RNA–Protein interactions for RNA: ENST00000582182.6

TRIM16-223, Transcript of tripartite motif containing 16, human

TSL 5

Gene TRIM16, Length 581 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM16-223	ENST00000582182	ARSI	Q5FYB1	569 aa		11.02	□□□□□ -0.65
TRIM16-223	ENST00000582182	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	11	□□□□□ -0.65
TRIM16-223	ENST00000582182	ZFP91	Q96JP5	570 aa	Predicted RBP	11	□□□□□ -0.65
TRIM16-223	ENST00000582182	RIOK3	O14730	519 aa	Known RBP	10.99	□□□□□ -0.65
TRIM16-223	ENST00000582182	ANKRD13D	Q6ZTN6	518 aa		10.99	□□□□□ -0.65
TRIM16-223	ENST00000582182	KHSRP	Q92945	711 aa	Known RBP eCLIP	10.99	□□□□□ -0.65
TRIM16-223	ENST00000582182	RNF25	Q96BH1	459 aa	Predicted RBP	10.99	□□□□□ -0.65
TRIM16-223	ENST00000582182	PTGER2	P43116	358 aa		10.98	□□□□□ -0.65
TRIM16-223	ENST00000582182	ZNF316	A6NFI3	1004 aa	Predicted RBP	10.95	□□□□□ -0.66
TRIM16-223	ENST00000582182	NISCH	Q9Y2I1	1504 aa		10.94	□□□□□ -0.66
TRIM16-223	ENST00000582182	VGF	O15240	615 aa	Predicted RBP	10.93	□□□□□ -0.66
TRIM16-223	ENST00000582182	LSM11	P83369	360 aa	Known RBP eCLIP	10.91	□□□□□ -0.66
TRIM16-223	ENST00000582182	NLRP6	P59044	892 aa		10.88	□□□□□ -0.67
TRIM16-223	ENST00000582182	FBXO22	Q8NEZ5	403 aa		10.86	□□□□□ -0.67
TRIM16-223	ENST00000582182	NUDT7	P0C024	238 aa		10.85	□□□□□ -0.67
TRIM16-223	ENST00000582182	BCL11B	Q9C0K0	894 aa	Predicted RBP	10.83	□□□□□ -0.68
TRIM16-223	ENST00000582182	C2orf72	A6NCS6	295 aa		10.82	□□□□□ -0.68
TRIM16-223	ENST00000582182	AXIN2	Q9Y2T1	843 aa		10.82	□□□□□ -0.68
TRIM16-223	ENST00000582182	POTEE	Q6S8J3	1075 aa		10.81	□□□□□ -0.68
TRIM16-223	ENST00000582182	KIF3C	O14782	793 aa		10.8	□□□□□ -0.68
TRIM16-223	ENST00000582182	PBX2	P40425	430 aa		10.8	□□□□□ -0.68
TRIM16-223	ENST00000582182	LHX6	Q9UPM6	363 aa		10.8	□□□□□ -0.68
TRIM16-223	ENST00000582182	MFRP	Q9BY79	579 aa		10.79	□□□□□ -0.68
TRIM16-223	ENST00000582182	STK24	Q9Y6E0	443 aa		10.79	□□□□□ -0.68
TRIM16-223	ENST00000582182	PLA2G2E	Q9NZK7	142 aa		10.77	□□□□□ -0.69
TRIM16-223	ENST00000582182	PCDHGA4	Q9Y5G9	962 aa		10.76	□□□□□ -0.69
TRIM16-223	ENST00000582182	TAOK2	Q9UL54	1235 aa		10.74	□□□□□ -0.69
TRIM16-223	ENST00000582182	SLC34A2	O95436	690 aa		10.72	□□□□□ -0.69
TRIM16-223	ENST00000582182	HCST	Q9UBK5	93 aa		10.72	□□□□□ -0.69
TRIM16-223	ENST00000582182	STK25	O00506	426 aa		10.71	□□□□□ -0.69
TRIM16-223	ENST00000582182	ADGRD1	Q6QNK2	874 aa		10.69	□□□□□ -0.7
TRIM16-223	ENST00000582182	TMC2	Q8TDI7	906 aa		10.69	□□□□□ -0.7
TRIM16-223	ENST00000582182	ARHGAP33	O14559	1287 aa		10.67	□□□□□ -0.7
TRIM16-223	ENST00000582182	PSD	A5PKW4	1024 aa	Predicted RBP	10.62	□□□□□ -0.71
TRIM16-223	ENST00000582182	DMRTA1	Q5VZB9	504 aa		10.62	□□□□□ -0.71
TRIM16-223	ENST00000582182	PSEN2	P49810	448 aa		10.61	□□□□□ -0.71
TRIM16-223	ENST00000582182	HR	O43593	1189 aa		10.6	□□□□□ -0.71
TRIM16-223	ENST00000582182	PPP1R37	O75864	691 aa		10.59	□□□□□ -0.71
TRIM16-223	ENST00000582182	ECM2	O94769	699 aa	Predicted RBP	10.59	□□□□□ -0.71
TRIM16-223	ENST00000582182	KDM4F	A0A1W2PPD8	638 aa		10.58	□□□□□ -0.72
TRIM16-223	ENST00000582182	TK2	O00142	265 aa		10.58	□□□□□ -0.72
TRIM16-223	ENST00000582182	KCTD12	Q96CX2	325 aa	Known RBP	10.58	□□□□□ -0.72
TRIM16-223	ENST00000582182	PTCD2	Q8WV60	388 aa	Known RBP	10.55	□□□□□ -0.72
TRIM16-223	ENST00000582182	RGL2	O15211	777 aa		10.53	□□□□□ -0.72
TRIM16-223	ENST00000582182	PPP4R3B	Q5MIZ7	849 aa		10.53	□□□□□ -0.72
TRIM16-223	ENST00000582182	STAC3	Q96MF2	364 aa		10.53	□□□□□ -0.72
TRIM16-223	ENST00000582182	PLPP6	Q8IY26	295 aa		10.51	□□□□□ -0.73
TRIM16-223	ENST00000582182	KCNK17	Q96T54	332 aa		10.5	□□□□□ -0.73
TRIM16-223	ENST00000582182	FOXK1	P85037	733 aa		10.49	□□□□□ -0.73
TRIM16-223	ENST00000582182	PTPN5	P54829	565 aa		10.47	□□□□□ -0.73
TRIM16-223	ENST00000582182	PKD2	Q13563	968 aa		10.46	□□□□□ -0.73
TRIM16-223	ENST00000582182	DSG2	Q14126	1118 aa		10.46	□□□□□ -0.73
TRIM16-223	ENST00000582182	TBC1D12	O60347	775 aa		10.45	□□□□□ -0.74
TRIM16-223	ENST00000582182	KCNH8	Q96L42	1107 aa		10.45	□□□□□ -0.74
TRIM16-223	ENST00000582182	GPHN	Q9NQX3	736 aa	Predicted RBP	10.44	□□□□□ -0.74
TRIM16-223	ENST00000582182	VPS9D1	Q9Y2B5	631 aa		10.43	□□□□□ -0.74
TRIM16-223	ENST00000582182	ZNF454	Q8N9F8	522 aa		10.37	□□□□□ -0.75
TRIM16-223	ENST00000582182	UPF1	Q92900	1129 aa	Known RBP eCLIP	10.37	□□□□□ -0.75
TRIM16-223	ENST00000582182	RGS20	O76081	388 aa		10.35	□□□□□ -0.75
TRIM16-223	ENST00000582182	THSD4	Q6ZMP0	1018 aa		10.35	□□□□□ -0.75
TRIM16-223	ENST00000582182	OXER1	Q8TDS5	423 aa		10.35	□□□□□ -0.75
TRIM16-223	ENST00000582182	IRX2	Q9BZI1	471 aa	Predicted RBP	10.35	□□□□□ -0.75
TRIM16-223	ENST00000582182	IFFO2	Q5TF58	517 aa		10.34	□□□□□ -0.75
TRIM16-223	ENST00000582182	BCL2L12	Q9HB09	334 aa		10.34	□□□□□ -0.75
TRIM16-223	ENST00000582182	SLC4A5	Q9BY07	1137 aa		10.33	□□□□□ -0.76
TRIM16-223	ENST00000582182		A0A0G2JS52	829 aa		10.32	□□□□□ -0.76
TRIM16-223	ENST00000582182	GOLGA8CP	A6NN73	597 aa		10.32	□□□□□ -0.76
TRIM16-223	ENST00000582182	BHMG1	C9JSJ3	638 aa	Predicted RBP	10.32	□□□□□ -0.76
TRIM16-223	ENST00000582182	WNT2B	Q93097	391 aa		10.32	□□□□□ -0.76
TRIM16-223	ENST00000582182	PTPRE	P23469	700 aa		10.3	□□□□□ -0.76
TRIM16-223	ENST00000582182	FOSB	P53539	338 aa		10.29	□□□□□ -0.76
TRIM16-223	ENST00000582182	HS6ST3	Q8IZP7	471 aa		10.29	□□□□□ -0.76
TRIM16-223	ENST00000582182	MRPL50	Q8N5N7	158 aa	Known RBP	10.29	□□□□□ -0.76
TRIM16-223	ENST00000582182	ZBED2	Q9BTP6	218 aa		10.29	□□□□□ -0.76
TRIM16-223	ENST00000582182	PPP1R15B	Q5SWA1	713 aa		10.25	□□□□□ -0.77
TRIM16-223	ENST00000582182	CRISPLD2	Q9H0B8	497 aa		10.24	□□□□□ -0.77
TRIM16-223	ENST00000582182	JPH4	Q96JJ6	628 aa		10.22	□□□□□ -0.77
TRIM16-223	ENST00000582182	ADAM33	Q9BZ11	813 aa		10.22	□□□□□ -0.77
TRIM16-223	ENST00000582182	NBPF3	Q9H094	633 aa		10.22	□□□□□ -0.77
TRIM16-223	ENST00000582182	CHGA	P10645	457 aa	Known RBP	10.21	□□□□□ -0.77
TRIM16-223	ENST00000582182	EVI5	O60447	810 aa		10.2	□□□□□ -0.78
TRIM16-223	ENST00000582182	ZDHHC16	Q969W1	377 aa		10.2	□□□□□ -0.78
TRIM16-223	ENST00000582182	ANO8	Q9HCE9	1232 aa	Predicted RBP	10.2	□□□□□ -0.78
TRIM16-223	ENST00000582182	NKX1-1	Q15270	411 aa	Predicted RBP	10.18	□□□□□ -0.78
TRIM16-223	ENST00000582182	NCKAP5L	Q9HCH0	1330 aa		10.16	□□□□□ -0.78
TRIM16-223	ENST00000582182	ITGBL1	O95965	494 aa	Predicted RBP	10.14	□□□□□ -0.79
TRIM16-223	ENST00000582182	PROX2	Q3B8N5	592 aa		10.14	□□□□□ -0.79
TRIM16-223	ENST00000582182	ANKK1	Q8NFD2	765 aa		10.14	□□□□□ -0.79
TRIM16-223	ENST00000582182	PPP1R3G	B7ZBB8	358 aa		10.13	□□□□□ -0.79
TRIM16-223	ENST00000582182	PDE4A	P27815	886 aa		10.13	□□□□□ -0.79
TRIM16-223	ENST00000582182	BCAM	P50895	628 aa		10.13	□□□□□ -0.79
TRIM16-223	ENST00000582182		Q6ZNB5	142 aa		10.13	□□□□□ -0.79
TRIM16-223	ENST00000582182	RABGEF1	Q9UJ41	708 aa		10.12	□□□□□ -0.79
TRIM16-223	ENST00000582182	COL9A1	P20849	921 aa		10.11	□□□□□ -0.79
TRIM16-223	ENST00000582182	MAP3K9	P80192	1104 aa		10.11	□□□□□ -0.79
TRIM16-223	ENST00000582182	RYDEN	Q9NUL5	291 aa	Known RBP	10.11	□□□□□ -0.79
TRIM16-223	ENST00000582182	DNAJC5	Q9H3Z4	198 aa		10.1	□□□□□ -0.79
TRIM16-223	ENST00000582182	LARP6	Q9BRS8	491 aa	Known RBP	10.09	□□□□□ -0.79
TRIM16-223	ENST00000582182	PCDHGA10	Q9Y5H3	936 aa		10.09	□□□□□ -0.79
TRIM16-223	ENST00000582182	SOWAHB	A6NEL2	793 aa		10.07	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms