216ENST00000582583 ABCC1P33527 1531 aa19.14■□□□□ 0.66
CCDC144NL-AS1-216ENST00000582583 PPARGC1BQ86YN6 1023 aaKnown RBP19.14■□□□□ 0.65
CCDC144NL-AS1-216ENST00000582583 FRMPD1Q5SYB0 1578 aa19.12■□□□□ 0.65
CCDC144NL-AS1-216ENST00000582583 RICTORQ6R327 1708 aa19.12■□□□□ 0.65
CCDC144NL-AS1-216ENST00000582583 POGZQ7Z3K3 1410 aa19.12■□□□□ 0.65
CCDC144NL-AS1-216ENST00000582583 PLEKHH2Q8IVE3 1493 aa19.11■□□□□ 0.65
CCDC144NL-AS1-216ENST00000582583 MIA2Q96PC5 1412 aa19.1■□□□□ 0.65
CCDC144NL-AS1-216ENST00000582583 ZNF644Q9H582 1327 aaPredicted RBP19.1■□□□□ 0.65
CCDC144NL-AS1-216ENST00000582583 SYCP2Q9BX26 1530 aa19.1■□□□□ 0.65
CCDC144NL-AS1-216ENST00000582583 ARHGEF12Q9NZN5 1544 aa19.1■□□□□ 0.65
CCDC144NL-AS1-216ENST00000582583 KIAA1107Q9UPP5 1409 aa19.09■□□□□ 0.65
CCDC144NL-AS1-216ENST00000582583 CAMSAP2Q08AD1 1489 aa19.09■□□□□ 0.65
CCDC144NL-AS1-216ENST00000582583 ZNF518AQ6AHZ1 1483 aa19.08■□□□□ 0.65
CCDC144NL-AS1-216ENST00000582583 TRAPPC8Q9Y2L5 1435 aa19.07■□□□□ 0.64
CCDC144NL-AS1-216ENST00000582583 HNRNPMP52272 730 aaKnown RBP eCLIP19.07■□□□□ 0.647e-6■■□□□ 11.4
CCDC144NL-AS1-216ENST00000582583 AFAP1Q8N556 730 aa19.06■□□□□ 0.64
CCDC144NL-AS1-216ENST00000582583 FGD6Q6ZV73 1430 aa19.06■□□□□ 0.64
CCDC144NL-AS1-216ENST00000582583 ZMYM4Q5VZL5 1548 aa19.05■□□□□ 0.64
CCDC144NL-AS1-216ENST00000582583 KDM5CP41229 1560 aa19.04■□□□□ 0.64
CCDC144NL-AS1-216ENST00000582583 PTPN23Q9H3S7 1636 aa19.03■□□□□ 0.64
CCDC144NL-AS1-216ENST00000582583 MBD5Q9P267 1494 aa19.03■□□□□ 0.64
CCDC144NL-AS1-216ENST00000582583 MAGI2Q86UL8 1455 aa19.02■□□□□ 0.63
CCDC144NL-AS1-216ENST00000582583 MSH5O43196 834 aa19■□□□□ 0.63
CCDC144NL-AS1-216ENST00000582583 HECW2Q9P2P5 1572 aa19■□□□□ 0.63
CCDC144NL-AS1-216ENST00000582583 TCOF1Q13428 1488 aaKnown RBP19■□□□□ 0.63
CCDC144NL-AS1-216ENST00000582583 MYT1LQ9UL68 1186 aa18.99■□□□□ 0.63
CCDC144NL-AS1-216ENST00000582583 ZFYVE16Q7Z3T8 1539 aa18.99■□□□□ 0.63
CCDC144NL-AS1-216ENST00000582583 ARHGEF5Q12774 1597 aa18.99■□□□□ 0.63
CCDC144NL-AS1-216ENST00000582583 RSPH4AQ5TD94 716 aa18.98■□□□□ 0.63
CCDC144NL-AS1-216ENST00000582583 ARHGEF40Q8TER5 1519 aa18.98■□□□□ 0.63
CCDC144NL-AS1-216ENST00000582583 CCDC141Q6ZP82 1450 aa18.98■□□□□ 0.63
CCDC144NL-AS1-216ENST00000582583 MLH3Q9UHC1 1453 aa18.98■□□□□ 0.63
CCDC144NL-AS1-216ENST00000582583 YEATS2Q9ULM3 1422 aa18.97■□□□□ 0.63
CCDC144NL-AS1-216ENST00000582583 SPAG9O60271 1321 aaKnown RBP18.97■□□□□ 0.63
CCDC144NL-AS1-216ENST00000582583 FAM50AQ14320 339 aaKnown RBP18.95■□□□□ 0.62
CCDC144NL-AS1-216ENST00000582583 KIDINS220Q9ULH0 1771 aa18.94■□□□□ 0.62
CCDC144NL-AS1-216ENST00000582583 HRCP23327 699 aa18.94■□□□□ 0.62
CCDC144NL-AS1-216ENST00000582583 ATP7AQ04656 1500 aa18.93■□□□□ 0.62
CCDC144NL-AS1-216ENST00000582583 INO80Q9ULG1 1556 aaPredicted RBP18.93■□□□□ 0.62
CCDC144NL-AS1-216ENST00000582583 TSPY4P0CV99 314 aa18.92■□□□□ 0.62
CCDC144NL-AS1-216ENST00000582583 TSPY10P0CW01 314 aa18.92■□□□□ 0.62
CCDC144NL-AS1-216ENST00000582583 PCGF6Q9BYE7 350 aa18.92■□□□□ 0.62
CCDC144NL-AS1-216ENST00000582583 ABCA6Q8N139 1617 aa18.91■□□□□ 0.62
CCDC144NL-AS1-216ENST00000582583 DIP2CQ9Y2E4 1556 aa18.91■□□□□ 0.62
CCDC144NL-AS1-216ENST00000582583 DNMT1P26358 1616 aaKnown RBP18.91■□□□□ 0.62
CCDC144NL-AS1-216ENST00000582583 RTEL1-TNFRSF6BF6WH68 1400 aa18.91■□□□□ 0.62
CCDC144NL-AS1-216ENST00000582583 ATP10AO60312 1499 aa18.9■□□□□ 0.62
CCDC144NL-AS1-216ENST00000582583 ABCC5O15440 1437 aa18.9■□□□□ 0.62
CCDC144NL-AS1-216ENST00000582583 DAPK1P53355 1430 aa18.9■□□□□ 0.62
CCDC144NL-AS1-216ENST00000582583 RRBP1Q9P2E9 1410 aaKnown RBP18.89■□□□□ 0.61
CCDC144NL-AS1-216ENST00000582583 C9orf84Q5VXU9 1444 aa18.89■□□□□ 0.61
CCDC144NL-AS1-216ENST00000582583 CROCC2H7BZ55 1655 aa18.88■□□□□ 0.61
CCDC144NL-AS1-216ENST00000582583 MAST1Q9Y2H9 1570 aa18.87■□□□□ 0.61
CCDC144NL-AS1-216ENST00000582583 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.87■□□□□ 0.61
CCDC144NL-AS1-216ENST00000582583 SHANK2Q9UPX8 1470 aa18.86■□□□□ 0.61
CCDC144NL-AS1-216ENST00000582583 REREQ9P2R6 1566 aa18.85■□□□□ 0.61
CCDC144NL-AS1-216ENST00000582583 ARID4BQ4LE39 1312 aaPredicted RBP18.85■□□□□ 0.61
CCDC144NL-AS1-216ENST00000582583 SIGLEC1Q9BZZ2 1709 aa18.84■□□□□ 0.61
CCDC144NL-AS1-216ENST00000582583 ADGBQ8N7X0 1667 aa18.83■□□□□ 0.61
CCDC144NL-AS1-216ENST00000582583 TRIM26Q12899 539 aaPredicted RBP18.82■□□□□ 0.6
CCDC144NL-AS1-216ENST00000582583 A2MP01023 1474 aa18.82■□□□□ 0.6
CCDC144NL-AS1-216ENST00000582583 PLXNC1O60486 1568 aa18.81■□□□□ 0.6
CCDC144NL-AS1-216ENST00000582583 CHIC2Q9UKJ5 165 aa18.81■□□□□ 0.6
CCDC144NL-AS1-216ENST00000582583 ITGAEP38570 1179 aa18.79■□□□□ 0.6
CCDC144NL-AS1-216ENST00000582583 AGLP35573 1532 aa18.79■□□□□ 0.6
CCDC144NL-AS1-216ENST00000582583 PTPRKQ15262 1439 aa18.78■□□□□ 0.6
CCDC144NL-AS1-216ENST00000582583 DHX29Q7Z478 1369 aaKnown RBP18.78■□□□□ 0.6
CCDC144NL-AS1-216ENST00000582583 ANKRD30AQ9BXX3 1397 aa18.78■□□□□ 0.6
CCDC144NL-AS1-216ENST00000582583 BCORL1Q5H9F3 1711 aa18.77■□□□□ 0.6
CCDC144NL-AS1-216ENST00000582583 ADGRL2O95490 1459 aa18.77■□□□□ 0.59
CCDC144NL-AS1-216ENST00000582583 KIF15Q9NS87 1388 aa18.76■□□□□ 0.59
CCDC144NL-AS1-216ENST00000582583 NCOA1Q15788 1441 aa18.76■□□□□ 0.59
CCDC144NL-AS1-216ENST00000582583 RRP7BPQ9NSQ0 103 aa18.76■□□□□ 0.59
CCDC144NL-AS1-216ENST00000582583 MLECQ14165 292 aa18.75■□□□□ 0.59
CCDC144NL-AS1-216ENST00000582583 DUOX2Q9NRD8 1548 aa18.74■□□□□ 0.59
CCDC144NL-AS1-216ENST00000582583 KDM4FA0A1W2PPD8 638 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms