RNA–Protein interactions for RNA: ENST00000582475.1

SNRPD1-204, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 3 BASIC

Gene SNRPD1, Length 723 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-204ENST00000582475 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.86■□□□□ 0.611e-17■□□□□ 8.5
SNRPD1-204ENST00000582475 KANK4Q5T7N3 995 aaPredicted RBP18.86■□□□□ 0.61
SNRPD1-204ENST00000582475 CFAP43Q8NDM7 1665 aa18.85■□□□□ 0.61
SNRPD1-204ENST00000582475 ABCA9Q8IUA7 1624 aa18.85■□□□□ 0.61
SNRPD1-204ENST00000582475 TEX14Q8IWB6 1497 aa18.84■□□□□ 0.61
SNRPD1-204ENST00000582475 C1QBPQ07021 282 aaKnown RBP18.83■□□□□ 0.6
SNRPD1-204ENST00000582475 MAP3K1Q13233 1512 aa18.83■□□□□ 0.6
SNRPD1-204ENST00000582475 TIAM1Q13009 1591 aa18.82■□□□□ 0.6
SNRPD1-204ENST00000582475 EFCAB2Q5VUJ9 269 aa18.81■□□□□ 0.6
SNRPD1-204ENST00000582475 PPRC1Q5VV67 1664 aaKnown RBP18.81■□□□□ 0.6
SNRPD1-204ENST00000582475 PLCH2O75038 1416 aa18.81■□□□□ 0.6
SNRPD1-204ENST00000582475 KIF14Q15058 1648 aa18.81■□□□□ 0.6
SNRPD1-204ENST00000582475 LRRC9Q6ZRR7 1453 aa18.79■□□□□ 0.6
SNRPD1-204ENST00000582475 TTC37Q6PGP7 1564 aa18.79■□□□□ 0.6
SNRPD1-204ENST00000582475 PHLDB1Q86UU1 1377 aa18.78■□□□□ 0.6
SNRPD1-204ENST00000582475 EHBP1L1Q8N3D4 1523 aa18.77■□□□□ 0.6
SNRPD1-204ENST00000582475 CCNB3Q8WWL7 1395 aa18.76■□□□□ 0.59
SNRPD1-204ENST00000582475 NEO1Q92859 1461 aa18.74■□□□□ 0.59
SNRPD1-204ENST00000582475 CFDP1Q9UEE9 299 aaPredicted RBP18.74■□□□□ 0.59
SNRPD1-204ENST00000582475 AKNAQ7Z591 1439 aa18.74■□□□□ 0.59
SNRPD1-204ENST00000582475 FANCAO15360 1455 aa18.73■□□□□ 0.59
SNRPD1-204ENST00000582475 GPATCH8Q9UKJ3 1502 aaKnown RBP18.73■□□□□ 0.59
SNRPD1-204ENST00000582475 COL17A1Q9UMD9 1497 aaPredicted RBP18.72■□□□□ 0.59
SNRPD1-204ENST00000582475 ZNF777Q9ULD5 760 aaPredicted RBP18.72■□□□□ 0.59
SNRPD1-204ENST00000582475 NCOA2Q15596 1464 aa18.71■□□□□ 0.59
SNRPD1-204ENST00000582475 RAPGEF3O95398 923 aa18.7■□□□□ 0.58
SNRPD1-204ENST00000582475 ARHGAP5Q13017 1502 aa18.69■□□□□ 0.58
SNRPD1-204ENST00000582475 ARAP3Q8WWN8 1544 aa18.69■□□□□ 0.58
SNRPD1-204ENST00000582475 MYO5CQ9NQX4 1742 aa18.69■□□□□ 0.58
SNRPD1-204ENST00000582475 PPARGC1BQ86YN6 1023 aaKnown RBP18.69■□□□□ 0.58
SNRPD1-204ENST00000582475 KDM6BO15054 1643 aa18.69■□□□□ 0.58
SNRPD1-204ENST00000582475 SUPT6HQ7KZ85 1726 aaKnown RBP18.69■□□□□ 0.58
SNRPD1-204ENST00000582475 SCAPERQ9BY12 1400 aa18.66■□□□□ 0.58
SNRPD1-204ENST00000582475 CDC42BPBQ9Y5S2 1711 aa18.66■□□□□ 0.58
SNRPD1-204ENST00000582475 CDC42BPAQ5VT25 1732 aa18.65■□□□□ 0.58
SNRPD1-204ENST00000582475 DENND4BO75064 1496 aaPredicted RBP18.65■□□□□ 0.58
SNRPD1-204ENST00000582475 ADGRL1O94910 1474 aa18.64■□□□□ 0.57
SNRPD1-204ENST00000582475 CFAP74Q9C0B2 1584 aa18.64■□□□□ 0.57
SNRPD1-204ENST00000582475 PREX2Q70Z35 1606 aa18.63■□□□□ 0.57
SNRPD1-204ENST00000582475 HNRNPMP52272 730 aaKnown RBP eCLIP18.63■□□□□ 0.57
SNRPD1-204ENST00000582475 ZNF644Q9H582 1327 aaPredicted RBP18.63■□□□□ 0.57
SNRPD1-204ENST00000582475 AFAP1Q8N556 730 aa18.62■□□□□ 0.57
SNRPD1-204ENST00000582475 MYOM3Q5VTT5 1437 aa18.58■□□□□ 0.57
SNRPD1-204ENST00000582475 KIAA1107Q9UPP5 1409 aa18.57■□□□□ 0.56
SNRPD1-204ENST00000582475 ARHGEF12Q9NZN5 1544 aa18.57■□□□□ 0.56
SNRPD1-204ENST00000582475 MIA2Q96PC5 1412 aa18.57■□□□□ 0.56
SNRPD1-204ENST00000582475 MYT1LQ9UL68 1186 aa18.56■□□□□ 0.56
SNRPD1-204ENST00000582475 PLEKHH2Q8IVE3 1493 aa18.56■□□□□ 0.56
SNRPD1-204ENST00000582475 ITSN2Q9NZM3 1697 aa18.56■□□□□ 0.56
SNRPD1-204ENST00000582475 TRAPPC8Q9Y2L5 1435 aa18.56■□□□□ 0.56
SNRPD1-204ENST00000582475 RSPH4AQ5TD94 716 aa18.55■□□□□ 0.56
SNRPD1-204ENST00000582475 SAMD9LQ8IVG5 1584 aa18.55■□□□□ 0.56
SNRPD1-204ENST00000582475 POGZQ7Z3K3 1410 aa18.54■□□□□ 0.56
SNRPD1-204ENST00000582475 ABCC1P33527 1531 aa18.53■□□□□ 0.56
SNRPD1-204ENST00000582475 ZNF518AQ6AHZ1 1483 aa18.52■□□□□ 0.55
SNRPD1-204ENST00000582475 U3KPZ7 1027 aaPredicted RBP18.51■□□□□ 0.55
SNRPD1-204ENST00000582475 RICTORQ6R327 1708 aa18.5■□□□□ 0.55
SNRPD1-204ENST00000582475 CAMSAP2Q08AD1 1489 aa18.5■□□□□ 0.55
SNRPD1-204ENST00000582475 MBD5Q9P267 1494 aa18.5■□□□□ 0.55
SNRPD1-204ENST00000582475 FRMPD1Q5SYB0 1578 aa18.5■□□□□ 0.55
SNRPD1-204ENST00000582475 SPAG9O60271 1321 aaKnown RBP18.49■□□□□ 0.55
SNRPD1-204ENST00000582475 FGD6Q6ZV73 1430 aa18.49■□□□□ 0.55
SNRPD1-204ENST00000582475 SYCP2Q9BX26 1530 aa18.49■□□□□ 0.55
SNRPD1-204ENST00000582475 TSPY4P0CV99 314 aa18.49■□□□□ 0.55
SNRPD1-204ENST00000582475 TSPY10P0CW01 314 aa18.49■□□□□ 0.55
SNRPD1-204ENST00000582475 FAM50AQ14320 339 aaKnown RBP18.48■□□□□ 0.55
SNRPD1-204ENST00000582475 MAGI2Q86UL8 1455 aa18.47■□□□□ 0.55
SNRPD1-204ENST00000582475 SLC4A2P04920 1241 aa18.46■□□□□ 0.55
SNRPD1-204ENST00000582475 YEATS2Q9ULM3 1422 aa18.45■□□□□ 0.54
SNRPD1-204ENST00000582475 MLH3Q9UHC1 1453 aa18.45■□□□□ 0.54
SNRPD1-204ENST00000582475 ZMYM4Q5VZL5 1548 aa18.44■□□□□ 0.54
SNRPD1-204ENST00000582475 PTPN23Q9H3S7 1636 aa18.44■□□□□ 0.54
SNRPD1-204ENST00000582475 KDM5CP41229 1560 aa18.43■□□□□ 0.54
SNRPD1-204ENST00000582475 TCOF1Q13428 1488 aaKnown RBP18.43■□□□□ 0.54
SNRPD1-204ENST00000582475 CCDC141Q6ZP82 1450 aa18.42■□□□□ 0.54
SNRPD1-204ENST00000582475 ZFYVE16Q7Z3T8 1539 aa18.42■□□□□ 0.54
SNRPD1-204ENST00000582475 ARID4BQ4LE39 1312 aaPredicted RBP18.41■□□□□ 0.54
SNRPD1-204ENST00000582475 ATP10AO60312 1499 aa18.4■□□□□ 0.54
SNRPD1-204ENST00000582475 RTEL1-TNFRSF6BF6WH68 1400 aa18.4■□□□□ 0.54
SNRPD1-204ENST00000582475 ARHGEF5Q12774 1597 aa18.39■□□□□ 0.53
SNRPD1-204ENST00000582475 ABCC5O15440 1437 aa18.39■□□□□ 0.53
SNRPD1-204ENST00000582475 HECW2Q9P2P5 1572 aa18.38■□□□□ 0.53
SNRPD1-204ENST00000582475 CHIC2Q9UKJ5 165 aa18.37■□□□□ 0.53
SNRPD1-204ENST00000582475 KIDINS220Q9ULH0 1771 aa18.36■□□□□ 0.53
SNRPD1-204ENST00000582475 ARHGEF40Q8TER5 1519 aa18.35■□□□□ 0.53
SNRPD1-204ENST00000582475 DAPK1P53355 1430 aa18.35■□□□□ 0.53
SNRPD1-204ENST00000582475 C9orf84Q5VXU9 1444 aa18.35■□□□□ 0.53
SNRPD1-204ENST00000582475 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.35■□□□□ 0.53
SNRPD1-204ENST00000582475 ATP7AQ04656 1500 aa18.34■□□□□ 0.53
SNRPD1-204ENST00000582475 RRBP1Q9P2E9 1410 aaKnown RBP18.34■□□□□ 0.53
SNRPD1-204ENST00000582475 ITGAEP38570 1179 aa18.34■□□□□ 0.53
SNRPD1-204ENST00000582475 MLECQ14165 292 aa18.33■□□□□ 0.52
SNRPD1-204ENST00000582475 KDM4FA0A1W2PPD8 638 aa18.32■□□□□ 0.52
SNRPD1-204ENST00000582475 RRP7BPQ9NSQ0 103 aa18.32■□□□□ 0.52
SNRPD1-204ENST00000582475 DIP2CQ9Y2E4 1556 aa18.32■□□□□ 0.52
SNRPD1-204ENST00000582475 DHX29Q7Z478 1369 aaKnown RBP18.3■□□□□ 0.52
SNRPD1-204ENST00000582475 INO80Q9ULG1 1556 aaPredicted RBP18.3■□□□□ 0.52
SNRPD1-204ENST00000582475 ABCA6Q8N139 1617 aa18.3■□□□□ 0.52
SNRPD1-204ENST00000582475 A2MP01023 1474 aa18.29■□□□□ 0.52
SNRPD1-204ENST00000582475 DNMT1P26358 1616 aaKnown RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms